RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 ZNF721Q8TF20 911 aa12.61□□□□□ -0.39
NKX3-1-202ENST00000523261 STARD4Q96DR4 205 aa12.61□□□□□ -0.39
NKX3-1-202ENST00000523261 TRMT61AQ96FX7 289 aaKnown RBP12.61□□□□□ -0.39
NKX3-1-202ENST00000523261 TCF12Q99081 682 aa12.61□□□□□ -0.39
NKX3-1-202ENST00000523261 HAUS8Q9BT25 410 aa12.61□□□□□ -0.39
NKX3-1-202ENST00000523261 G6PC3Q9BUM1 346 aa12.61□□□□□ -0.39
NKX3-1-202ENST00000523261 NPLQ9BXD5 320 aaPredicted RBP12.61□□□□□ -0.39
NKX3-1-202ENST00000523261 ALOXE3Q9BYJ1 711 aa12.61□□□□□ -0.39
NKX3-1-202ENST00000523261 NAT10Q9H0A0 1025 aaKnown RBP12.61□□□□□ -0.39
NKX3-1-202ENST00000523261 ETNK1Q9HBU6 452 aa12.61□□□□□ -0.39
NKX3-1-202ENST00000523261 CLCF1Q9UBD9 225 aa12.61□□□□□ -0.39
NKX3-1-202ENST00000523261 MRPS33Q9Y291 106 aaKnown RBP12.61□□□□□ -0.39
NKX3-1-202ENST00000523261 C15orf41Q9Y2V0 281 aa12.61□□□□□ -0.39
NKX3-1-202ENST00000523261 KLF4O43474 513 aa12.6□□□□□ -0.39
NKX3-1-202ENST00000523261 CTNSO60931 367 aa12.6□□□□□ -0.39
NKX3-1-202ENST00000523261 SMNDC1O75940 238 aaKnown RBP eCLIP12.6□□□□□ -0.39
NKX3-1-202ENST00000523261 VAPBO95292 243 aa12.6□□□□□ -0.39
NKX3-1-202ENST00000523261 ETHE1O95571 254 aa12.6□□□□□ -0.39
NKX3-1-202ENST00000523261 PGRP06401 933 aa12.6□□□□□ -0.39
NKX3-1-202ENST00000523261 THBS1P07996 1170 aa12.6□□□□□ -0.39
NKX3-1-202ENST00000523261 CPN1P15169 458 aa12.6□□□□□ -0.39
NKX3-1-202ENST00000523261 EGR1P18146 543 aa12.6□□□□□ -0.39
NKX3-1-202ENST00000523261 CRADDP78560 199 aa12.6□□□□□ -0.39
NKX3-1-202ENST00000523261 TMEM249Q2WGJ8 235 aa12.6□□□□□ -0.39
NKX3-1-202ENST00000523261 BEX5Q5H9J7 111 aa12.6□□□□□ -0.39
NKX3-1-202ENST00000523261 TOR1AIP1Q5JTV8 583 aa12.6□□□□□ -0.39
NKX3-1-202ENST00000523261 TBCELQ5QJ74 424 aa12.6□□□□□ -0.39
NKX3-1-202ENST00000523261 AADACL2Q6P093 401 aa12.6□□□□□ -0.39
NKX3-1-202ENST00000523261 MILR1Q7Z6M3 343 aa12.6□□□□□ -0.39
NKX3-1-202ENST00000523261 KIAA1328Q86T90 577 aa12.6□□□□□ -0.39
NKX3-1-202ENST00000523261 MEX3DQ86XN8 651 aaKnown RBP12.6□□□□□ -0.39
NKX3-1-202ENST00000523261 C9orf40Q8IXQ3 194 aa12.6□□□□□ -0.39
NKX3-1-202ENST00000523261 DND1Q8IYX4 353 aaKnown RBP12.6□□□□□ -0.39
NKX3-1-202ENST00000523261 TRPV3Q8NET8 790 aa12.6□□□□□ -0.39
NKX3-1-202ENST00000523261 UCN3Q969E3 161 aa12.6□□□□□ -0.39
NKX3-1-202ENST00000523261 RUNDC3BQ96NL0 473 aa12.6□□□□□ -0.39
NKX3-1-202ENST00000523261 GNRHR2Q96P88 292 aa12.6□□□□□ -0.39
NKX3-1-202ENST00000523261 OR4K3Q96R72 315 aa12.6□□□□□ -0.39
NKX3-1-202ENST00000523261 COPS7AQ9UBW8 275 aa12.6□□□□□ -0.39
NKX3-1-202ENST00000523261 ADAMTS6Q9UKP5 1117 aa12.6□□□□□ -0.39
NKX3-1-202ENST00000523261 AMFRQ9UKV5 643 aa12.6□□□□□ -0.39
NKX3-1-202ENST00000523261 INTUQ9ULD6 942 aa12.6□□□□□ -0.39
NKX3-1-202ENST00000523261 PDE10AQ9Y233 779 aa12.6□□□□□ -0.39
NKX3-1-202ENST00000523261 A0A0G2JN53 185 aa12.59□□□□□ -0.39
NKX3-1-202ENST00000523261 C16orf97H3BN30 126 aa12.59□□□□□ -0.39
NKX3-1-202ENST00000523261 CYR61O00622 381 aa12.59□□□□□ -0.39
NKX3-1-202ENST00000523261 PFDN6O15212 129 aa12.59□□□□□ -0.39
NKX3-1-202ENST00000523261 TJP3O95049 919 aa12.59□□□□□ -0.39
NKX3-1-202ENST00000523261 ACTL6AO96019 429 aa12.59□□□□□ -0.39
NKX3-1-202ENST00000523261 IGHV4-39P01824 125 aa12.59□□□□□ -0.39
NKX3-1-202ENST00000523261 THBDP07204 575 aa12.59□□□□□ -0.39
NKX3-1-202ENST00000523261 SERPINA6P08185 405 aa12.59□□□□□ -0.39
NKX3-1-202ENST00000523261 POU2F1P14859 743 aa12.59□□□□□ -0.39
NKX3-1-202ENST00000523261 SRD5A1P18405 259 aa12.59□□□□□ -0.39
NKX3-1-202ENST00000523261 TNNI3P19429 210 aa12.59□□□□□ -0.39
NKX3-1-202ENST00000523261 SERPINB3P29508 390 aa12.59□□□□□ -0.39
NKX3-1-202ENST00000523261 CTNNA1P35221 906 aaKnown RBP12.59□□□□□ -0.39
NKX3-1-202ENST00000523261 RPL22P35268 128 aaKnown RBP12.59□□□□□ -0.39
NKX3-1-202ENST00000523261 RPL21P46778 160 aaKnown RBP12.59□□□□□ -0.39
NKX3-1-202ENST00000523261 IQCB1Q15051 598 aa12.59□□□□□ -0.39
NKX3-1-202ENST00000523261 NTRK2Q16620 822 aa12.59□□□□□ -0.39
NKX3-1-202ENST00000523261 PDLIM3Q53GG5 364 aaPredicted RBP12.59□□□□□ -0.39
NKX3-1-202ENST00000523261 BICRALQ6AI39 1079 aa12.59□□□□□ -0.39
NKX3-1-202ENST00000523261 C11orf63Q6NUN7 778 aa12.59□□□□□ -0.39
NKX3-1-202ENST00000523261 CENPUQ71F23 418 aa12.59□□□□□ -0.39
NKX3-1-202ENST00000523261 CAVIN3Q969G5 261 aa12.59□□□□□ -0.39
NKX3-1-202ENST00000523261 PYCR2Q96C36 320 aa12.59□□□□□ -0.39
NKX3-1-202ENST00000523261 SNF8Q96H20 258 aa12.59□□□□□ -0.39
NKX3-1-202ENST00000523261 CSF3RQ99062 836 aa12.59□□□□□ -0.39
NKX3-1-202ENST00000523261 CHP1Q99653 195 aa12.59□□□□□ -0.39
NKX3-1-202ENST00000523261 TMEM204Q9BSN7 226 aa12.59□□□□□ -0.39
NKX3-1-202ENST00000523261 ESRP2Q9H6T0 727 aaKnown RBP12.59□□□□□ -0.39
NKX3-1-202ENST00000523261 LMBRD1Q9NUN5 540 aa12.59□□□□□ -0.39
NKX3-1-202ENST00000523261 ELOVL5Q9NYP7 299 aa12.59□□□□□ -0.39
NKX3-1-202ENST00000523261 FETUBQ9UGM5 382 aa12.59□□□□□ -0.39
NKX3-1-202ENST00000523261 FRG2CA6NGY1 282 aa12.58□□□□□ -0.4
NKX3-1-202ENST00000523261 H0Y3Z8 333 aa12.58□□□□□ -0.4
NKX3-1-202ENST00000523261 EIF3FO00303 357 aaPredicted RBP12.58□□□□□ -0.4
NKX3-1-202ENST00000523261 IGKV3-11P04433 115 aa12.58□□□□□ -0.4
NKX3-1-202ENST00000523261 FDFT1P37268 417 aa12.58□□□□□ -0.4
NKX3-1-202ENST00000523261 CDKN1AP38936 164 aa12.58□□□□□ -0.4
NKX3-1-202ENST00000523261 CASP9P55211 416 aa12.58□□□□□ -0.4
NKX3-1-202ENST00000523261 VLDLRP98155 873 aa12.58□□□□□ -0.4
NKX3-1-202ENST00000523261 REEP5Q00765 189 aa12.58□□□□□ -0.4
NKX3-1-202ENST00000523261 CTBP1Q13363 440 aa12.58□□□□□ -0.4
NKX3-1-202ENST00000523261 TOMM20Q15388 145 aa12.58□□□□□ -0.4
NKX3-1-202ENST00000523261 LIPNQ5VXI9 398 aa12.58□□□□□ -0.4
NKX3-1-202ENST00000523261 ANKRD34AQ69YU3 496 aa12.58□□□□□ -0.4
NKX3-1-202ENST00000523261 VWA1Q6PCB0 445 aa12.58□□□□□ -0.4
NKX3-1-202ENST00000523261 C12orf54Q6X4T0 127 aa12.58□□□□□ -0.4
NKX3-1-202ENST00000523261 CPNE9Q8IYJ1 553 aa12.58□□□□□ -0.4
NKX3-1-202ENST00000523261 ARIH2OSQ8N7S6 290 aa12.58□□□□□ -0.4
NKX3-1-202ENST00000523261 SLC35B2Q8TB61 432 aa12.58□□□□□ -0.4
NKX3-1-202ENST00000523261 DIO2Q92813 273 aa12.58□□□□□ -0.4
NKX3-1-202ENST00000523261 GAL3ST3Q96A11 431 aa12.58□□□□□ -0.4
NKX3-1-202ENST00000523261 MFSD3Q96ES6 412 aa12.58□□□□□ -0.4
NKX3-1-202ENST00000523261 PGM2Q96G03 612 aa12.58□□□□□ -0.4
NKX3-1-202ENST00000523261 FAR2Q96K12 515 aa12.58□□□□□ -0.4
NKX3-1-202ENST00000523261 RILPQ96NA2 401 aa12.58□□□□□ -0.4
NKX3-1-202ENST00000523261 DNAJC7Q99615 494 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms