RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 PHACTR1Q9C0D0 580 aa14.25□□□□□ -0.13
MRPS28-209ENST00000522987 EHD1Q9H4M9 534 aa14.25□□□□□ -0.13
MRPS28-209ENST00000522987 LYRM4Q9HD34 91 aa14.25□□□□□ -0.13
MRPS28-209ENST00000522987 SPRR3Q9UBC9 169 aa14.25□□□□□ -0.13
MRPS28-209ENST00000522987 COPS7AQ9UBW8 275 aa14.25□□□□□ -0.13
MRPS28-209ENST00000522987 Q9UFV3 132 aa14.25□□□□□ -0.13
MRPS28-209ENST00000522987 ATG4BQ9Y4P1 393 aa14.25□□□□□ -0.13
MRPS28-209ENST00000522987 SAR1BQ9Y6B6 198 aa14.25□□□□□ -0.13
MRPS28-209ENST00000522987 TCRBV9S1A1TA0A576 114 aa14.24□□□□□ -0.13
MRPS28-209ENST00000522987 GLOD5A6NK44 160 aa14.24□□□□□ -0.13
MRPS28-209ENST00000522987 FIGNL2A6NMB9 653 aa14.24□□□□□ -0.13
MRPS28-209ENST00000522987 RFPL3SP0C7P2 107 aa14.24□□□□□ -0.13
MRPS28-209ENST00000522987 HPDP32754 393 aaPredicted RBP14.24□□□□□ -0.13
MRPS28-209ENST00000522987 PAFAH1B1P43034 410 aa14.24□□□□□ -0.13
MRPS28-209ENST00000522987 RAP1GDS1P52306 607 aa14.24□□□□□ -0.13
MRPS28-209ENST00000522987 WNT3P56703 355 aa14.24□□□□□ -0.13
MRPS28-209ENST00000522987 RAB10P61026 200 aa14.24□□□□□ -0.13
MRPS28-209ENST00000522987 ATP6V0D1P61421 351 aa14.24□□□□□ -0.13
MRPS28-209ENST00000522987 FOXO1Q12778 655 aa14.24□□□□□ -0.13
MRPS28-209ENST00000522987 LAPTM5Q13571 262 aa14.24□□□□□ -0.13
MRPS28-209ENST00000522987 SLC10A1Q14973 349 aa14.24□□□□□ -0.13
MRPS28-209ENST00000522987 PAGE2BQ5JRK9 111 aa14.24□□□□□ -0.13
MRPS28-209ENST00000522987 NDUFAF5Q5TEU4 345 aa14.24□□□□□ -0.13
MRPS28-209ENST00000522987 MED27Q6P2C8 311 aa14.24□□□□□ -0.13
MRPS28-209ENST00000522987 OPN5Q6U736 354 aa14.24□□□□□ -0.13
MRPS28-209ENST00000522987 TMEM64Q6YI46 380 aa14.24□□□□□ -0.13
MRPS28-209ENST00000522987 B3GNT6Q6ZMB0 384 aa14.24□□□□□ -0.13
MRPS28-209ENST00000522987 RAPH1Q70E73 1250 aa14.24□□□□□ -0.13
MRPS28-209ENST00000522987 WDR53Q7Z5U6 358 aaPredicted RBP14.24□□□□□ -0.13
MRPS28-209ENST00000522987 CCDC25Q86WR0 208 aa14.24□□□□□ -0.13
MRPS28-209ENST00000522987 PPM1NQ8N819 430 aa14.24□□□□□ -0.13
MRPS28-209ENST00000522987 FAM13CQ8NE31 585 aa14.24□□□□□ -0.13
MRPS28-209ENST00000522987 OR5L2Q8NGL0 311 aa14.24□□□□□ -0.13
MRPS28-209ENST00000522987 CDKL2Q92772 493 aa14.24□□□□□ -0.13
MRPS28-209ENST00000522987 UCN3Q969E3 161 aa14.24□□□□□ -0.13
MRPS28-209ENST00000522987 MRRFQ96E11 262 aaKnown RBP14.24□□□□□ -0.13
MRPS28-209ENST00000522987 WDR34Q96EX3 536 aa14.24□□□□□ -0.13
MRPS28-209ENST00000522987 SENP5Q96HI0 755 aaPredicted RBP14.24□□□□□ -0.13
MRPS28-209ENST00000522987 MTERF1Q99551 399 aaKnown RBP14.24□□□□□ -0.13
MRPS28-209ENST00000522987 NAPGQ99747 312 aaPredicted RBP14.24□□□□□ -0.13
MRPS28-209ENST00000522987 CPNE1Q99829 537 aa14.24□□□□□ -0.13
MRPS28-209ENST00000522987 PITHD1Q9GZP4 211 aaPredicted RBP14.24□□□□□ -0.13
MRPS28-209ENST00000522987 SLC6A15Q9H2J7 730 aa14.24□□□□□ -0.13
MRPS28-209ENST00000522987 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.24□□□□□ -0.13
MRPS28-209ENST00000522987 SPACA6W5XKT8 324 aa14.24□□□□□ -0.13
MRPS28-209ENST00000522987 LRRC14BA6NHZ5 514 aa14.23□□□□□ -0.13
MRPS28-209ENST00000522987 FOXO6A8MYZ6 492 aa14.23□□□□□ -0.13
MRPS28-209ENST00000522987 CCDC188H7C350 402 aa14.23□□□□□ -0.13
MRPS28-209ENST00000522987 BCKDKO14874 412 aa14.23□□□□□ -0.13
MRPS28-209ENST00000522987 KLK8O60259 260 aa14.23□□□□□ -0.13
MRPS28-209ENST00000522987 ZWINTO95229 277 aa14.23□□□□□ -0.13
MRPS28-209ENST00000522987 NADKO95544 446 aaPredicted RBP14.23□□□□□ -0.13
MRPS28-209ENST00000522987 IGHG3P01860 377 aa14.23□□□□□ -0.13
MRPS28-209ENST00000522987 HOXD4P09016 255 aaPredicted RBP14.23□□□□□ -0.13
MRPS28-209ENST00000522987 COX7A2P14406 83 aa14.23□□□□□ -0.13
MRPS28-209ENST00000522987 ENDOUP21128 410 aaKnown RBP14.23□□□□□ -0.13
MRPS28-209ENST00000522987 GP5P40197 560 aa14.23□□□□□ -0.13
MRPS28-209ENST00000522987 ZFP36L2P47974 494 aaKnown RBP14.23□□□□□ -0.13
MRPS28-209ENST00000522987 HNRNPH2P55795 449 aaKnown RBP14.23□□□□□ -0.13
MRPS28-209ENST00000522987 DLX5P56178 289 aa14.23□□□□□ -0.13
MRPS28-209ENST00000522987 GPX6P59796 221 aa14.23□□□□□ -0.13
MRPS28-209ENST00000522987 HERVK_113P63132 956 aa14.23□□□□□ -0.13
MRPS28-209ENST00000522987 ERVK-8P63133 956 aa14.23□□□□□ -0.13
MRPS28-209ENST00000522987 KCNJ2P63252 427 aa14.23□□□□□ -0.13
MRPS28-209ENST00000522987 FOLH1Q04609 750 aa14.23□□□□□ -0.13
MRPS28-209ENST00000522987 C2orf54Q08AI8 447 aa14.23□□□□□ -0.13
MRPS28-209ENST00000522987 PIGGQ5H8A4 983 aa14.23□□□□□ -0.13
MRPS28-209ENST00000522987 C1orf185Q5T7R7 199 aa14.23□□□□□ -0.13
MRPS28-209ENST00000522987 RGS9BPQ6ZS82 235 aa14.23□□□□□ -0.13
MRPS28-209ENST00000522987 LRRC70Q7Z2Q7 622 aa14.23□□□□□ -0.13
MRPS28-209ENST00000522987 ZZZ3Q8IYH5 903 aa14.23□□□□□ -0.13
MRPS28-209ENST00000522987 TEX9Q8N6V9 391 aa14.23□□□□□ -0.13
MRPS28-209ENST00000522987 GOLM1Q8NBJ4 401 aa14.23□□□□□ -0.13
MRPS28-209ENST00000522987 OR7G3Q8NG95 312 aa14.23□□□□□ -0.13
MRPS28-209ENST00000522987 ERVK-6Q9BXR3 956 aa14.23□□□□□ -0.13
MRPS28-209ENST00000522987 ROGDIQ9GZN7 287 aa14.23□□□□□ -0.13
MRPS28-209ENST00000522987 OPTCQ9UBM4 332 aa14.23□□□□□ -0.13
MRPS28-209ENST00000522987 ERVK-19Q9WJR5 959 aa14.23□□□□□ -0.13
MRPS28-209ENST00000522987 TRGV5A0A0B4J1U4 118 aa14.22□□□□□ -0.13
MRPS28-209ENST00000522987 A0A1W2PS29 197 aa14.22□□□□□ -0.13
MRPS28-209ENST00000522987 FAM159BA6NKW6 160 aa14.22□□□□□ -0.13
MRPS28-209ENST00000522987 KDM4EB2RXH2 506 aaPredicted RBP14.22□□□□□ -0.13
MRPS28-209ENST00000522987 AQP7O14520 342 aa14.22□□□□□ -0.13
MRPS28-209ENST00000522987 KRT38O76015 456 aa14.22□□□□□ -0.13
MRPS28-209ENST00000522987 STT3AP46977 705 aa14.22□□□□□ -0.13
MRPS28-209ENST00000522987 IRF9Q00978 393 aa14.22□□□□□ -0.13
MRPS28-209ENST00000522987 CALCOCO2Q13137 446 aa14.22□□□□□ -0.13
MRPS28-209ENST00000522987 ZNF267Q14586 743 aaPredicted RBP14.22□□□□□ -0.13
MRPS28-209ENST00000522987 ZKSCAN8Q15776 578 aaPredicted RBP14.22□□□□□ -0.13
MRPS28-209ENST00000522987 KBTBD12Q3ZCT8 623 aa14.22□□□□□ -0.13
MRPS28-209ENST00000522987 WLSQ5T9L3 541 aa14.22□□□□□ -0.13
MRPS28-209ENST00000522987 KHDRBS2Q5VWX1 349 aaKnown RBP14.22□□□□□ -0.13
MRPS28-209ENST00000522987 CES4AQ5XG92 561 aa14.22□□□□□ -0.13
MRPS28-209ENST00000522987 SLC22A10Q63ZE4 541 aa14.22□□□□□ -0.13
MRPS28-209ENST00000522987 OR4C11Q6IEV9 310 aa14.22□□□□□ -0.13
MRPS28-209ENST00000522987 ADGRD1Q6QNK2 874 aa14.22□□□□□ -0.13
MRPS28-209ENST00000522987 SPNS3Q6ZMD2 512 aa14.22□□□□□ -0.13
MRPS28-209ENST00000522987 C3orf62Q6ZUJ4 267 aa14.22□□□□□ -0.13
MRPS28-209ENST00000522987 CHSY3Q70JA7 882 aa14.22□□□□□ -0.13
MRPS28-209ENST00000522987 SRFBP1Q8NEF9 429 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms