RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 LRMDAQ9H2I8 198 aa11.65□□□□□ -0.54
TRAPPC9-206ENST00000519482 KLHL31Q9H511 634 aa11.65□□□□□ -0.54
TRAPPC9-206ENST00000519482 CDCP1Q9H5V8 836 aa11.65□□□□□ -0.54
TRAPPC9-206ENST00000519482 NT5DC2Q9H857 520 aa11.65□□□□□ -0.54
TRAPPC9-206ENST00000519482 IGSF5Q9NSI5 407 aa11.65□□□□□ -0.54
TRAPPC9-206ENST00000519482 ANKRD10Q9NXR5 420 aa11.65□□□□□ -0.54
TRAPPC9-206ENST00000519482 GPRC5BQ9NZH0 403 aa11.65□□□□□ -0.54
TRAPPC9-206ENST00000519482 LRFN1Q9P244 771 aa11.65□□□□□ -0.54
TRAPPC9-206ENST00000519482 TMCO1Q9UM00 188 aa11.65□□□□□ -0.54
TRAPPC9-206ENST00000519482 MMACHCQ9Y4U1 282 aa11.65□□□□□ -0.54
TRAPPC9-206ENST00000519482 KLF2Q9Y5W3 355 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC9-206ENST00000519482 PCNX1Q96RV3 2341 aa11.65□□□□□ -0.54
TRAPPC9-206ENST00000519482 C4orf51C9J302 202 aa11.64□□□□□ -0.55
TRAPPC9-206ENST00000519482 PRSS44E7EML9 344 aa11.64□□□□□ -0.55
TRAPPC9-206ENST00000519482 FCHO1O14526 889 aa11.64□□□□□ -0.55
TRAPPC9-206ENST00000519482 ITM2AO43736 263 aa11.64□□□□□ -0.55
TRAPPC9-206ENST00000519482 MAN1A2O60476 641 aa11.64□□□□□ -0.55
TRAPPC9-206ENST00000519482 DLX3O60479 287 aa11.64□□□□□ -0.55
TRAPPC9-206ENST00000519482 WISP3O95389 354 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC9-206ENST00000519482 CCDC166P0CW27 439 aa11.64□□□□□ -0.55
TRAPPC9-206ENST00000519482 T-ENOLP0DO92 83 aa11.64□□□□□ -0.55
TRAPPC9-206ENST00000519482 TFEBP19484 476 aa11.64□□□□□ -0.55
TRAPPC9-206ENST00000519482 MAOAP21397 527 aa11.64□□□□□ -0.55
TRAPPC9-206ENST00000519482 CALB2P22676 271 aa11.64□□□□□ -0.55
TRAPPC9-206ENST00000519482 SERPINB3P29508 390 aa11.64□□□□□ -0.55
TRAPPC9-206ENST00000519482 ADSLP30566 484 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC9-206ENST00000519482 GGT5P36269 586 aa11.64□□□□□ -0.55
TRAPPC9-206ENST00000519482 GDF5P43026 501 aa11.64□□□□□ -0.55
TRAPPC9-206ENST00000519482 RPL14P50914 215 aaKnown RBP11.64□□□□□ -0.55
TRAPPC9-206ENST00000519482 CASP6P55212 293 aa11.64□□□□□ -0.55
TRAPPC9-206ENST00000519482 ATP6V0D1P61421 351 aa11.64□□□□□ -0.55
TRAPPC9-206ENST00000519482 ALDH6A1Q02252 535 aaKnown RBP11.64□□□□□ -0.55
TRAPPC9-206ENST00000519482 RCN2Q14257 317 aa11.64□□□□□ -0.55
TRAPPC9-206ENST00000519482 CFAP157Q5JU67 520 aa11.64□□□□□ -0.55
TRAPPC9-206ENST00000519482 CES4AQ5XG92 561 aa11.64□□□□□ -0.55
TRAPPC9-206ENST00000519482 SP5Q6BEB4 398 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC9-206ENST00000519482 RPTNQ6XPR3 784 aa11.64□□□□□ -0.55
TRAPPC9-206ENST00000519482 GALNTL5Q7Z4T8 443 aa11.64□□□□□ -0.55
TRAPPC9-206ENST00000519482 KRT78Q8N1N4 520 aa11.64□□□□□ -0.55
TRAPPC9-206ENST00000519482 ARMC10Q8N2F6 343 aa11.64□□□□□ -0.55
TRAPPC9-206ENST00000519482 ZNF808Q8N4W9 903 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC9-206ENST00000519482 NFAM1Q8NET5 270 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC9-206ENST00000519482 CCDC120Q96HB5 630 aa11.64□□□□□ -0.55
TRAPPC9-206ENST00000519482 GPR137Q96N19 417 aa11.64□□□□□ -0.55
TRAPPC9-206ENST00000519482 SORT1Q99523 831 aa11.64□□□□□ -0.55
TRAPPC9-206ENST00000519482 HES7Q9BYE0 225 aa11.64□□□□□ -0.55
TRAPPC9-206ENST00000519482 C20orf27Q9GZN8 174 aa11.64□□□□□ -0.55
TRAPPC9-206ENST00000519482 AICDAQ9GZX7 198 aa11.64□□□□□ -0.55
TRAPPC9-206ENST00000519482 RHBGQ9H310 441 aa11.64□□□□□ -0.55
TRAPPC9-206ENST00000519482 EHD1Q9H4M9 534 aa11.64□□□□□ -0.55
TRAPPC9-206ENST00000519482 RUBCNLQ9H714 662 aa11.64□□□□□ -0.55
TRAPPC9-206ENST00000519482 TRIM45Q9H8W5 580 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC9-206ENST00000519482 NECTIN3Q9NQS3 549 aa11.64□□□□□ -0.55
TRAPPC9-206ENST00000519482 KLHL1Q9NR64 748 aa11.64□□□□□ -0.55
TRAPPC9-206ENST00000519482 CPSF2Q9P2I0 782 aaKnown RBP11.64□□□□□ -0.55
TRAPPC9-206ENST00000519482 APCP25054 2843 aa11.64□□□□□ -0.55
TRAPPC9-206ENST00000519482 A0A088AWK7 358 aa11.63□□□□□ -0.55
TRAPPC9-206ENST00000519482 LRIT2A6NDA9 550 aa11.63□□□□□ -0.55
TRAPPC9-206ENST00000519482 SYNDIG1LA6NDD5 238 aa11.63□□□□□ -0.55
TRAPPC9-206ENST00000519482 CLGNO14967 610 aa11.63□□□□□ -0.55
TRAPPC9-206ENST00000519482 HDAC3O15379 428 aa11.63□□□□□ -0.55
TRAPPC9-206ENST00000519482 MGRN1O60291 552 aa11.63□□□□□ -0.55
TRAPPC9-206ENST00000519482 NME2P1O60361 137 aa11.63□□□□□ -0.55
TRAPPC9-206ENST00000519482 SLC19A2O60779 497 aa11.63□□□□□ -0.55
TRAPPC9-206ENST00000519482 CLEC3AO75596 197 aa11.63□□□□□ -0.55
TRAPPC9-206ENST00000519482 SBK3P0C264 359 aa11.63□□□□□ -0.55
TRAPPC9-206ENST00000519482 ESRRAP11474 423 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC9-206ENST00000519482 IMPDH1P20839 514 aa11.63□□□□□ -0.55
TRAPPC9-206ENST00000519482 ZNF10P21506 573 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC9-206ENST00000519482 NME2P22392 152 aa11.63□□□□□ -0.55
TRAPPC9-206ENST00000519482 TPP2P29144 1249 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC9-206ENST00000519482 TRHRP34981 398 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC9-206ENST00000519482 CYB561P49447 251 aa11.63□□□□□ -0.55
TRAPPC9-206ENST00000519482 IDH3AP50213 366 aa11.63□□□□□ -0.55
TRAPPC9-206ENST00000519482 NAGLUP54802 743 aa11.63□□□□□ -0.55
TRAPPC9-206ENST00000519482 HSD17B7P56937 341 aa11.63□□□□□ -0.55
TRAPPC9-206ENST00000519482 MLF1P58340 268 aa11.63□□□□□ -0.55
TRAPPC9-206ENST00000519482 BTN3A2P78410 334 aa11.63□□□□□ -0.55
TRAPPC9-206ENST00000519482 SRSF11Q05519 484 aaKnown RBP11.63□□□□□ -0.55
TRAPPC9-206ENST00000519482 SLBPQ14493 270 aaKnown RBP eCLIP11.63□□□□□ -0.55
TRAPPC9-206ENST00000519482 SPRED3Q2MJR0 410 aa11.63□□□□□ -0.55
TRAPPC9-206ENST00000519482 EPGNQ6UW88 154 aa11.63□□□□□ -0.55
TRAPPC9-206ENST00000519482 ZCCHC23Q6ZST2 131 aa11.63□□□□□ -0.55
TRAPPC9-206ENST00000519482 MRGPRGQ86SM5 289 aa11.63□□□□□ -0.55
TRAPPC9-206ENST00000519482 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.63□□□□□ -0.552e-6■■■■■ 122.8
TRAPPC9-206ENST00000519482 KIF2BQ8N4N8 673 aa11.63□□□□□ -0.55
TRAPPC9-206ENST00000519482 ADAMTS18Q8TE60 1221 aa11.63□□□□□ -0.55
TRAPPC9-206ENST00000519482 ITLN2Q8WWU7 325 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC9-206ENST00000519482 MARVELD3Q96A59 401 aa11.63□□□□□ -0.55
TRAPPC9-206ENST00000519482 MS4A6EQ96DS6 147 aa11.63□□□□□ -0.55
TRAPPC9-206ENST00000519482 FRMD6Q96NE9 622 aa11.63□□□□□ -0.55
TRAPPC9-206ENST00000519482 DEFB126Q9BYW3 111 aa11.63□□□□□ -0.55
TRAPPC9-206ENST00000519482 MMADHCQ9H3L0 296 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC9-206ENST00000519482 ZNF395Q9H8N7 513 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC9-206ENST00000519482 DNAJC11Q9NVH1 559 aa11.63□□□□□ -0.55
TRAPPC9-206ENST00000519482 PNPOQ9NVS9 261 aa11.63□□□□□ -0.55
TRAPPC9-206ENST00000519482 TRIM33Q9UPN9 1127 aa11.63□□□□□ -0.55
TRAPPC9-206ENST00000519482 ZNF835Q9Y2P0 537 aa11.63□□□□□ -0.55
TRAPPC9-206ENST00000519482 GOLGA8QA0A0J9YX86 632 aa11.62□□□□□ -0.55
TRAPPC9-206ENST00000519482 GOLGA8OA6NCC3 632 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms