RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-209ENST00000519141 CLEC4FQ8N1N0 589 aa11.7□□□□□ -0.54
SPIDR-209ENST00000519141 C10orf111Q8N326 155 aa11.7□□□□□ -0.54
SPIDR-209ENST00000519141 OR5AK3PQ8NH89 298 aa11.7□□□□□ -0.54
SPIDR-209ENST00000519141 FIG4Q92562 907 aa11.7□□□□□ -0.54
SPIDR-209ENST00000519141 NCLNQ969V3 563 aa11.7□□□□□ -0.54
SPIDR-209ENST00000519141 ZNF285Q96NJ3 590 aa11.7□□□□□ -0.54
SPIDR-209ENST00000519141 EFHD1Q9BUP0 239 aa11.7□□□□□ -0.54
SPIDR-209ENST00000519141 CXorf36Q9H7Y0 433 aa11.7□□□□□ -0.54
SPIDR-209ENST00000519141 KCMF1Q9P0J7 381 aa11.7□□□□□ -0.54
SPIDR-209ENST00000519141 ACSL6Q9UKU0 697 aa11.7□□□□□ -0.54
SPIDR-209ENST00000519141 RAB23Q9ULC3 237 aa11.7□□□□□ -0.54
SPIDR-209ENST00000519141 SNX8Q9Y5X2 465 aa11.7□□□□□ -0.54
SPIDR-209ENST00000519141 U3KQA8 63 aa11.7□□□□□ -0.54
SPIDR-209ENST00000519141 DHRS12A0PJE2 317 aa11.69□□□□□ -0.54
SPIDR-209ENST00000519141 EME2A4GXA9 379 aaPredicted RBP11.69□□□□□ -0.54
SPIDR-209ENST00000519141 CXCR6O00574 342 aa11.69□□□□□ -0.54
SPIDR-209ENST00000519141 PCDHGA12O60330 932 aa11.69□□□□□ -0.54
SPIDR-209ENST00000519141 C1QCP02747 245 aa11.69□□□□□ -0.54
SPIDR-209ENST00000519141 GPIP06744 558 aa11.69□□□□□ -0.54
SPIDR-209ENST00000519141 CTSBP07858 339 aa11.69□□□□□ -0.54
SPIDR-209ENST00000519141 CSNK2A2P19784 350 aaPredicted RBP11.69□□□□□ -0.54
SPIDR-209ENST00000519141 SLC7A1P30825 629 aa11.69□□□□□ -0.54
SPIDR-209ENST00000519141 GPC1P35052 558 aa11.69□□□□□ -0.54
SPIDR-209ENST00000519141 PTDSS1P48651 473 aaKnown RBP11.69□□□□□ -0.54
SPIDR-209ENST00000519141 SEPHS1P49903 392 aa11.69□□□□□ -0.54
SPIDR-209ENST00000519141 NCBP2P52298 156 aaKnown RBP eCLIP11.69□□□□□ -0.54
SPIDR-209ENST00000519141 RGNQ15493 299 aa11.69□□□□□ -0.54
SPIDR-209ENST00000519141 SPDYE7PQ495Y7 208 aa11.69□□□□□ -0.54
SPIDR-209ENST00000519141 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.69□□□□□ -0.54
SPIDR-209ENST00000519141 CPZQ66K79 652 aa11.69□□□□□ -0.54
SPIDR-209ENST00000519141 NIPAL1Q6NVV3 410 aa11.69□□□□□ -0.54
SPIDR-209ENST00000519141 KMT5CQ86Y97 462 aa11.69□□□□□ -0.54
SPIDR-209ENST00000519141 SAMD14Q8IZD0 417 aaPredicted RBP11.69□□□□□ -0.54
SPIDR-209ENST00000519141 ARHGEF39Q8N4T4 335 aa11.69□□□□□ -0.54
SPIDR-209ENST00000519141 FAM162AQ96A26 154 aa11.69□□□□□ -0.54
SPIDR-209ENST00000519141 CNRIP1Q96F85 164 aaPredicted RBP11.69□□□□□ -0.54
SPIDR-209ENST00000519141 DUS3LQ96G46 650 aaKnown RBP11.69□□□□□ -0.54
SPIDR-209ENST00000519141 AMDHD1Q96NU7 426 aa11.69□□□□□ -0.54
SPIDR-209ENST00000519141 CSF3RQ99062 836 aa11.69□□□□□ -0.54
SPIDR-209ENST00000519141 NPLQ9BXD5 320 aaPredicted RBP11.69□□□□□ -0.54
SPIDR-209ENST00000519141 TRIM4Q9C037 500 aa11.69□□□□□ -0.54
SPIDR-209ENST00000519141 ARRDC1-AS1Q9H2J1 176 aa11.69□□□□□ -0.54
SPIDR-209ENST00000519141 GLIPR2Q9H4G4 154 aa11.69□□□□□ -0.54
SPIDR-209ENST00000519141 RPF2Q9H7B2 306 aaKnown RBP11.69□□□□□ -0.54
SPIDR-209ENST00000519141 PRDM9Q9NQV7 894 aa11.69□□□□□ -0.54
SPIDR-209ENST00000519141 TMEM9Q9P0T7 183 aa11.69□□□□□ -0.54
SPIDR-209ENST00000519141 SEMA5BQ9P283 1151 aa11.69□□□□□ -0.54
SPIDR-209ENST00000519141 NCDNQ9UBB6 729 aa11.69□□□□□ -0.54
SPIDR-209ENST00000519141 CES1P1Q9UKY3 287 aa11.69□□□□□ -0.54
SPIDR-209ENST00000519141 AP4S1Q9Y587 144 aa11.69□□□□□ -0.54
SPIDR-209ENST00000519141 PCDHGA5Q9Y5G8 931 aa11.69□□□□□ -0.54
SPIDR-209ENST00000519141 ZNF780BQ9Y6R6 833 aa11.69□□□□□ -0.54
SPIDR-209ENST00000519141 ADAMTS20P59510 1910 aa11.69□□□□□ -0.54
SPIDR-209ENST00000519141 TCRBV5S2A0A599 114 aa11.68□□□□□ -0.54
SPIDR-209ENST00000519141 WASHC1A8K0Z3 465 aa11.68□□□□□ -0.54
SPIDR-209ENST00000519141 MYO1GB0I1T2 1018 aa11.68□□□□□ -0.54
SPIDR-209ENST00000519141 SGK494L7N484 410 aa11.68□□□□□ -0.54
SPIDR-209ENST00000519141 TGM1P22735 817 aa11.68□□□□□ -0.54
SPIDR-209ENST00000519141 CRATP43155 626 aa11.68□□□□□ -0.54
SPIDR-209ENST00000519141 CDK9P50750 372 aaKnown RBP11.68□□□□□ -0.54
SPIDR-209ENST00000519141 SHC2P98077 582 aa11.68□□□□□ -0.54
SPIDR-209ENST00000519141 DAB2P98082 770 aa11.68□□□□□ -0.54
SPIDR-209ENST00000519141 VAC14Q08AM6 782 aa11.68□□□□□ -0.54
SPIDR-209ENST00000519141 FADDQ13158 208 aa11.68□□□□□ -0.54
SPIDR-209ENST00000519141 VMACQ2NL98 169 aa11.68□□□□□ -0.54
SPIDR-209ENST00000519141 PERM1Q5SV97 790 aa11.68□□□□□ -0.54
SPIDR-209ENST00000519141 TMTC4Q5T4D3 741 aa11.68□□□□□ -0.54
SPIDR-209ENST00000519141 GARNL3Q5VVW2 1013 aa11.68□□□□□ -0.54
SPIDR-209ENST00000519141 LRRC74BQ6ZQY2 392 aa11.68□□□□□ -0.54
SPIDR-209ENST00000519141 ZZZ3Q8IYH5 903 aa11.68□□□□□ -0.54
SPIDR-209ENST00000519141 CA13Q8N1Q1 262 aa11.68□□□□□ -0.54
SPIDR-209ENST00000519141 PQLC1Q8N2U9 271 aa11.68□□□□□ -0.54
SPIDR-209ENST00000519141 TTC29Q8NA56 475 aaPredicted RBP11.68□□□□□ -0.54
SPIDR-209ENST00000519141 OR52N2Q8NGI0 321 aa11.68□□□□□ -0.54
SPIDR-209ENST00000519141 OR9A4Q8NGU2 314 aa11.68□□□□□ -0.54
SPIDR-209ENST00000519141 PSMA8Q8TAA3 256 aa11.68□□□□□ -0.54
SPIDR-209ENST00000519141 C10orf90Q96M02 699 aa11.68□□□□□ -0.54
SPIDR-209ENST00000519141 NUDT22Q9BRQ3 303 aa11.68□□□□□ -0.54
SPIDR-209ENST00000519141 SMOC1Q9H4F8 434 aa11.68□□□□□ -0.54
SPIDR-209ENST00000519141 GORASP2Q9H8Y8 452 aa11.68□□□□□ -0.54
SPIDR-209ENST00000519141 SEMA3GQ9NS98 782 aa11.68□□□□□ -0.54
SPIDR-209ENST00000519141 C6orf203Q9P0P8 240 aaPredicted RBP11.68□□□□□ -0.54
SPIDR-209ENST00000519141 CLCA2Q9UQC9 943 aa11.68□□□□□ -0.54
SPIDR-209ENST00000519141 NCOR2Q9Y618 2525 aa11.68□□□□□ -0.54
SPIDR-209ENST00000519141 SPTBP11277 2137 aa11.68□□□□□ -0.54
SPIDR-209ENST00000519141 HYKKA2RU49 373 aa11.68□□□□□ -0.54
SPIDR-209ENST00000519141 A8MU76 341 aa11.68□□□□□ -0.54
SPIDR-209ENST00000519141 KHNYNO15037 678 aaKnown RBP11.68□□□□□ -0.54
SPIDR-209ENST00000519141 TOX3O15405 576 aaPredicted RBP11.68□□□□□ -0.54
SPIDR-209ENST00000519141 RDH16O75452 317 aa11.68□□□□□ -0.54
SPIDR-209ENST00000519141 KCNK5O95279 499 aa11.68□□□□□ -0.54
SPIDR-209ENST00000519141 RPLP0P05388 317 aaKnown RBP11.68□□□□□ -0.54
SPIDR-209ENST00000519141 UMPSP11172 480 aa11.68□□□□□ -0.54
SPIDR-209ENST00000519141 MPIP34949 423 aa11.68□□□□□ -0.54
SPIDR-209ENST00000519141 FEN1P39748 380 aaKnown RBP11.68□□□□□ -0.54
SPIDR-209ENST00000519141 MVDP53602 400 aa11.68□□□□□ -0.54
SPIDR-209ENST00000519141 FAM53BQ14153 422 aa11.68□□□□□ -0.54
SPIDR-209ENST00000519141 KCNAB1Q14722 419 aa11.68□□□□□ -0.54
SPIDR-209ENST00000519141 GRM7Q14831 915 aa11.68□□□□□ -0.54
SPIDR-209ENST00000519141 IRAK1BP1Q5VVH5 260 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms