RNA–Protein interactions for RNA: ENST00000521233.1

HDAC2-211, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 733 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-211ENST00000521233 KCNAB2Q13303 367 aa11.72□□□□□ -0.53
HDAC2-211ENST00000521233 PDCD2Q16342 344 aaPredicted RBP11.72□□□□□ -0.53
HDAC2-211ENST00000521233 SMU1Q2TAY7 513 aa11.72□□□□□ -0.53
HDAC2-211ENST00000521233 FAM219BQ5XKK7 198 aa11.72□□□□□ -0.53
HDAC2-211ENST00000521233 C18orf63Q68DL7 685 aa11.72□□□□□ -0.53
HDAC2-211ENST00000521233 PLAG1Q6DJT9 500 aa11.72□□□□□ -0.53
HDAC2-211ENST00000521233 NOXRED1Q6NXP6 359 aa11.72□□□□□ -0.53
HDAC2-211ENST00000521233 JMJD6Q6NYC1 403 aaPredicted RBP11.72□□□□□ -0.53
HDAC2-211ENST00000521233 PARP9Q8IXQ6 854 aa11.72□□□□□ -0.53
HDAC2-211ENST00000521233 LRRC34Q8IZ02 419 aa11.72□□□□□ -0.53
HDAC2-211ENST00000521233 SAMD14Q8IZD0 417 aaPredicted RBP11.72□□□□□ -0.53
HDAC2-211ENST00000521233 SHISA5Q8N114 240 aa11.72□□□□□ -0.53
HDAC2-211ENST00000521233 TMEM132CQ8N3T6 1108 aa11.72□□□□□ -0.53
HDAC2-211ENST00000521233 LSM14AQ8ND56 463 aaKnown RBP11.72□□□□□ -0.53
HDAC2-211ENST00000521233 OR14A16Q8NHC5 309 aa11.72□□□□□ -0.53
HDAC2-211ENST00000521233 ZNF75CPQ92670 426 aaPredicted RBP11.72□□□□□ -0.53
HDAC2-211ENST00000521233 C7orf26Q96N11 449 aa11.72□□□□□ -0.53
HDAC2-211ENST00000521233 LHPPQ9H008 270 aa11.72□□□□□ -0.53
HDAC2-211ENST00000521233 NECTIN3Q9NQS3 549 aa11.72□□□□□ -0.53
HDAC2-211ENST00000521233 EHD3Q9NZN3 535 aa11.72□□□□□ -0.53
HDAC2-211ENST00000521233 VTI1BQ9UEU0 232 aa11.72□□□□□ -0.53
HDAC2-211ENST00000521233 PSME2Q9UL46 239 aa11.72□□□□□ -0.53
HDAC2-211ENST00000521233 PCDHGB7Q9Y5F8 929 aa11.72□□□□□ -0.53
HDAC2-211ENST00000521233 PCDHGA9Q9Y5G4 932 aaKnown RBP11.72□□□□□ -0.53
HDAC2-211ENST00000521233 PCDHA9Q9Y5H5 950 aa11.72□□□□□ -0.53
HDAC2-211ENST00000521233 LAMA5O15230 3695 aa11.72□□□□□ -0.53
HDAC2-211ENST00000521233 SPTA1P02549 2419 aa11.72□□□□□ -0.53
HDAC2-211ENST00000521233 MGAQ8IWI9 3026 aa11.72□□□□□ -0.53
HDAC2-211ENST00000521233 IGSF10Q6WRI0 2623 aa11.71□□□□□ -0.53
HDAC2-211ENST00000521233 OR2W5A6NFC9 320 aa11.71□□□□□ -0.53
HDAC2-211ENST00000521233 TRPC5OSA6NMA1 111 aa11.71□□□□□ -0.53
HDAC2-211ENST00000521233 HDAC3O15379 428 aa11.71□□□□□ -0.53
HDAC2-211ENST00000521233 FGF17O60258 216 aa11.71□□□□□ -0.53
HDAC2-211ENST00000521233 LDB3O75112 727 aa11.71□□□□□ -0.53
HDAC2-211ENST00000521233 CEACAM4O75871 244 aa11.71□□□□□ -0.53
HDAC2-211ENST00000521233 GPR75O95800 540 aa11.71□□□□□ -0.53
HDAC2-211ENST00000521233 IFNA16P05015 189 aa11.71□□□□□ -0.53
HDAC2-211ENST00000521233 IL3P08700 152 aa11.71□□□□□ -0.53
HDAC2-211ENST00000521233 ALOX15P16050 662 aaPredicted RBP11.71□□□□□ -0.53
HDAC2-211ENST00000521233 DDX5P17844 614 aaKnown RBP11.71□□□□□ -0.53
HDAC2-211ENST00000521233 PIK3R1P27986 724 aa11.71□□□□□ -0.53
HDAC2-211ENST00000521233 ASMTP46597 345 aa11.71□□□□□ -0.53
HDAC2-211ENST00000521233 TAS2R50P59544 299 aa11.71□□□□□ -0.53
HDAC2-211ENST00000521233 FOLH1Q04609 750 aa11.71□□□□□ -0.53
HDAC2-211ENST00000521233 MYBPC3Q14896 1274 aa11.71□□□□□ -0.53
HDAC2-211ENST00000521233 BTBD16Q32M84 506 aa11.71□□□□□ -0.53
HDAC2-211ENST00000521233 GALNTL6Q49A17 601 aa11.71□□□□□ -0.53
HDAC2-211ENST00000521233 C6orf163Q5TEZ5 329 aa11.71□□□□□ -0.53
HDAC2-211ENST00000521233 VWA5B1Q5TIE3 1220 aa11.71□□□□□ -0.53
HDAC2-211ENST00000521233 SLC48A1Q6P1K1 146 aa11.71□□□□□ -0.53
HDAC2-211ENST00000521233 ATG14Q6ZNE5 492 aa11.71□□□□□ -0.53
HDAC2-211ENST00000521233 Q6ZSR9 355 aa11.71□□□□□ -0.53
HDAC2-211ENST00000521233 HPS6Q86YV9 775 aa11.71□□□□□ -0.53
HDAC2-211ENST00000521233 CRLF3Q8IUI8 442 aa11.71□□□□□ -0.53
HDAC2-211ENST00000521233 ST13P4Q8IZP2 240 aaPredicted RBP11.71□□□□□ -0.53
HDAC2-211ENST00000521233 OR2T11Q8NH01 316 aa11.71□□□□□ -0.53
HDAC2-211ENST00000521233 CDC26Q8NHZ8 85 aa11.71□□□□□ -0.53
HDAC2-211ENST00000521233 M1APQ8TC57 530 aa11.71□□□□□ -0.53
HDAC2-211ENST00000521233 C16orf78Q8WTQ4 265 aa11.71□□□□□ -0.53
HDAC2-211ENST00000521233 DAZLQ92904 295 aaKnown RBP11.71□□□□□ -0.53
HDAC2-211ENST00000521233 TM4SF18Q96CE8 201 aa11.71□□□□□ -0.53
HDAC2-211ENST00000521233 TUBGCP3Q96CW5 907 aa11.71□□□□□ -0.53
HDAC2-211ENST00000521233 ART5Q96L15 291 aa11.71□□□□□ -0.53
HDAC2-211ENST00000521233 FCRL1Q96LA6 429 aa11.71□□□□□ -0.53
HDAC2-211ENST00000521233 IMMP1LQ96LU5 166 aa11.71□□□□□ -0.53
HDAC2-211ENST00000521233 DGAT2Q96PD7 388 aa11.71□□□□□ -0.53
HDAC2-211ENST00000521233 WDR77Q9BQA1 342 aaPredicted RBP11.71□□□□□ -0.53
HDAC2-211ENST00000521233 EBPLQ9BY08 206 aa11.71□□□□□ -0.53
HDAC2-211ENST00000521233 ALOXE3Q9BYJ1 711 aa11.71□□□□□ -0.53
HDAC2-211ENST00000521233 TRIM55Q9BYV6 548 aa11.71□□□□□ -0.53
HDAC2-211ENST00000521233 C20orf27Q9GZN8 174 aa11.71□□□□□ -0.53
HDAC2-211ENST00000521233 ZNF395Q9H8N7 513 aaPredicted RBP11.71□□□□□ -0.53
HDAC2-211ENST00000521233 PNO1Q9NRX1 252 aaKnown RBP11.71□□□□□ -0.53
HDAC2-211ENST00000521233 GIMAP4Q9NUV9 329 aa11.71□□□□□ -0.53
HDAC2-211ENST00000521233 GPR83Q9NYM4 423 aa11.71□□□□□ -0.53
HDAC2-211ENST00000521233 DLGAP4Q9Y2H0 992 aa11.71□□□□□ -0.53
HDAC2-211ENST00000521233 POLR3HQ9Y535 204 aaPredicted RBP11.71□□□□□ -0.53
HDAC2-211ENST00000521233 CLCA3PQ9Y6N3 262 aa11.71□□□□□ -0.53
HDAC2-211ENST00000521233 TLN1Q9Y490 2541 aaKnown RBP11.71□□□□□ -0.53
HDAC2-211ENST00000521233 CHD6Q8TD26 2715 aa11.71□□□□□ -0.54
HDAC2-211ENST00000521233 PCSK5Q92824 1860 aa11.7□□□□□ -0.54
HDAC2-211ENST00000521233 IGHV3-20A0A0C4DH32 117 aa11.7□□□□□ -0.54
HDAC2-211ENST00000521233 GLOD5A6NK44 160 aa11.7□□□□□ -0.54
HDAC2-211ENST00000521233 TGFBR3LH3BV60 316 aa11.7□□□□□ -0.54
HDAC2-211ENST00000521233 ATXN7O15265 892 aaPredicted RBP11.7□□□□□ -0.54
HDAC2-211ENST00000521233 OR10H2O60403 315 aa11.7□□□□□ -0.54
HDAC2-211ENST00000521233 PRKRAO75569 313 aaKnown RBP11.7□□□□□ -0.54
HDAC2-211ENST00000521233 DNAJB5O75953 348 aa11.7□□□□□ -0.54
HDAC2-211ENST00000521233 PRR35P0CG20 571 aa11.7□□□□□ -0.54
HDAC2-211ENST00000521233 PCSK2P16519 638 aa11.7□□□□□ -0.54
HDAC2-211ENST00000521233 GALNSP34059 522 aa11.7□□□□□ -0.54
HDAC2-211ENST00000521233 STT3AP46977 705 aa11.7□□□□□ -0.54
HDAC2-211ENST00000521233 ALDH9A1P49189 494 aa11.7□□□□□ -0.54
HDAC2-211ENST00000521233 CCL11P51671 97 aa11.7□□□□□ -0.54
HDAC2-211ENST00000521233 PGDP52209 483 aa11.7□□□□□ -0.54
HDAC2-211ENST00000521233 SLC26A5P58743 744 aa11.7□□□□□ -0.54
HDAC2-211ENST00000521233 KIAA0040Q15053 153 aa11.7□□□□□ -0.54
HDAC2-211ENST00000521233 LINC00303Q3SY05 128 aa11.7□□□□□ -0.54
HDAC2-211ENST00000521233 RGS9BPQ6ZS82 235 aa11.7□□□□□ -0.54
HDAC2-211ENST00000521233 FAM9CQ8IZT9 166 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms