RNA–Protein interactions for RNA: ENST00000519253.5

PCM1-212, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 6,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-212ENST00000519253 RAB40BQ12829 278 aa8.14□□□□□ -1.11
PCM1-212ENST00000519253 SLC35F1Q5T1Q4 408 aa8.14□□□□□ -1.11
PCM1-212ENST00000519253 FAHD1Q6P587 224 aa8.14□□□□□ -1.11
PCM1-212ENST00000519253 VN1R5Q7Z5H4 357 aa8.14□□□□□ -1.11
PCM1-212ENST00000519253 IL17RDQ8NFM7 739 aa8.14□□□□□ -1.11
PCM1-212ENST00000519253 OR4K5Q8NGD3 323 aa8.14□□□□□ -1.11
PCM1-212ENST00000519253 GATAD2BQ8WXI9 593 aa8.14□□□□□ -1.11
PCM1-212ENST00000519253 COL26A1Q96A83 441 aa8.14□□□□□ -1.11
PCM1-212ENST00000519253 PDCD10Q9BUL8 212 aa8.14□□□□□ -1.11
PCM1-212ENST00000519253 TRAPPC4Q9Y296 219 aa8.14□□□□□ -1.11
PCM1-212ENST00000519253 IGLV3-10A0A075B6K4 115 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 IQCMA0A1B0GVH7 501 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 CARNS1A5YM72 827 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 UNCXA6NJT0 531 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 UPK3BL1B0FP48 263 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 UPK3BL2E5RIL1 263 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 MTX2O75431 263 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 PRAMEF12O95522 483 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 MMP2P08253 660 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 SLC35G4P0C7Q5 338 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 KELP23276 732 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 CHMP24386 653 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 CDKN2CP42773 168 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 FKBP1BP68106 108 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 SEMG2Q02383 582 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 HACD4Q5VWC8 232 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 GRHL2Q6ISB3 625 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 BRAT1Q6PJG6 821 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 CHMP1BQ7LBR1 199 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 COMMD7Q86VX2 200 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 GID4Q8IVV7 300 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.13□□□□□ -1.11
PCM1-212ENST00000519253 OR4C6Q8NH72 309 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 NPLOC4Q8TAT6 608 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 SLC5A11Q8WWX8 675 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 IKZF5Q9H5V7 419 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 ITM2BQ9Y287 266 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 NAALAD2Q9Y3Q0 740 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 DUXAA6NLW8 204 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 I6L893 689 aaPredicted RBP8.13□□□□□ -1.11
PCM1-212ENST00000519253 M0R129 80 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 HOXC11O43248 304 aaPredicted RBP8.13□□□□□ -1.11
PCM1-212ENST00000519253 PRODHO43272 600 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 PIPP12273 146 aaPredicted RBP8.13□□□□□ -1.11
PCM1-212ENST00000519253 ETV6P41212 452 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 MAN2A2P49641 1150 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 RRAS2P62070 204 aaPredicted RBP8.13□□□□□ -1.11
PCM1-212ENST00000519253 PYHIN1Q6K0P9 492 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 LHFPL3Q86UP9 236 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 ZFAND1Q8TCF1 268 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 SECISBP2Q96T21 854 aaKnown RBP8.13□□□□□ -1.11
PCM1-212ENST00000519253 RC3H2Q9HBD1 1191 aaKnown RBP8.13□□□□□ -1.11
PCM1-212ENST00000519253 PCDHGA2Q9Y5H1 932 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 A0A1B0GTL3 188 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 HYKKA2RU49 373 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 POLR1CO15160 346 aaPredicted RBP8.13□□□□□ -1.11
PCM1-212ENST00000519253 C1QBP02746 253 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 H2AFB2P0C5Z0 115 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 ACPPP15309 386 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 HSD17B2P37059 387 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 SNTB2Q13425 540 aaKnown RBP8.13□□□□□ -1.11
PCM1-212ENST00000519253 TIGD3Q6B0B8 471 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 OAFQ86UD1 273 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 CCDC190Q86UF4 302 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 L3MBTL4Q8NA19 623 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 FAM98AQ8NCA5 519 aaKnown RBP8.13□□□□□ -1.11
PCM1-212ENST00000519253 HUS1BQ8NHY5 278 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 RAB8BQ92930 207 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 TMEM27Q9HBJ8 222 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 POLE3Q9NRF9 147 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 MARK1Q9P0L2 795 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 KCNK2O95069 426 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 GBAP04062 536 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 C1GALT1C1LP0DN25 315 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 HOXD9P28356 352 aaPredicted RBP8.13□□□□□ -1.11
PCM1-212ENST00000519253 WEE1P30291 646 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 RPL4P36578 427 aaKnown RBP8.13□□□□□ -1.11
PCM1-212ENST00000519253 NUDT1P36639 197 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 PRAMEF14Q5SWL7 426 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 PRAMEF13Q5VWM6 474 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 PM20D2Q8IYS1 436 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 OR8K5Q8NH50 307 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 HDHD5Q9BXW7 423 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 OR51V1Q9H2C8 321 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 CAPN10Q9HC96 672 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 RABL2AQ9UBK7 228 aaPredicted RBP8.13□□□□□ -1.11
PCM1-212ENST00000519253 UTS2RQ9UKP6 389 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 RABL2BQ9UNT1 228 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 TEX13CA0A0J9YWL9 993 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 OR14I1A6ND48 311 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 PTBP1P26599 531 aaKnown RBP eCLIP8.13□□□□□ -1.113e-7■■■■□ 21.1
PCM1-212ENST00000519253 RGRP47804 291 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 AVPR1BP47901 424 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 GBX2P52951 348 aaPredicted RBP8.13□□□□□ -1.11
PCM1-212ENST00000519253 EIPR1Q53HC9 387 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 BCL2L15Q5TBC7 163 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 SLC22A10Q63ZE4 541 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 SYNPOQ8N3V7 929 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 RAET1EQ8TD07 263 aa8.13□□□□□ -1.11
PCM1-212ENST00000519253 EQTNQ9NQ60 294 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms