RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 CD97P48960 835 aa20.54■□□□□ 0.88
VEGFA-217ENST00000518538 SLC18A1P54219 525 aa20.54■□□□□ 0.88
VEGFA-217ENST00000518538 TAS2R50P59544 299 aa20.54■□□□□ 0.88
VEGFA-217ENST00000518538 RAE1P78406 368 aaKnown RBP20.54■□□□□ 0.88
VEGFA-217ENST00000518538 CHI3L2Q15782 390 aa20.54■□□□□ 0.88
VEGFA-217ENST00000518538 NADK2Q4G0N4 442 aa20.54■□□□□ 0.88
VEGFA-217ENST00000518538 SPDYAQ5MJ70 313 aa20.54■□□□□ 0.88
VEGFA-217ENST00000518538 AGBL2Q5U5Z8 902 aa20.54■□□□□ 0.88
VEGFA-217ENST00000518538 B3GNTL1Q67FW5 361 aaPredicted RBP20.54■□□□□ 0.88
VEGFA-217ENST00000518538 GALNT18Q6P9A2 607 aa20.54■□□□□ 0.88
VEGFA-217ENST00000518538 LINC00696Q6ZRV3 163 aa20.54■□□□□ 0.88
VEGFA-217ENST00000518538 CLYBLQ8N0X4 340 aa20.54■□□□□ 0.88
VEGFA-217ENST00000518538 ANKRD42Q8N9B4 389 aa20.54■□□□□ 0.88
VEGFA-217ENST00000518538 DNAJB14Q8TBM8 379 aa20.54■□□□□ 0.88
VEGFA-217ENST00000518538 DAZLQ92904 295 aaKnown RBP20.54■□□□□ 0.88
VEGFA-217ENST00000518538 TM4SF18Q96CE8 201 aa20.54■□□□□ 0.88
VEGFA-217ENST00000518538 TEKT2Q9UIF3 430 aa20.54■□□□□ 0.88
VEGFA-217ENST00000518538 TRAF6Q9Y4K3 522 aa20.54■□□□□ 0.88
VEGFA-217ENST00000518538 CCL27Q9Y4X3 112 aa20.54■□□□□ 0.88
VEGFA-217ENST00000518538 DNAJC15Q9Y5T4 150 aa20.54■□□□□ 0.88
VEGFA-217ENST00000518538 CLCA3PQ9Y6N3 262 aa20.54■□□□□ 0.88
VEGFA-217ENST00000518538 BOD1L1Q8NFC6 3051 aa20.53■□□□□ 0.88
VEGFA-217ENST00000518538 NPIPB8E9PQR5 432 aa20.53■□□□□ 0.88
VEGFA-217ENST00000518538 SLC28A1O00337 649 aa20.53■□□□□ 0.88
VEGFA-217ENST00000518538 GPR75O95800 540 aa20.53■□□□□ 0.88
VEGFA-217ENST00000518538 TIA1P31483 386 aaKnown RBP eCLIP20.53■□□□□ 0.889e-14■■■□□ 15.1
VEGFA-217ENST00000518538 STT3AP46977 705 aa20.53■□□□□ 0.88
VEGFA-217ENST00000518538 PLIN5Q00G26 463 aa20.53■□□□□ 0.88
VEGFA-217ENST00000518538 BTKQ06187 659 aa20.53■□□□□ 0.88
VEGFA-217ENST00000518538 SH2D4BQ5SQS7 431 aa20.53■□□□□ 0.88
VEGFA-217ENST00000518538 ABHD17BQ5VST6 288 aa20.53■□□□□ 0.88
VEGFA-217ENST00000518538 ATG14Q6ZNE5 492 aa20.53■□□□□ 0.88
VEGFA-217ENST00000518538 KIF2BQ8N4N8 673 aa20.53■□□□□ 0.88
VEGFA-217ENST00000518538 SLC5A8Q8N695 610 aa20.53■□□□□ 0.88
VEGFA-217ENST00000518538 APCDD1LQ8NCL9 501 aa20.53■□□□□ 0.88
VEGFA-217ENST00000518538 OR14A16Q8NHC5 309 aa20.53■□□□□ 0.88
VEGFA-217ENST00000518538 PTPMT1Q8WUK0 201 aaPredicted RBP20.53■□□□□ 0.88
VEGFA-217ENST00000518538 UCN3Q969E3 161 aa20.53■□□□□ 0.88
VEGFA-217ENST00000518538 ZNF354BQ96LW1 612 aa20.53■□□□□ 0.88
VEGFA-217ENST00000518538 DGAT2Q96PD7 388 aa20.53■□□□□ 0.88
VEGFA-217ENST00000518538 PELOQ9BRX2 385 aaKnown RBP20.53■□□□□ 0.88
VEGFA-217ENST00000518538 FAIM2Q9BWQ8 316 aa20.53■□□□□ 0.88
VEGFA-217ENST00000518538 VIPAS39Q9H9C1 493 aa20.53■□□□□ 0.88
VEGFA-217ENST00000518538 PCDHA9Q9Y5H5 950 aa20.53■□□□□ 0.88
VEGFA-217ENST00000518538 TLN1Q9Y490 2541 aaKnown RBP20.52■□□□□ 0.88
VEGFA-217ENST00000518538 GNG14A0A1W2PPG7 69 aa20.52■□□□□ 0.88
VEGFA-217ENST00000518538 C1orf226A1L170 272 aa20.52■□□□□ 0.88
VEGFA-217ENST00000518538 WASHC1A8K0Z3 465 aa20.52■□□□□ 0.88
VEGFA-217ENST00000518538 A8MUI8 341 aa20.52■□□□□ 0.88
VEGFA-217ENST00000518538 TMEM114B3SHH9 223 aa20.52■□□□□ 0.88
VEGFA-217ENST00000518538 TMEM233B4DJY2 109 aa20.52■□□□□ 0.88
VEGFA-217ENST00000518538 PGRMC2O15173 223 aa20.52■□□□□ 0.88
VEGFA-217ENST00000518538 NEFHP12036 1026 aa20.52■□□□□ 0.88
VEGFA-217ENST00000518538 COX7A2P14406 83 aa20.52■□□□□ 0.88
VEGFA-217ENST00000518538 ALOX15P16050 662 aaPredicted RBP20.52■□□□□ 0.88
VEGFA-217ENST00000518538 TNNI3P19429 210 aa20.52■□□□□ 0.88
VEGFA-217ENST00000518538 PRPH2P23942 346 aa20.52■□□□□ 0.88
VEGFA-217ENST00000518538 CASRP41180 1078 aa20.52■□□□□ 0.88
VEGFA-217ENST00000518538 CLCN2P51788 898 aa20.52■□□□□ 0.88
VEGFA-217ENST00000518538 GPR143P51810 404 aa20.52■□□□□ 0.88
VEGFA-217ENST00000518538 UGT3A2Q3SY77 523 aa20.52■□□□□ 0.88
VEGFA-217ENST00000518538 HHATQ5VTY9 493 aa20.52■□□□□ 0.88
VEGFA-217ENST00000518538 CES4AQ5XG92 561 aa20.52■□□□□ 0.88
VEGFA-217ENST00000518538 SLC6A19Q695T7 634 aa20.52■□□□□ 0.88
VEGFA-217ENST00000518538 ST13P4Q8IZP2 240 aaPredicted RBP20.52■□□□□ 0.88
VEGFA-217ENST00000518538 MORN4Q8NDC4 146 aa20.52■□□□□ 0.88
VEGFA-217ENST00000518538 TWIST2Q8WVJ9 160 aa20.52■□□□□ 0.88
VEGFA-217ENST00000518538 PNPLA2Q96AD5 504 aa20.52■□□□□ 0.88
VEGFA-217ENST00000518538 VMP1Q96GC9 406 aa20.52■□□□□ 0.88
VEGFA-217ENST00000518538 RBM18Q96H35 190 aaKnown RBP20.52■□□□□ 0.88
VEGFA-217ENST00000518538 METTL2AQ96IZ6 378 aaKnown RBP20.52■□□□□ 0.88
VEGFA-217ENST00000518538 MFRPQ9BY79 579 aa20.52■□□□□ 0.88
VEGFA-217ENST00000518538 TUBB1Q9H4B7 451 aa20.52■□□□□ 0.88
VEGFA-217ENST00000518538 B3GNT3Q9Y2A9 372 aa20.52■□□□□ 0.88
VEGFA-217ENST00000518538 PTGDR2Q9Y5Y4 395 aa20.52■□□□□ 0.88
VEGFA-217ENST00000518538 KALRNO60229 2985 aa20.51■□□□□ 0.87
VEGFA-217ENST00000518538 C17orf105B2RV13 164 aa20.51■□□□□ 0.87
VEGFA-217ENST00000518538 RGS14O43566 566 aa20.51■□□□□ 0.87
VEGFA-217ENST00000518538 HSPA4LO95757 839 aa20.51■□□□□ 0.87
VEGFA-217ENST00000518538 GRK2P25098 689 aa20.51■□□□□ 0.87
VEGFA-217ENST00000518538 PIK3R1P27986 724 aa20.51■□□□□ 0.87
VEGFA-217ENST00000518538 GSTM5P46439 218 aa20.51■□□□□ 0.87
VEGFA-217ENST00000518538 MEP1AQ16819 746 aa20.51■□□□□ 0.87
VEGFA-217ENST00000518538 COLEC12Q5KU26 742 aa20.51■□□□□ 0.87
VEGFA-217ENST00000518538 ACER2Q5QJU3 275 aa20.51■□□□□ 0.87
VEGFA-217ENST00000518538 FCRLBQ6BAA4 426 aa20.51■□□□□ 0.87
VEGFA-217ENST00000518538 SLC48A1Q6P1K1 146 aa20.51■□□□□ 0.87
VEGFA-217ENST00000518538 PRICKLE2Q7Z3G6 844 aa20.51■□□□□ 0.87
VEGFA-217ENST00000518538 LGI4Q8N135 537 aa20.51■□□□□ 0.87
VEGFA-217ENST00000518538 FAM76AQ8TAV0 307 aa20.51■□□□□ 0.87
VEGFA-217ENST00000518538 AGR3Q8TD06 166 aa20.51■□□□□ 0.87
VEGFA-217ENST00000518538 NCLNQ969V3 563 aa20.51■□□□□ 0.87
VEGFA-217ENST00000518538 ARL8AQ96BM9 186 aa20.51■□□□□ 0.87
VEGFA-217ENST00000518538 PAIP2Q9BPZ3 127 aaKnown RBP20.51■□□□□ 0.87
VEGFA-217ENST00000518538 RNF32Q9H0A6 362 aa20.51■□□□□ 0.87
VEGFA-217ENST00000518538 STMN3Q9NZ72 180 aa20.51■□□□□ 0.87
VEGFA-217ENST00000518538 ZDHHC2Q9UIJ5 367 aa20.51■□□□□ 0.87
VEGFA-217ENST00000518538 SMG1Q96Q15 3661 aaKnown RBP20.5■□□□□ 0.87
VEGFA-217ENST00000518538 TRBV11-1A0A0K0K1C0 115 aa20.5■□□□□ 0.87
VEGFA-217ENST00000518538 DYTNA2CJ06 578 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms