RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 FGF3P11487 239 aaPredicted RBP15.51■□□□□ 0.07
USP42-207ENST00000521713 UQCRC2P22695 453 aa15.51■□□□□ 0.07
USP42-207ENST00000521713 PDX1P52945 283 aa15.51■□□□□ 0.07
USP42-207ENST00000521713 PPP3R1P63098 170 aa15.51■□□□□ 0.07
USP42-207ENST00000521713 LRP8Q14114 963 aa15.51■□□□□ 0.07
USP42-207ENST00000521713 REEP3Q6NUK4 255 aa15.51■□□□□ 0.07
USP42-207ENST00000521713 ZFAND4Q86XD8 727 aa15.51■□□□□ 0.07
USP42-207ENST00000521713 FATE1Q969F0 183 aa15.51■□□□□ 0.07
USP42-207ENST00000521713 IFT46Q9NQC8 304 aa15.51■□□□□ 0.07
USP42-207ENST00000521713 HCN2Q9UL51 889 aa15.51■□□□□ 0.07
USP42-207ENST00000521713 DNMT3AQ9Y6K1 912 aaPredicted RBP15.51■□□□□ 0.07
USP42-207ENST00000521713 CPSF4LA6NMK7 179 aaKnown RBP15.51■□□□□ 0.07
USP42-207ENST00000521713 HIDE1A8MVS5 230 aa15.51■□□□□ 0.07
USP42-207ENST00000521713 KIAA0355O15063 1070 aa15.51■□□□□ 0.07
USP42-207ENST00000521713 DOC2AQ14183 400 aa15.51■□□□□ 0.07
USP42-207ENST00000521713 GANABQ14697 944 aaKnown RBP15.51■□□□□ 0.07
USP42-207ENST00000521713 MEP1AQ16819 746 aa15.51■□□□□ 0.07
USP42-207ENST00000521713 CATSPEREQ5SY80 951 aa15.51■□□□□ 0.07
USP42-207ENST00000521713 PLEKHG7Q6ZR37 379 aa15.51■□□□□ 0.07
USP42-207ENST00000521713 NFKBIDQ8NI38 313 aa15.51■□□□□ 0.07
USP42-207ENST00000521713 GRHL3Q8TE85 626 aa15.51■□□□□ 0.07
USP42-207ENST00000521713 ZDHHC1Q8WTX9 485 aa15.51■□□□□ 0.07
USP42-207ENST00000521713 IL17FQ96PD4 163 aa15.51■□□□□ 0.07
USP42-207ENST00000521713 ZBP1Q9H171 429 aa15.51■□□□□ 0.07
USP42-207ENST00000521713 ZNF395Q9H8N7 513 aaPredicted RBP15.51■□□□□ 0.07
USP42-207ENST00000521713 TMEM184CQ9NVA4 438 aa15.51■□□□□ 0.07
USP42-207ENST00000521713 DNMT3BQ9UBC3 853 aaKnown RBP15.51■□□□□ 0.07
USP42-207ENST00000521713 ENTPD2Q9Y5L3 495 aa15.51■□□□□ 0.07
USP42-207ENST00000521713 HSPE1-MOB4S4R3N1 261 aa15.51■□□□□ 0.07
USP42-207ENST00000521713 VSTM5A8MXK1 200 aa15.51■□□□□ 0.07
USP42-207ENST00000521713 GPR89AB7ZAQ6 455 aa15.51■□□□□ 0.07
USP42-207ENST00000521713 MUSKO15146 869 aa15.51■□□□□ 0.07
USP42-207ENST00000521713 HBQ1P09105 142 aa15.51■□□□□ 0.07
USP42-207ENST00000521713 GPR89BP0CG08 455 aa15.51■□□□□ 0.07
USP42-207ENST00000521713 CD97P48960 835 aa15.51■□□□□ 0.07
USP42-207ENST00000521713 DEFB134Q4QY38 66 aa15.51■□□□□ 0.07
USP42-207ENST00000521713 CLCC1Q96S66 551 aa15.51■□□□□ 0.07
USP42-207ENST00000521713 LGR4Q9BXB1 951 aa15.51■□□□□ 0.07
USP42-207ENST00000521713 DEFB126Q9BYW3 111 aa15.51■□□□□ 0.07
USP42-207ENST00000521713 FBXO9Q9UK97 447 aaPredicted RBP15.51■□□□□ 0.07
USP42-207ENST00000521713 ZNF860A6NHJ4 632 aa15.51■□□□□ 0.07
USP42-207ENST00000521713 ANXA3P12429 323 aa15.51■□□□□ 0.07
USP42-207ENST00000521713 CD68P34810 354 aaPredicted RBP15.51■□□□□ 0.07
USP42-207ENST00000521713 ERVFC1P60507 584 aa15.51■□□□□ 0.07
USP42-207ENST00000521713 POU6F2P78424 691 aaPredicted RBP15.51■□□□□ 0.07
USP42-207ENST00000521713 ANKDD1AQ495B1 522 aa15.51■□□□□ 0.07
USP42-207ENST00000521713 C4orf46Q504U0 113 aa15.51■□□□□ 0.07
USP42-207ENST00000521713 C6orf141Q5SZD1 244 aa15.51■□□□□ 0.07
USP42-207ENST00000521713 HACD2Q6Y1H2 254 aa15.51■□□□□ 0.07
USP42-207ENST00000521713 CYP4V2Q6ZWL3 525 aaPredicted RBP15.51■□□□□ 0.07
USP42-207ENST00000521713 MFSD6LQ8IWD5 586 aa15.51■□□□□ 0.07
USP42-207ENST00000521713 OR10H4Q8NGA5 316 aa15.51■□□□□ 0.07
USP42-207ENST00000521713 THAP6Q8TBB0 222 aa15.51■□□□□ 0.07
USP42-207ENST00000521713 PNPLA2Q96AD5 504 aa15.51■□□□□ 0.07
USP42-207ENST00000521713 FAM129BQ96TA1 746 aa15.51■□□□□ 0.07
USP42-207ENST00000521713 IL26Q9NPH9 171 aa15.51■□□□□ 0.07
USP42-207ENST00000521713 SMAD6O43541 496 aaKnown RBP15.5■□□□□ 0.07
USP42-207ENST00000521713 OPN1SWP03999 348 aa15.5■□□□□ 0.07
USP42-207ENST00000521713 CD9P21926 228 aa15.5■□□□□ 0.07
USP42-207ENST00000521713 RBMS1P29558 406 aaKnown RBP15.5■□□□□ 0.07
USP42-207ENST00000521713 ECHS1P30084 290 aa15.5■□□□□ 0.07
USP42-207ENST00000521713 PPP5CP53041 499 aa15.5■□□□□ 0.07
USP42-207ENST00000521713 NFE2L1Q14494 772 aa15.5■□□□□ 0.07
USP42-207ENST00000521713 FAM76BQ5HYJ3 339 aa15.5■□□□□ 0.07
USP42-207ENST00000521713 ASB18Q6ZVZ8 466 aa15.5■□□□□ 0.07
USP42-207ENST00000521713 RHBDF1Q96CC6 855 aa15.5■□□□□ 0.07
USP42-207ENST00000521713 ZNF778Q96MU6 729 aa15.5■□□□□ 0.07
USP42-207ENST00000521713 ZNF285Q96NJ3 590 aa15.5■□□□□ 0.07
USP42-207ENST00000521713 FUZQ9BT04 418 aa15.5■□□□□ 0.07
USP42-207ENST00000521713 APOOQ9BUR5 198 aa15.5■□□□□ 0.07
USP42-207ENST00000521713 B3GAT2Q9NPZ5 323 aa15.5■□□□□ 0.07
USP42-207ENST00000521713 HCSTQ9UBK5 93 aa15.5■□□□□ 0.07
USP42-207ENST00000521713 ADAMTS6Q9UKP5 1117 aa15.5■□□□□ 0.07
USP42-207ENST00000521713 LINC01553A4QN01 128 aa15.5■□□□□ 0.07
USP42-207ENST00000521713 DRD2P14416 443 aa15.5■□□□□ 0.07
USP42-207ENST00000521713 ZNF41P51814 821 aaPredicted RBP15.5■□□□□ 0.07
USP42-207ENST00000521713 SIX1Q15475 284 aaPredicted RBP15.5■□□□□ 0.07
USP42-207ENST00000521713 KLHL26Q53HC5 615 aa15.5■□□□□ 0.07
USP42-207ENST00000521713 OR52E8Q6IFG1 317 aa15.5■□□□□ 0.07
USP42-207ENST00000521713 RAB12Q6IQ22 244 aa15.5■□□□□ 0.07
USP42-207ENST00000521713 USP53Q70EK8 1073 aa15.5■□□□□ 0.07
USP42-207ENST00000521713 RPS27LQ71UM5 84 aaKnown RBP15.5■□□□□ 0.07
USP42-207ENST00000521713 TREML1Q86YW5 311 aa15.5■□□□□ 0.07
USP42-207ENST00000521713 OR6K6Q8NGW6 343 aa15.5■□□□□ 0.07
USP42-207ENST00000521713 C1orf216Q8TAB5 229 aa15.5■□□□□ 0.07
USP42-207ENST00000521713 STOML3Q8TAV4 291 aa15.5■□□□□ 0.07
USP42-207ENST00000521713 G6PC3Q9BUM1 346 aa15.5■□□□□ 0.07
USP42-207ENST00000521713 SLA2Q9H6Q3 261 aa15.5■□□□□ 0.07
USP42-207ENST00000521713 ZNF334Q9HCZ1 680 aaPredicted RBP15.5■□□□□ 0.07
USP42-207ENST00000521713 EPHA6Q9UF33 1036 aa15.5■□□□□ 0.07
USP42-207ENST00000521713 COL18A1P39060 1754 aa15.5■□□□□ 0.07
USP42-207ENST00000521713 NPIPB15A6NHN6 443 aaPredicted RBP15.5■□□□□ 0.07
USP42-207ENST00000521713 RP2O75695 350 aa15.5■□□□□ 0.07
USP42-207ENST00000521713 SCGNO76038 276 aa15.5■□□□□ 0.07
USP42-207ENST00000521713 CDRT1O95170 752 aa15.5■□□□□ 0.07
USP42-207ENST00000521713 EIF2S3P41091 472 aaKnown RBP15.5■□□□□ 0.07
USP42-207ENST00000521713 SMSP52788 366 aa15.5■□□□□ 0.07
USP42-207ENST00000521713 CDKN2DP55273 166 aa15.5■□□□□ 0.07
USP42-207ENST00000521713 CDKL4Q5MAI5 379 aa15.5■□□□□ 0.07
USP42-207ENST00000521713 HAGHLQ6PII5 290 aaPredicted RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms