RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 NXPH4O95158 308 aa3.28□□□□□ -1.88
SKP1-212ENST00000523966 POP4O95707 220 aaKnown RBP3.28□□□□□ -1.88
SKP1-212ENST00000523966 SERPINB2P05120 415 aa3.28□□□□□ -1.88
SKP1-212ENST00000523966 SERPINF2P08697 491 aa3.28□□□□□ -1.88
SKP1-212ENST00000523966 CCDC192P0DO97 292 aa3.28□□□□□ -1.88
SKP1-212ENST00000523966 EDNRAP25101 427 aa3.28□□□□□ -1.88
SKP1-212ENST00000523966 RIDAP52758 137 aaKnown RBP3.28□□□□□ -1.88
SKP1-212ENST00000523966 ADARP55265 1226 aaKnown RBP3.28□□□□□ -1.88
SKP1-212ENST00000523966 SRPXP78539 464 aa3.28□□□□□ -1.88
SKP1-212ENST00000523966 CCZ1BP86790 482 aa3.28□□□□□ -1.88
SKP1-212ENST00000523966 CCZ1P86791 482 aaPredicted RBP3.28□□□□□ -1.88
SKP1-212ENST00000523966 FKBP3Q00688 224 aaKnown RBP3.28□□□□□ -1.88
SKP1-212ENST00000523966 WASHC5Q12768 1159 aa3.28□□□□□ -1.88
SKP1-212ENST00000523966 GK2Q14410 553 aaPredicted RBP3.28□□□□□ -1.88
SKP1-212ENST00000523966 MEF2DQ14814 521 aa3.28□□□□□ -1.88
SKP1-212ENST00000523966 LASP1Q14847 261 aaKnown RBP3.28□□□□□ -1.88
SKP1-212ENST00000523966 CDC37Q16543 378 aaPredicted RBP3.28□□□□□ -1.88
SKP1-212ENST00000523966 UPP1Q16831 310 aa3.28□□□□□ -1.88
SKP1-212ENST00000523966 C14orf177Q52M58 125 aa3.28□□□□□ -1.88
SKP1-212ENST00000523966 MPPE1Q53F39 396 aa3.28□□□□□ -1.88
SKP1-212ENST00000523966 MCM10Q7L590 875 aa3.28□□□□□ -1.88
SKP1-212ENST00000523966 MIER3Q7Z3K6 550 aa3.28□□□□□ -1.88
SKP1-212ENST00000523966 RNF130Q86XS8 419 aa3.28□□□□□ -1.88
SKP1-212ENST00000523966 BATF2Q8N1L9 274 aa3.28□□□□□ -1.88
SKP1-212ENST00000523966 CHCHD4Q8N4Q1 142 aa3.28□□□□□ -1.88
SKP1-212ENST00000523966 Q8NBF4 154 aa3.28□□□□□ -1.88
SKP1-212ENST00000523966 OR6M1Q8NGM8 313 aa3.28□□□□□ -1.88
SKP1-212ENST00000523966 RNASE8Q8TDE3 154 aaKnown RBP3.28□□□□□ -1.88
SKP1-212ENST00000523966 LRRC15Q8TF66 581 aa3.28□□□□□ -1.88
SKP1-212ENST00000523966 GLYATL1Q969I3 302 aa3.28□□□□□ -1.88
SKP1-212ENST00000523966 ESAMQ96AP7 390 aa3.28□□□□□ -1.88
SKP1-212ENST00000523966 PCED1BQ96HM7 432 aa3.28□□□□□ -1.88
SKP1-212ENST00000523966 C18orf12Q96KH6 178 aa3.28□□□□□ -1.88
SKP1-212ENST00000523966 PRICKLE1Q96MT3 831 aaPredicted RBP3.28□□□□□ -1.88
SKP1-212ENST00000523966 ZNF599Q96NL3 588 aa3.28□□□□□ -1.88
SKP1-212ENST00000523966 PRAM1Q96QH2 718 aa3.28□□□□□ -1.88
SKP1-212ENST00000523966 TNFRSF13CQ96RJ3 184 aa3.28□□□□□ -1.88
SKP1-212ENST00000523966 LRRC61Q9BV99 259 aa3.28□□□□□ -1.88
SKP1-212ENST00000523966 FUNDC2Q9BWH2 189 aa3.28□□□□□ -1.88
SKP1-212ENST00000523966 WWP1Q9H0M0 922 aa3.28□□□□□ -1.88
SKP1-212ENST00000523966 PNNQ9H307 717 aaKnown RBP3.28□□□□□ -1.88
SKP1-212ENST00000523966 FNDC4Q9H6D8 234 aaPredicted RBP3.28□□□□□ -1.88
SKP1-212ENST00000523966 WDR41Q9HAD4 459 aa3.28□□□□□ -1.88
SKP1-212ENST00000523966 PRMT8Q9NR22 394 aaPredicted RBP3.28□□□□□ -1.88
SKP1-212ENST00000523966 GDF3Q9NR23 364 aa3.28□□□□□ -1.88
SKP1-212ENST00000523966 DDX28Q9NUL7 540 aaKnown RBP3.28□□□□□ -1.88
SKP1-212ENST00000523966 CYP39A1Q9NYL5 469 aa3.28□□□□□ -1.88
SKP1-212ENST00000523966 APPL1Q9UKG1 709 aa3.28□□□□□ -1.88
SKP1-212ENST00000523966 MGAT4AQ9UM21 535 aa3.28□□□□□ -1.88
SKP1-212ENST00000523966 MRPS2Q9Y399 296 aaKnown RBP3.28□□□□□ -1.88
SKP1-212ENST00000523966 STRAPQ9Y3F4 350 aaKnown RBP3.28□□□□□ -1.88
SKP1-212ENST00000523966 CEP170Q5SW79 1584 aa3.28□□□□□ -1.88
SKP1-212ENST00000523966 PRG4Q92954 1404 aaPredicted RBP3.27□□□□□ -1.89
SKP1-212ENST00000523966 KIAA0556O60303 1618 aa3.27□□□□□ -1.89
SKP1-212ENST00000523966 HECW1Q76N89 1606 aa3.27□□□□□ -1.89
SKP1-212ENST00000523966 CLSPNQ9HAW4 1339 aa3.27□□□□□ -1.89
SKP1-212ENST00000523966 PCF11O94913 1555 aaKnown RBP3.27□□□□□ -1.89
SKP1-212ENST00000523966 A8MU76 341 aa3.27□□□□□ -1.89
SKP1-212ENST00000523966 ANHXE9PGG2 379 aa3.27□□□□□ -1.89
SKP1-212ENST00000523966 VEGFDO43915 354 aa3.27□□□□□ -1.89
SKP1-212ENST00000523966 CSO75390 466 aaKnown RBP3.27□□□□□ -1.89
SKP1-212ENST00000523966 ANXA9O76027 345 aa3.27□□□□□ -1.89
SKP1-212ENST00000523966 SORBS2O94875 1100 aaKnown RBP3.27□□□□□ -1.89
SKP1-212ENST00000523966 STBD1O95210 358 aa3.27□□□□□ -1.89
SKP1-212ENST00000523966 ABHD2P08910 425 aa3.27□□□□□ -1.89
SKP1-212ENST00000523966 ZNF10P21506 573 aaPredicted RBP3.27□□□□□ -1.89
SKP1-212ENST00000523966 OR1D2P34982 312 aa3.27□□□□□ -1.89
SKP1-212ENST00000523966 ZFP36L2P47974 494 aaKnown RBP3.27□□□□□ -1.89
SKP1-212ENST00000523966 VEGFCP49767 419 aa3.27□□□□□ -1.89
SKP1-212ENST00000523966 SSTP61278 116 aa3.27□□□□□ -1.89
SKP1-212ENST00000523966 HERV-K104P63124 156 aa3.27□□□□□ -1.89
SKP1-212ENST00000523966 GSTO1P78417 241 aa3.27□□□□□ -1.89
SKP1-212ENST00000523966 HSPA14Q0VDF9 509 aa3.27□□□□□ -1.89
SKP1-212ENST00000523966 NFATC2Q13469 925 aa3.27□□□□□ -1.89
SKP1-212ENST00000523966 RAPSNQ13702 412 aa3.27□□□□□ -1.89
SKP1-212ENST00000523966 FASTKQ14296 549 aaKnown RBP3.27□□□□□ -1.89
SKP1-212ENST00000523966 ZNF146Q15072 292 aa3.27□□□□□ -1.89
SKP1-212ENST00000523966 OR1C1Q15619 314 aa3.27□□□□□ -1.89
SKP1-212ENST00000523966 HFEQ30201 348 aa3.27□□□□□ -1.89
SKP1-212ENST00000523966 ZNF772Q68DY9 489 aaPredicted RBP3.27□□□□□ -1.89
SKP1-212ENST00000523966 HIST2H2AA3Q6FI13 130 aa3.27□□□□□ -1.89
SKP1-212ENST00000523966 ZNF497Q6ZNH5 498 aa3.27□□□□□ -1.89
SKP1-212ENST00000523966 FAM131BQ86XD5 332 aa3.27□□□□□ -1.89
SKP1-212ENST00000523966 OR4N5Q8IXE1 308 aa3.27□□□□□ -1.89
SKP1-212ENST00000523966 BANPQ8N9N5 519 aa3.27□□□□□ -1.89
SKP1-212ENST00000523966 SPATA3Q8NHX4 192 aa3.27□□□□□ -1.89
SKP1-212ENST00000523966 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.27□□□□□ -1.89
SKP1-212ENST00000523966 PSMB7Q99436 277 aa3.27□□□□□ -1.89
SKP1-212ENST00000523966 CHCHD5Q9BSY4 110 aa3.27□□□□□ -1.89
SKP1-212ENST00000523966 NUSAP1Q9BXS6 441 aaKnown RBP3.27□□□□□ -1.89
SKP1-212ENST00000523966 NACA2Q9H009 215 aa3.27□□□□□ -1.89
SKP1-212ENST00000523966 SLC26A1Q9H2B4 701 aa3.27□□□□□ -1.89
SKP1-212ENST00000523966 MOB1AQ9H8S9 216 aa3.27□□□□□ -1.89
SKP1-212ENST00000523966 HOMER3Q9NSC5 361 aa3.27□□□□□ -1.89
SKP1-212ENST00000523966 PIGVQ9NUD9 493 aa3.27□□□□□ -1.89
SKP1-212ENST00000523966 ANO10Q9NW15 660 aa3.27□□□□□ -1.89
SKP1-212ENST00000523966 NDUFA13Q9P0J0 144 aa3.27□□□□□ -1.89
SKP1-212ENST00000523966 COPS7AQ9UBW8 275 aa3.27□□□□□ -1.89
SKP1-212ENST00000523966 ASIC3Q9UHC3 531 aa3.27□□□□□ -1.89
SKP1-212ENST00000523966 IL19Q9UHD0 177 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms