RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 B4GALT2O60909 372 aa14.4□□□□□ -0.1
LSM1-203ENST00000520755 HEXBP07686 556 aa14.4□□□□□ -0.1
LSM1-203ENST00000520755 UMODP07911 640 aa14.4□□□□□ -0.1
LSM1-203ENST00000520755 FHP07954 510 aa14.4□□□□□ -0.1
LSM1-203ENST00000520755 FURINP09958 794 aa14.4□□□□□ -0.1
LSM1-203ENST00000520755 NR2F6P10588 404 aa14.4□□□□□ -0.1
LSM1-203ENST00000520755 NCF2P19878 526 aaPredicted RBP14.4□□□□□ -0.1
LSM1-203ENST00000520755 JAK1P23458 1154 aa14.4□□□□□ -0.1
LSM1-203ENST00000520755 GSTM5P46439 218 aa14.4□□□□□ -0.1
LSM1-203ENST00000520755 CLDN8P56748 225 aa14.4□□□□□ -0.1
LSM1-203ENST00000520755 VAC14Q08AM6 782 aa14.4□□□□□ -0.1
LSM1-203ENST00000520755 PDE7AQ13946 482 aa14.4□□□□□ -0.1
LSM1-203ENST00000520755 UGT8Q16880 541 aa14.4□□□□□ -0.1
LSM1-203ENST00000520755 ZNF385BQ569K4 471 aa14.4□□□□□ -0.1
LSM1-203ENST00000520755 FAAH2Q6GMR7 532 aa14.4□□□□□ -0.1
LSM1-203ENST00000520755 PAOXQ6QHF9 649 aa14.4□□□□□ -0.1
LSM1-203ENST00000520755 C19orf48Q6RUI8 117 aa14.4□□□□□ -0.1
LSM1-203ENST00000520755 IKBIPQ70UQ0 350 aa14.4□□□□□ -0.1
LSM1-203ENST00000520755 PARP9Q8IXQ6 854 aa14.4□□□□□ -0.1
LSM1-203ENST00000520755 CPSF7Q8N684 471 aaKnown RBP14.4□□□□□ -0.1
LSM1-203ENST00000520755 CCDC197Q8NCU1 140 aa14.4□□□□□ -0.1
LSM1-203ENST00000520755 CRELD1Q96HD1 420 aa14.4□□□□□ -0.1
LSM1-203ENST00000520755 OR1F2PQ96R84 312 aa14.4□□□□□ -0.1
LSM1-203ENST00000520755 LANCL2Q9NS86 450 aa14.4□□□□□ -0.1
LSM1-203ENST00000520755 ARMCX1Q9P291 453 aa14.4□□□□□ -0.1
LSM1-203ENST00000520755 C5AR2Q9P296 337 aa14.4□□□□□ -0.1
LSM1-203ENST00000520755 C3orf18Q9UK00 162 aa14.4□□□□□ -0.1
LSM1-203ENST00000520755 MKL2Q9ULH7 1088 aa14.4□□□□□ -0.1
LSM1-203ENST00000520755 TRIM33Q9UPN9 1127 aa14.4□□□□□ -0.1
LSM1-203ENST00000520755 PCDHA9Q9Y5H5 950 aa14.4□□□□□ -0.1
LSM1-203ENST00000520755 CLDN16Q9Y5I7 305 aa14.4□□□□□ -0.1
LSM1-203ENST00000520755 NUP214P35658 2090 aaPredicted RBP14.4□□□□□ -0.1
LSM1-203ENST00000520755 TPRP12270 2363 aaKnown RBP14.39□□□□□ -0.11
LSM1-203ENST00000520755 A0A1W2PS29 197 aa14.39□□□□□ -0.11
LSM1-203ENST00000520755 OR2W5A6NFC9 320 aa14.39□□□□□ -0.11
LSM1-203ENST00000520755 GLOD5A6NK44 160 aa14.39□□□□□ -0.11
LSM1-203ENST00000520755 IDSB3KWA1 339 aa14.39□□□□□ -0.11
LSM1-203ENST00000520755 TGFBR3LH3BV60 316 aa14.39□□□□□ -0.11
LSM1-203ENST00000520755 K7ENP7 123 aa14.39□□□□□ -0.11
LSM1-203ENST00000520755 PGRMC2O15173 223 aa14.39□□□□□ -0.11
LSM1-203ENST00000520755 DDCP20711 480 aa14.39□□□□□ -0.11
LSM1-203ENST00000520755 IL10P22301 178 aa14.39□□□□□ -0.11
LSM1-203ENST00000520755 CPN2P22792 545 aa14.39□□□□□ -0.11
LSM1-203ENST00000520755 ASMTP46597 345 aa14.39□□□□□ -0.11
LSM1-203ENST00000520755 EMP2P54851 167 aa14.39□□□□□ -0.11
LSM1-203ENST00000520755 C2orf80Q0P641 193 aa14.39□□□□□ -0.11
LSM1-203ENST00000520755 CDC20Q12834 499 aa14.39□□□□□ -0.11
LSM1-203ENST00000520755 SSPNQ14714 243 aa14.39□□□□□ -0.11
LSM1-203ENST00000520755 MPEG1Q2M385 716 aa14.39□□□□□ -0.11
LSM1-203ENST00000520755 ANKRD26P1Q6NSI1 321 aa14.39□□□□□ -0.11
LSM1-203ENST00000520755 INO80CQ6PI98 192 aaPredicted RBP14.39□□□□□ -0.11
LSM1-203ENST00000520755 MED25Q71SY5 747 aa14.39□□□□□ -0.11
LSM1-203ENST00000520755 MTDHQ86UE4 582 aaKnown RBP14.39□□□□□ -0.11
LSM1-203ENST00000520755 RAB43Q86YS6 212 aa14.39□□□□□ -0.11
LSM1-203ENST00000520755 FUNDC1Q8IVP5 155 aa14.39□□□□□ -0.11
LSM1-203ENST00000520755 MIER2Q8N344 545 aa14.39□□□□□ -0.11
LSM1-203ENST00000520755 TMEM132CQ8N3T6 1108 aa14.39□□□□□ -0.11
LSM1-203ENST00000520755 CLMPQ9H6B4 373 aa14.39□□□□□ -0.11
LSM1-203ENST00000520755 SEMA3GQ9NS98 782 aa14.39□□□□□ -0.11
LSM1-203ENST00000520755 ZIM2Q9NZV7 527 aa14.39□□□□□ -0.11
LSM1-203ENST00000520755 CES1P1Q9UKY3 287 aa14.39□□□□□ -0.11
LSM1-203ENST00000520755 SPACA6W5XKT8 324 aa14.39□□□□□ -0.11
LSM1-203ENST00000520755 LAMA5O15230 3695 aa14.39□□□□□ -0.11
LSM1-203ENST00000520755 ANKRD11Q6UB99 2663 aaPredicted RBP14.38□□□□□ -0.11
LSM1-203ENST00000520755 PRMT3O60678 531 aa14.38□□□□□ -0.11
LSM1-203ENST00000520755 BUD31P41223 144 aaPredicted RBP14.38□□□□□ -0.11
LSM1-203ENST00000520755 KLF10Q13118 480 aa14.38□□□□□ -0.11
LSM1-203ENST00000520755 SLC48A1Q6P1K1 146 aa14.38□□□□□ -0.11
LSM1-203ENST00000520755 PPP1R32Q7Z5V6 425 aa14.38□□□□□ -0.11
LSM1-203ENST00000520755 TREML1Q86YW5 311 aa14.38□□□□□ -0.11
LSM1-203ENST00000520755 SCUBE1Q8IWY4 988 aa14.38□□□□□ -0.11
LSM1-203ENST00000520755 OR7A2PQ8NGA2 310 aa14.38□□□□□ -0.11
LSM1-203ENST00000520755 DNAJB14Q8TBM8 379 aa14.38□□□□□ -0.11
LSM1-203ENST00000520755 ADAMTS17Q8TE56 1095 aa14.38□□□□□ -0.11
LSM1-203ENST00000520755 ADAMTS18Q8TE60 1221 aa14.38□□□□□ -0.11
LSM1-203ENST00000520755 ZNF764Q96H86 408 aaPredicted RBP14.38□□□□□ -0.11
LSM1-203ENST00000520755 CCDC106Q9BWC9 280 aa14.38□□□□□ -0.11
LSM1-203ENST00000520755 DPY30Q9C005 99 aa14.38□□□□□ -0.11
LSM1-203ENST00000520755 VN1R1Q9GZP7 353 aa14.38□□□□□ -0.11
LSM1-203ENST00000520755 REEP4Q9H6H4 257 aa14.38□□□□□ -0.11
LSM1-203ENST00000520755 SLC52A3Q9NQ40 469 aa14.38□□□□□ -0.11
LSM1-203ENST00000520755 MS4A12Q9NXJ0 267 aa14.38□□□□□ -0.11
LSM1-203ENST00000520755 ATP6V1HQ9UI12 483 aa14.38□□□□□ -0.11
LSM1-203ENST00000520755 WBP11Q9Y2W2 641 aaKnown RBP14.38□□□□□ -0.11
LSM1-203ENST00000520755 C1orf226A1L170 272 aa14.37□□□□□ -0.11
LSM1-203ENST00000520755 GABRR3A8MPY1 467 aa14.37□□□□□ -0.11
LSM1-203ENST00000520755 FGF17O60258 216 aa14.37□□□□□ -0.11
LSM1-203ENST00000520755 TBX19O60806 448 aa14.37□□□□□ -0.11
LSM1-203ENST00000520755 RECKO95980 971 aa14.37□□□□□ -0.11
LSM1-203ENST00000520755 IGHEP01854 428 aa14.37□□□□□ -0.11
LSM1-203ENST00000520755 PRPS1L1P21108 318 aa14.37□□□□□ -0.11
LSM1-203ENST00000520755 MMP11P24347 488 aa14.37□□□□□ -0.11
LSM1-203ENST00000520755 PIK3R1P27986 724 aa14.37□□□□□ -0.11
LSM1-203ENST00000520755 HPCAL1P37235 193 aa14.37□□□□□ -0.11
LSM1-203ENST00000520755 ALDH9A1P49189 494 aa14.37□□□□□ -0.11
LSM1-203ENST00000520755 STX1BP61266 288 aa14.37□□□□□ -0.11
LSM1-203ENST00000520755 PHC1P78364 1004 aa14.37□□□□□ -0.11
LSM1-203ENST00000520755 IRX1P78414 480 aaPredicted RBP14.37□□□□□ -0.11
LSM1-203ENST00000520755 DUSP2Q05923 314 aa14.37□□□□□ -0.11
LSM1-203ENST00000520755 RCAN2Q14206 197 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms