RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 FOXA2Q9Y261 457 aaPredicted RBP4.79□□□□□ -1.64
PTPN12-213ENST00000519553 PHF1O43189 567 aaPredicted RBP4.78□□□□□ -1.64
PTPN12-213ENST00000519553 BCL2L11O43521 198 aa4.78□□□□□ -1.64
PTPN12-213ENST00000519553 CPA3P15088 417 aa4.78□□□□□ -1.64
PTPN12-213ENST00000519553 CTNNB1P35222 781 aa4.78□□□□□ -1.64
PTPN12-213ENST00000519553 ID1P41134 155 aa4.78□□□□□ -1.64
PTPN12-213ENST00000519553 GIT2Q14161 759 aa4.78□□□□□ -1.64
PTPN12-213ENST00000519553 SLC17A1Q14916 467 aa4.78□□□□□ -1.64
PTPN12-213ENST00000519553 HEPACAMQ14CZ8 416 aa4.78□□□□□ -1.64
PTPN12-213ENST00000519553 MORF4L2Q15014 288 aa4.78□□□□□ -1.64
PTPN12-213ENST00000519553 SGCBQ16585 318 aa4.78□□□□□ -1.64
PTPN12-213ENST00000519553 WSCD2Q2TBF2 565 aa4.78□□□□□ -1.64
PTPN12-213ENST00000519553 IFI44LQ53G44 452 aa4.78□□□□□ -1.64
PTPN12-213ENST00000519553 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.78□□□□□ -1.64
PTPN12-213ENST00000519553 LPCAT1Q8NF37 534 aa4.78□□□□□ -1.64
PTPN12-213ENST00000519553 MRPL24Q96A35 216 aaKnown RBP4.78□□□□□ -1.64
PTPN12-213ENST00000519553 PSMB7Q99436 277 aa4.78□□□□□ -1.64
PTPN12-213ENST00000519553 AKIRIN1Q9H9L7 192 aaPredicted RBP4.78□□□□□ -1.64
PTPN12-213ENST00000519553 FBXW2Q9UKT8 454 aa4.78□□□□□ -1.64
PTPN12-213ENST00000519553 RARRES3Q9UL19 164 aa4.78□□□□□ -1.64
PTPN12-213ENST00000519553 SH3PXD2BA1X283 911 aa4.77□□□□□ -1.65
PTPN12-213ENST00000519553 BCLAF3A2AJT9 711 aaKnown RBP4.77□□□□□ -1.65
PTPN12-213ENST00000519553 TMCO5BA8MYB1 307 aa4.77□□□□□ -1.65
PTPN12-213ENST00000519553 CACNB4O00305 520 aaPredicted RBP4.77□□□□□ -1.65
PTPN12-213ENST00000519553 OR6A2O95222 327 aa4.77□□□□□ -1.65
PTPN12-213ENST00000519553 GSTA2P09210 222 aa4.77□□□□□ -1.65
PTPN12-213ENST00000519553 CT45A8P0DMV1 189 aa4.77□□□□□ -1.65
PTPN12-213ENST00000519553 CT45A9P0DMV2 189 aa4.77□□□□□ -1.65
PTPN12-213ENST00000519553 HIGD2BQ4VC39 106 aa4.77□□□□□ -1.65
PTPN12-213ENST00000519553 CT45A2Q5DJT8 189 aa4.77□□□□□ -1.65
PTPN12-213ENST00000519553 DCAF12Q5T6F0 453 aa4.77□□□□□ -1.65
PTPN12-213ENST00000519553 AGAP7PQ5VUJ5 663 aa4.77□□□□□ -1.65
PTPN12-213ENST00000519553 LEMD1Q68G75 181 aa4.77□□□□□ -1.65
PTPN12-213ENST00000519553 EMBQ6PCB8 327 aa4.77□□□□□ -1.65
PTPN12-213ENST00000519553 ITIH5Q86UX2 942 aa4.77□□□□□ -1.65
PTPN12-213ENST00000519553 ZNF781Q8N8C0 355 aa4.77□□□□□ -1.65
PTPN12-213ENST00000519553 RTL3Q8N8U3 475 aaKnown RBP4.77□□□□□ -1.65
PTPN12-213ENST00000519553 RUNDC3BQ96NL0 473 aa4.77□□□□□ -1.65
PTPN12-213ENST00000519553 EXOC7Q9UPT5 735 aa4.77□□□□□ -1.65
PTPN12-213ENST00000519553 A0A1W2PRV1 198 aa4.76□□□□□ -1.65
PTPN12-213ENST00000519553 NEDD8-MDP1E9PL57 170 aa4.76□□□□□ -1.65
PTPN12-213ENST00000519553 PSMD3O43242 534 aa4.76□□□□□ -1.65
PTPN12-213ENST00000519553 KIAA0513O60268 411 aa4.76□□□□□ -1.65
PTPN12-213ENST00000519553 GAS8O95995 478 aa4.76□□□□□ -1.65
PTPN12-213ENST00000519553 MELTFP08582 738 aa4.76□□□□□ -1.65
PTPN12-213ENST00000519553 CYP3A5P20815 502 aa4.76□□□□□ -1.65
PTPN12-213ENST00000519553 CASP3P42574 277 aa4.76□□□□□ -1.65
PTPN12-213ENST00000519553 HCFC1P51610 2035 aa4.76□□□□□ -1.65
PTPN12-213ENST00000519553 KIAA1024LP59773 190 aa4.76□□□□□ -1.65
PTPN12-213ENST00000519553 HSPA14Q0VDF9 509 aa4.76□□□□□ -1.65
PTPN12-213ENST00000519553 GK2Q14410 553 aaPredicted RBP4.76□□□□□ -1.65
PTPN12-213ENST00000519553 STX1AQ16623 288 aa4.76□□□□□ -1.65
PTPN12-213ENST00000519553 PCK2Q16822 640 aa4.76□□□□□ -1.65
PTPN12-213ENST00000519553 CCDC71Q8IV32 467 aaPredicted RBP4.76□□□□□ -1.65
PTPN12-213ENST00000519553 STHQ8IWL8 128 aa4.76□□□□□ -1.65
PTPN12-213ENST00000519553 GVQW1Q8N7I0 195 aa4.76□□□□□ -1.65
PTPN12-213ENST00000519553 SIDT2Q8NBJ9 832 aaKnown RBP4.76□□□□□ -1.65
PTPN12-213ENST00000519553 UBTD2Q8WUN7 234 aa4.76□□□□□ -1.65
PTPN12-213ENST00000519553 PNPLA2Q96AD5 504 aa4.76□□□□□ -1.65
PTPN12-213ENST00000519553 CDHR1Q96JP9 859 aa4.76□□□□□ -1.65
PTPN12-213ENST00000519553 ANKRD27Q96NW4 1050 aa4.76□□□□□ -1.65
PTPN12-213ENST00000519553 MARCH7Q9H992 704 aa4.76□□□□□ -1.65
PTPN12-213ENST00000519553 DNAJC11Q9NVH1 559 aa4.76□□□□□ -1.65
PTPN12-213ENST00000519553 CWC25Q9NXE8 425 aaPredicted RBP4.76□□□□□ -1.65
PTPN12-213ENST00000519553 MAD2L2Q9UI95 211 aa4.76□□□□□ -1.65
PTPN12-213ENST00000519553 A0A1B0GTH9 108 aa4.75□□□□□ -1.65
PTPN12-213ENST00000519553 TEX48A0A1B0GUV7 120 aa4.75□□□□□ -1.65
PTPN12-213ENST00000519553 RTN2O75298 545 aa4.75□□□□□ -1.65
PTPN12-213ENST00000519553 ANXA9O76027 345 aa4.75□□□□□ -1.65
PTPN12-213ENST00000519553 VENTXO95231 258 aa4.75□□□□□ -1.65
PTPN12-213ENST00000519553 HPP00738 406 aa4.75□□□□□ -1.65
PTPN12-213ENST00000519553 IGHG3P01860 377 aa4.75□□□□□ -1.65
PTPN12-213ENST00000519553 CCDC159P0C7I6 412 aa4.75□□□□□ -1.65
PTPN12-213ENST00000519553 FOSL2P15408 326 aa4.75□□□□□ -1.65
PTPN12-213ENST00000519553 MTIF2P46199 727 aaKnown RBP4.75□□□□□ -1.65
PTPN12-213ENST00000519553 SMSP52788 366 aa4.75□□□□□ -1.65
PTPN12-213ENST00000519553 UCP2P55851 309 aa4.75□□□□□ -1.65
PTPN12-213ENST00000519553 KCNK10P57789 538 aa4.75□□□□□ -1.65
PTPN12-213ENST00000519553 TMEM44Q2T9K0 475 aa4.75□□□□□ -1.65
PTPN12-213ENST00000519553 EPC2Q52LR7 807 aa4.75□□□□□ -1.65
PTPN12-213ENST00000519553 EIPR1Q53HC9 387 aa4.75□□□□□ -1.65
PTPN12-213ENST00000519553 Q6ZRG5 221 aa4.75□□□□□ -1.65
PTPN12-213ENST00000519553 TMUB2Q71RG4 321 aa4.75□□□□□ -1.65
PTPN12-213ENST00000519553 CCDC91Q7Z6B0 441 aa4.75□□□□□ -1.65
PTPN12-213ENST00000519553 SLC39A11Q8N1S5 342 aa4.75□□□□□ -1.65
PTPN12-213ENST00000519553 SFRP1Q8N474 314 aa4.75□□□□□ -1.65
PTPN12-213ENST00000519553 C10orf53Q8N6V4 93 aa4.75□□□□□ -1.65
PTPN12-213ENST00000519553 GOLGA5Q8TBA6 731 aa4.75□□□□□ -1.65
PTPN12-213ENST00000519553 TCP11Q8WWU5 503 aa4.75□□□□□ -1.65
PTPN12-213ENST00000519553 GLYATL1Q969I3 302 aa4.75□□□□□ -1.65
PTPN12-213ENST00000519553 HSD17B14Q9BPX1 270 aa4.75□□□□□ -1.65
PTPN12-213ENST00000519553 RBM24Q9BX46 236 aaKnown RBP4.75□□□□□ -1.65
PTPN12-213ENST00000519553 MRPL9Q9BYD2 267 aaKnown RBP4.75□□□□□ -1.65
PTPN12-213ENST00000519553 NT5DC2Q9H857 520 aa4.75□□□□□ -1.65
PTPN12-213ENST00000519553 TEKT2Q9UIF3 430 aa4.75□□□□□ -1.65
PTPN12-213ENST00000519553 FBXO7Q9Y3I1 522 aa4.75□□□□□ -1.65
PTPN12-213ENST00000519553 MT-ND1P03886 318 aa4.74□□□□□ -1.65
PTPN12-213ENST00000519553 OR9G9P0C7N8 305 aa4.74□□□□□ -1.65
PTPN12-213ENST00000519553 TPBGLP0DKB5 382 aa4.74□□□□□ -1.65
PTPN12-213ENST00000519553 CYLC2Q14093 348 aaPredicted RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms