RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 COPS7AQ9UBW8 275 aa2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 CLIP2Q9UDT6 1046 aa2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 ICAM5Q9UMF0 924 aa2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 AURKCQ9UQB9 309 aa2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 LRP12Q9Y561 859 aa2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 MAP3K1Q13233 1512 aa2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 KIF7Q2M1P5 1343 aa2.93□□□□□ -1.94
HMGN1P28-201ENST00000521340 KDRP35968 1356 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 A0A087WYN8 130 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 YJEFN3A6XGL0 299 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 SLC1A7O00341 560 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 NDC80O14777 642 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 SSX5O60225 188 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 HSF2BPO75031 334 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 GMNNO75496 209 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 AKR7A3O95154 331 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 GOT2P00505 430 aaKnown RBP2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 CALCAP01258 141 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 APRTP07741 180 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 CFC1BP0CG36 223 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 CFC1P0CG37 223 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 TPBGLP0DKB5 382 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 NCF1P14598 390 aaPredicted RBP2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 ZNF26P17031 533 aaPredicted RBP2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 ANOS1P23352 680 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 CALRP27797 417 aaKnown RBP2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 STIP1P31948 543 aaKnown RBP2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 TRIM23P36406 574 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 OPRL1P41146 370 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 MAGEA4P43358 317 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 PRELPP51888 382 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 ZKSCAN8Q15776 578 aaPredicted RBP2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 ADPRMQ3LIE5 342 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 GPAT3Q53EU6 434 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 CMPK2Q5EBM0 449 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 LIPKQ5VXJ0 399 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 RUSC1-AS1Q66K80 236 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 HIST2H2AA3Q6FI13 130 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 RHBDD2Q6NTF9 364 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 IRGCQ6NXR0 463 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 BHLHB9Q6PI77 547 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 RFPL4BQ6ZWI9 263 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 HOGA1Q86XE5 327 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 GRAMD2AQ8IUY3 354 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 DCUN1D3Q8IWE4 304 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 KLHDC8BQ8IXV7 354 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 LMNTD2Q8IXW0 634 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 PARP8Q8N3A8 854 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 LRRC17Q8N6Y2 441 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 FAM133AQ8N9E0 248 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 TMEM178AQ8NBL3 297 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 GMCL1P1Q8NEA9 526 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 ANKRD20A12PQ8NF67 263 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 ZNF397Q8NF99 534 aaPredicted RBP2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 OR4D10Q8NGI6 311 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 OR2T34Q8NGX1 318 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 C11orf45Q8TAV5 145 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 GANCQ8TET4 914 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 CHPT1Q8WUD6 406 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 MCHR2Q969V1 340 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 SYAP1Q96A49 352 aaPredicted RBP2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 RBM18Q96H35 190 aaKnown RBP2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 UBAC1Q9BSL1 405 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 DCTN5Q9BTE1 182 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 FUNDC2Q9BWH2 189 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 MRPL13Q9BYD1 178 aaKnown RBP2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 HOXD1Q9GZZ0 328 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 RAB17Q9H0T7 212 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 IL1RAPQ9NPH3 570 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 CGNQ9P2M7 1197 aaKnown RBP2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 ANKMY1Q9P2S6 941 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 TEKT2Q9UIF3 430 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 ZNF580Q9UK33 172 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 TCF19Q9Y242 345 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 WDR37Q9Y2I8 494 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 KLF2Q9Y5W3 355 aaPredicted RBP2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 ABCA5Q8WWZ7 1642 aa2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 RRBP1Q9P2E9 1410 aaKnown RBP2.92□□□□□ -1.94
HMGN1P28-201ENST00000521340 SAMD9Q5K651 1589 aa2.91□□□□□ -1.94
HMGN1P28-201ENST00000521340 DNMBPQ6XZF7 1577 aa2.91□□□□□ -1.94
HMGN1P28-201ENST00000521340 CFTRP13569 1480 aa2.91□□□□□ -1.94
HMGN1P28-201ENST00000521340 NCAPD3P42695 1498 aa2.91□□□□□ -1.94
HMGN1P28-201ENST00000521340 HECW1Q76N89 1606 aa2.91□□□□□ -1.94
HMGN1P28-201ENST00000521340 TRBV5-4A0A0C4DH59 114 aa2.91□□□□□ -1.94
HMGN1P28-201ENST00000521340 A0A1B0GUL7 405 aa2.91□□□□□ -1.94
HMGN1P28-201ENST00000521340 MEX3AA1L020 520 aaKnown RBP2.91□□□□□ -1.94
HMGN1P28-201ENST00000521340 EME2A4GXA9 379 aaPredicted RBP2.91□□□□□ -1.94
HMGN1P28-201ENST00000521340 ZNF724A8MTY0 619 aa2.91□□□□□ -1.94
HMGN1P28-201ENST00000521340 MPTX1A8MV57 137 aa2.91□□□□□ -1.94
HMGN1P28-201ENST00000521340 SLCO1B7G3V0H7 640 aa2.91□□□□□ -1.94
HMGN1P28-201ENST00000521340 ANGPT2O15123 496 aa2.91□□□□□ -1.94
HMGN1P28-201ENST00000521340 SURF4O15260 269 aa2.91□□□□□ -1.94
HMGN1P28-201ENST00000521340 GRID2O43424 1007 aa2.91□□□□□ -1.94
HMGN1P28-201ENST00000521340 TNFSF12O43508 249 aa2.91□□□□□ -1.94
HMGN1P28-201ENST00000521340 KRT86O43790 486 aa2.91□□□□□ -1.94
HMGN1P28-201ENST00000521340 PEX11AO75192 247 aa2.91□□□□□ -1.94
HMGN1P28-201ENST00000521340 CSO75390 466 aaKnown RBP2.91□□□□□ -1.94
HMGN1P28-201ENST00000521340 TOXO94900 526 aa2.91□□□□□ -1.94
HMGN1P28-201ENST00000521340 AK1P00568 194 aa2.91□□□□□ -1.94
HMGN1P28-201ENST00000521340 KRT6BP04259 564 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms