RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 SSX5O60225 188 aa3.93□□□□□ -1.78
HMGB1P1-201ENST00000522557 OR6A2O95222 327 aa3.93□□□□□ -1.78
HMGB1P1-201ENST00000522557 CLDN1O95832 211 aa3.93□□□□□ -1.78
HMGB1P1-201ENST00000522557 SERPINB2P05120 415 aa3.93□□□□□ -1.78
HMGB1P1-201ENST00000522557 PRDX6P30041 224 aa3.93□□□□□ -1.78
HMGB1P1-201ENST00000522557 CHRNB4P30926 498 aa3.93□□□□□ -1.78
HMGB1P1-201ENST00000522557 SLC6A12P48065 614 aa3.93□□□□□ -1.78
HMGB1P1-201ENST00000522557 NLRP11P59045 1033 aaKnown RBP3.93□□□□□ -1.78
HMGB1P1-201ENST00000522557 INAQ16352 499 aa3.93□□□□□ -1.78
HMGB1P1-201ENST00000522557 TMEM30BQ3MIR4 351 aa3.93□□□□□ -1.78
HMGB1P1-201ENST00000522557 CCDC40Q4G0X9 1142 aa3.93□□□□□ -1.78
HMGB1P1-201ENST00000522557 TAF1BQ53T94 588 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P1-201ENST00000522557 C3P1Q6ZMU1 363 aa3.93□□□□□ -1.78
HMGB1P1-201ENST00000522557 CARM1Q86X55 608 aa3.93□□□□□ -1.78
HMGB1P1-201ENST00000522557 PARP8Q8N3A8 854 aa3.93□□□□□ -1.78
HMGB1P1-201ENST00000522557 CCDC197Q8NCU1 140 aa3.93□□□□□ -1.78
HMGB1P1-201ENST00000522557 C11orf45Q8TAV5 145 aa3.93□□□□□ -1.78
HMGB1P1-201ENST00000522557 LIPHQ8WWY8 451 aa3.93□□□□□ -1.78
HMGB1P1-201ENST00000522557 PCED1BQ96HM7 432 aa3.93□□□□□ -1.78
HMGB1P1-201ENST00000522557 NMNAT2Q9BZQ4 307 aa3.93□□□□□ -1.78
HMGB1P1-201ENST00000522557 WDR13Q9H1Z4 485 aa3.93□□□□□ -1.78
HMGB1P1-201ENST00000522557 MTIF3Q9H2K0 278 aaKnown RBP3.93□□□□□ -1.78
HMGB1P1-201ENST00000522557 KLHL8Q9P2G9 620 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P1-201ENST00000522557 ISY1Q9ULR0 285 aaKnown RBP3.93□□□□□ -1.78
HMGB1P1-201ENST00000522557 IGHV3-38A0A0C4DH36 116 aa3.92□□□□□ -1.78
HMGB1P1-201ENST00000522557 RNF222A6NCQ9 220 aa3.92□□□□□ -1.78
HMGB1P1-201ENST00000522557 ZNF724A8MTY0 619 aa3.92□□□□□ -1.78
HMGB1P1-201ENST00000522557 NR5A2O00482 541 aa3.92□□□□□ -1.78
HMGB1P1-201ENST00000522557 CHADO15335 359 aa3.92□□□□□ -1.78
HMGB1P1-201ENST00000522557 TNFSF12O43508 249 aa3.92□□□□□ -1.78
HMGB1P1-201ENST00000522557 HSF2BPO75031 334 aa3.92□□□□□ -1.78
HMGB1P1-201ENST00000522557 SYNGR4O95473 234 aa3.92□□□□□ -1.78
HMGB1P1-201ENST00000522557 APRTP07741 180 aa3.92□□□□□ -1.78
HMGB1P1-201ENST00000522557 FHP07954 510 aa3.92□□□□□ -1.78
HMGB1P1-201ENST00000522557 HMBSP08397 361 aa3.92□□□□□ -1.78
HMGB1P1-201ENST00000522557 TPBGLP0DKB5 382 aa3.92□□□□□ -1.78
HMGB1P1-201ENST00000522557 ARF4P18085 180 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P1-201ENST00000522557 GEMP55040 296 aa3.92□□□□□ -1.78
HMGB1P1-201ENST00000522557 ABCE1P61221 599 aaKnown RBP3.92□□□□□ -1.78
HMGB1P1-201ENST00000522557 HNRNPDQ14103 355 aaKnown RBP3.92□□□□□ -1.78
HMGB1P1-201ENST00000522557 KARSQ15046 597 aaKnown RBP3.92□□□□□ -1.78
HMGB1P1-201ENST00000522557 GPAT3Q53EU6 434 aa3.92□□□□□ -1.78
HMGB1P1-201ENST00000522557 LIPJQ5W064 366 aa3.92□□□□□ -1.78
HMGB1P1-201ENST00000522557 RHBDD2Q6NTF9 364 aa3.92□□□□□ -1.78
HMGB1P1-201ENST00000522557 CDC42EP5Q6NZY7 148 aa3.92□□□□□ -1.78
HMGB1P1-201ENST00000522557 ARHGAP11AQ6P4F7 1023 aa3.92□□□□□ -1.78
HMGB1P1-201ENST00000522557 RFPL4BQ6ZWI9 263 aa3.92□□□□□ -1.78
HMGB1P1-201ENST00000522557 ADCK1Q86TW2 530 aa3.92□□□□□ -1.78
HMGB1P1-201ENST00000522557 AMZ2Q86W34 360 aa3.92□□□□□ -1.78
HMGB1P1-201ENST00000522557 ELMOD1Q8N336 334 aa3.92□□□□□ -1.78
HMGB1P1-201ENST00000522557 WDSUB1Q8N9V3 476 aa3.92□□□□□ -1.78
HMGB1P1-201ENST00000522557 DDHD1Q8NEL9 900 aa3.92□□□□□ -1.78
HMGB1P1-201ENST00000522557 OR9Q2Q8NGE9 314 aa3.92□□□□□ -1.78
HMGB1P1-201ENST00000522557 OR6S1Q8NH40 331 aa3.92□□□□□ -1.78
HMGB1P1-201ENST00000522557 TMEM45BQ96B21 275 aa3.92□□□□□ -1.78
HMGB1P1-201ENST00000522557 RPGRIP1Q96KN7 1286 aa3.92□□□□□ -1.78
HMGB1P1-201ENST00000522557 NSMCE3Q96MG7 304 aa3.92□□□□□ -1.78
HMGB1P1-201ENST00000522557 RBM4Q9BWF3 364 aaKnown RBP3.92□□□□□ -1.78
HMGB1P1-201ENST00000522557 FUNDC2Q9BWH2 189 aa3.92□□□□□ -1.78
HMGB1P1-201ENST00000522557 PARLQ9H300 379 aa3.92□□□□□ -1.78
HMGB1P1-201ENST00000522557 POLE3Q9NRF9 147 aa3.92□□□□□ -1.78
HMGB1P1-201ENST00000522557 PLCXD1Q9NUJ7 323 aa3.92□□□□□ -1.78
HMGB1P1-201ENST00000522557 MED17Q9NVC6 651 aa3.92□□□□□ -1.78
HMGB1P1-201ENST00000522557 BLOC1S6Q9UL45 172 aa3.92□□□□□ -1.78
HMGB1P1-201ENST00000522557 PPP1R3CQ9UQK1 317 aa3.92□□□□□ -1.78
HMGB1P1-201ENST00000522557 SNED1Q8TER0 1413 aa3.92□□□□□ -1.78
HMGB1P1-201ENST00000522557 HHLA1C9JL84 531 aa3.91□□□□□ -1.78
HMGB1P1-201ENST00000522557 EEF2KO00418 725 aaKnown RBP3.91□□□□□ -1.78
HMGB1P1-201ENST00000522557 NACADO15069 1562 aa3.91□□□□□ -1.78
HMGB1P1-201ENST00000522557 TSPAN2O60636 221 aa3.91□□□□□ -1.78
HMGB1P1-201ENST00000522557 SMPD2O60906 423 aa3.91□□□□□ -1.78
HMGB1P1-201ENST00000522557 CAVIN2O95810 425 aa3.91□□□□□ -1.78
HMGB1P1-201ENST00000522557 HPRP00739 348 aa3.91□□□□□ -1.78
HMGB1P1-201ENST00000522557 IGHEP01854 428 aa3.91□□□□□ -1.78
HMGB1P1-201ENST00000522557 KRT6BP04259 564 aa3.91□□□□□ -1.78
HMGB1P1-201ENST00000522557 PRKAR1AP10644 381 aa3.91□□□□□ -1.78
HMGB1P1-201ENST00000522557 GHRP10912 638 aa3.91□□□□□ -1.78
HMGB1P1-201ENST00000522557 GIFP27352 417 aa3.91□□□□□ -1.78
HMGB1P1-201ENST00000522557 STIP1P31948 543 aaKnown RBP3.91□□□□□ -1.78
HMGB1P1-201ENST00000522557 HPDP32754 393 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P1-201ENST00000522557 MDH1P40925 334 aaKnown RBP3.91□□□□□ -1.78
HMGB1P1-201ENST00000522557 KRT6CP48668 564 aa3.91□□□□□ -1.78
HMGB1P1-201ENST00000522557 CRYBA2P53672 197 aa3.91□□□□□ -1.78
HMGB1P1-201ENST00000522557 RPL27P61353 136 aaKnown RBP3.91□□□□□ -1.78
HMGB1P1-201ENST00000522557 CYCSP99999 105 aaKnown RBP3.91□□□□□ -1.78
HMGB1P1-201ENST00000522557 NAAAQ02083 359 aa3.91□□□□□ -1.78
HMGB1P1-201ENST00000522557 SNX1Q13596 522 aa3.91□□□□□ -1.78
HMGB1P1-201ENST00000522557 TAF7Q15545 349 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P1-201ENST00000522557 LRIT3Q3SXY7 679 aa3.91□□□□□ -1.78
HMGB1P1-201ENST00000522557 ACSF3Q4G176 576 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P1-201ENST00000522557 C1orf189Q5VU69 101 aa3.91□□□□□ -1.78
HMGB1P1-201ENST00000522557 BNIPLQ7Z465 357 aa3.91□□□□□ -1.78
HMGB1P1-201ENST00000522557 GPR142Q7Z601 462 aa3.91□□□□□ -1.78
HMGB1P1-201ENST00000522557 GVQW1Q8N7I0 195 aa3.91□□□□□ -1.78
HMGB1P1-201ENST00000522557 PRSS33Q8NF86 280 aa3.91□□□□□ -1.78
HMGB1P1-201ENST00000522557 OR10G7Q8NGN6 311 aa3.91□□□□□ -1.78
HMGB1P1-201ENST00000522557 OR6F1Q8NGZ6 308 aa3.91□□□□□ -1.78
HMGB1P1-201ENST00000522557 MRGPRDQ8TDS7 321 aa3.91□□□□□ -1.78
HMGB1P1-201ENST00000522557 U2AF1L4Q8WU68 220 aaKnown RBP3.91□□□□□ -1.78
HMGB1P1-201ENST00000522557 CCDC51Q96ER9 411 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms