RNA–Protein interactions for RNA: ENST00000520002.5

CSMD1-206, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-206ENST00000520002 CYB5D2Q8WUJ1 264 aa8.38□□□□□ -1.07
CSMD1-206ENST00000520002 MYO5AQ9Y4I1 1855 aaKnown RBP8.38□□□□□ -1.07
CSMD1-206ENST00000520002 CCDC85CA6NKD9 419 aa8.38□□□□□ -1.07
CSMD1-206ENST00000520002 WASHC1A8K0Z3 465 aa8.38□□□□□ -1.07
CSMD1-206ENST00000520002 H1F0P07305 194 aaKnown RBP8.38□□□□□ -1.07
CSMD1-206ENST00000520002 CHATP28329 748 aa8.38□□□□□ -1.07
CSMD1-206ENST00000520002 HLCSP50747 726 aa8.38□□□□□ -1.07
CSMD1-206ENST00000520002 MFSD13AQ14CX5 517 aa8.38□□□□□ -1.07
CSMD1-206ENST00000520002 ZBTB44Q8NCP5 570 aa8.38□□□□□ -1.07
CSMD1-206ENST00000520002 CHDHQ8NE62 594 aaPredicted RBP8.38□□□□□ -1.07
CSMD1-206ENST00000520002 OR14A2Q96R54 314 aa8.38□□□□□ -1.07
CSMD1-206ENST00000520002 HAPLN3Q96S86 360 aa8.38□□□□□ -1.07
CSMD1-206ENST00000520002 NELL2Q99435 816 aa8.38□□□□□ -1.07
CSMD1-206ENST00000520002 P2RX2Q9UBL9 471 aa8.38□□□□□ -1.07
CSMD1-206ENST00000520002 SCP2D1Q9UJQ7 156 aa8.38□□□□□ -1.07
CSMD1-206ENST00000520002 MAFBQ9Y5Q3 323 aaPredicted RBP8.38□□□□□ -1.07
CSMD1-206ENST00000520002 TRAV20A0A0B4J274 112 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 A0A0G2JMP0 313 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 ERI3O43414 337 aaKnown RBP8.37□□□□□ -1.07
CSMD1-206ENST00000520002 JUNP05412 331 aaKnown RBP8.37□□□□□ -1.07
CSMD1-206ENST00000520002 LSSP48449 732 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 OLIG2Q13516 323 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 PUS10Q3MIT2 529 aaKnown RBP8.37□□□□□ -1.07
CSMD1-206ENST00000520002 SPARTQ8N0X7 666 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 OR4M2Q8NGB6 313 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 TBL1XR1Q9BZK7 514 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 OR6C2Q9NZP2 312 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 MTX2O75431 263 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 PNPP00491 289 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 MBP02144 154 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 PRPS1L1P21108 318 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 MPIP34949 423 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 ZNF527Q8NB42 609 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 OR5M3Q8NGP4 307 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 POC1BQ8TC44 478 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 CLIC1O00299 241 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 EIF3FO00303 357 aaPredicted RBP8.37□□□□□ -1.07
CSMD1-206ENST00000520002 SNAPC5O75971 98 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 ADH6P28332 368 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 HYAL2Q12891 473 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 TDGQ13569 410 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 IL12RB2Q99665 862 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 ZCCHC3Q9NUD5 404 aaKnown RBP8.37□□□□□ -1.07
CSMD1-206ENST00000520002 PIGVQ9NUD9 493 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 CFAP20Q9Y6A4 193 aaKnown RBP8.37□□□□□ -1.07
CSMD1-206ENST00000520002 MDC1Q14676 2089 aaKnown RBP8.37□□□□□ -1.07
CSMD1-206ENST00000520002 MRC1P22897 1456 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 TRBC2A0A5B9 178 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 SNAPINO95295 136 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 HMGN1P05114 100 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 RHOP08100 348 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 INHBEP58166 350 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 SLIT2O94813 1529 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 SCN11AQ9UI33 1791 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 KNDC1Q76NI1 1749 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 PRAMEF2O60811 474 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 IL1R2P27930 398 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 GPR19Q15760 415 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 NKAPLQ5M9Q1 402 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 GRHL2Q6ISB3 625 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 SUCNR1Q9BXA5 334 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 ADAM7Q9H2U9 754 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 TFB2MQ9H5Q4 396 aaKnown RBP8.37□□□□□ -1.07
CSMD1-206ENST00000520002 SIX2Q9NPC8 291 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 MKKSQ9NPJ1 570 aaPredicted RBP8.37□□□□□ -1.07
CSMD1-206ENST00000520002 TACSTD2P09758 323 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 ZNF16P17020 682 aaPredicted RBP8.37□□□□□ -1.07
CSMD1-206ENST00000520002 BDKRB1P46663 353 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 DSTNP60981 165 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 SVBPQ8N300 66 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 PPP4R1LQ9P1A2 415 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 LRFN1Q9P244 771 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 NUP188Q5SRE5 1749 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 A0A1W2PQL4 384 aaPredicted RBP8.37□□□□□ -1.07
CSMD1-206ENST00000520002 A0A1W2PRB8 838 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 LDB2O43679 373 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 ALPIP09923 528 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 MAD2L1BPQ15013 274 aaPredicted RBP8.37□□□□□ -1.07
CSMD1-206ENST00000520002 C2orf27AQ580R0 203 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 FBXO22Q8NEZ5 403 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 OR13C4Q8NGS5 318 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 CNOT9Q92600 299 aaKnown RBP8.37□□□□□ -1.07
CSMD1-206ENST00000520002 SLC25A44Q96H78 314 aaPredicted RBP8.37□□□□□ -1.07
CSMD1-206ENST00000520002 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.37□□□□□ -1.07
CSMD1-206ENST00000520002 UFSP2Q9NUQ7 469 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 WNT9AO14904 365 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 SNHG28P0DPA3 235 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 ACP5P13686 325 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 NDUFA6P56556 154 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 DAOAP59103 153 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 TCEANCQ8N8B7 351 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 SECISBP2Q96T21 854 aaKnown RBP8.37□□□□□ -1.07
CSMD1-206ENST00000520002 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.37□□□□□ -1.07
CSMD1-206ENST00000520002 ZFR2Q9UPR6 939 aaKnown RBP8.37□□□□□ -1.07
CSMD1-206ENST00000520002 ABCA1O95477 2261 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 VNN1O95497 513 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 ZDHHC11BP0C7U3 371 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 UNGP13051 313 aaPredicted RBP8.37□□□□□ -1.07
CSMD1-206ENST00000520002 CD34P28906 385 aa8.37□□□□□ -1.07
CSMD1-206ENST00000520002 MLLT3P42568 568 aaPredicted RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms