RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 AP1S2P56377 157 aa11.77□□□□□ -0.52
PCM1-203ENST00000517545 TMEM201Q5SNT2 666 aa11.77□□□□□ -0.52
PCM1-203ENST00000517545 TRIQKQ629K1 86 aa11.77□□□□□ -0.52
PCM1-203ENST00000517545 GRHL2Q6ISB3 625 aa11.77□□□□□ -0.52
PCM1-203ENST00000517545 CNIH2Q6PI25 160 aa11.77□□□□□ -0.52
PCM1-203ENST00000517545 AMIGO1Q86WK6 493 aa11.77□□□□□ -0.52
PCM1-203ENST00000517545 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.77□□□□□ -0.52
PCM1-203ENST00000517545 OXR1Q8N573 874 aa11.77□□□□□ -0.52
PCM1-203ENST00000517545 LILRA3Q8N6C8 439 aaPredicted RBP11.77□□□□□ -0.52
PCM1-203ENST00000517545 ZFP41Q8N8Y5 198 aa11.77□□□□□ -0.52
PCM1-203ENST00000517545 C19orf18Q8NEA5 215 aa11.77□□□□□ -0.52
PCM1-203ENST00000517545 OR52I1Q8NGK6 324 aa11.77□□□□□ -0.52
PCM1-203ENST00000517545 REEP4Q9H6H4 257 aa11.77□□□□□ -0.52
PCM1-203ENST00000517545 ANKRA2Q9H9E1 313 aa11.77□□□□□ -0.52
PCM1-203ENST00000517545 KCND3Q9UK17 655 aa11.77□□□□□ -0.52
PCM1-203ENST00000517545 CLEC4EQ9ULY5 219 aa11.77□□□□□ -0.52
PCM1-203ENST00000517545 PCDHB7Q9Y5E2 793 aa11.77□□□□□ -0.52
PCM1-203ENST00000517545 HPGDSO60760 199 aa11.77□□□□□ -0.53
PCM1-203ENST00000517545 CELF2O95319 508 aaKnown RBP11.77□□□□□ -0.53
PCM1-203ENST00000517545 ASGR1P07306 291 aa11.77□□□□□ -0.53
PCM1-203ENST00000517545 FAM157BP0CG42 384 aa11.77□□□□□ -0.53
PCM1-203ENST00000517545 PKLRP30613 574 aa11.77□□□□□ -0.53
PCM1-203ENST00000517545 CSNK1DP48730 415 aa11.77□□□□□ -0.53
PCM1-203ENST00000517545 BNC1Q01954 994 aa11.77□□□□□ -0.53
PCM1-203ENST00000517545 TARDBPQ13148 414 aaKnown RBP eCLIP11.77□□□□□ -0.53
PCM1-203ENST00000517545 ILKQ13418 452 aa11.77□□□□□ -0.53
PCM1-203ENST00000517545 C12orf73Q69YU5 71 aa11.77□□□□□ -0.53
PCM1-203ENST00000517545 TRIM40Q6P9F5 258 aa11.77□□□□□ -0.53
PCM1-203ENST00000517545 GOT1L1Q8NHS2 421 aaPredicted RBP11.77□□□□□ -0.53
PCM1-203ENST00000517545 DHRS9Q9BPW9 319 aa11.77□□□□□ -0.53
PCM1-203ENST00000517545 BHLHE41Q9C0J9 482 aaPredicted RBP11.77□□□□□ -0.53
PCM1-203ENST00000517545 LINC00597Q9H2U6 94 aa11.77□□□□□ -0.53
PCM1-203ENST00000517545 NARFLQ9H6Q4 476 aa11.77□□□□□ -0.53
PCM1-203ENST00000517545 NIPAL2Q9H841 368 aa11.77□□□□□ -0.53
PCM1-203ENST00000517545 TRIM45Q9H8W5 580 aaPredicted RBP11.77□□□□□ -0.53
PCM1-203ENST00000517545 ATP13A2Q9NQ11 1180 aa11.77□□□□□ -0.53
PCM1-203ENST00000517545 RBFOX1Q9NWB1 397 aaKnown RBP11.77□□□□□ -0.53
PCM1-203ENST00000517545 KLHL42Q9P2K6 505 aa11.77□□□□□ -0.53
PCM1-203ENST00000517545 LAMA2P24043 3122 aaKnown RBP11.77□□□□□ -0.53
PCM1-203ENST00000517545 FAM240BA0A1B0GVZ2 78 aa11.77□□□□□ -0.53
PCM1-203ENST00000517545 OR2AG2A6NM03 316 aa11.77□□□□□ -0.53
PCM1-203ENST00000517545 UGDHO60701 494 aa11.77□□□□□ -0.53
PCM1-203ENST00000517545 NOS1APO75052 506 aaPredicted RBP11.77□□□□□ -0.53
PCM1-203ENST00000517545 NCR1O76036 304 aa11.77□□□□□ -0.53
PCM1-203ENST00000517545 ADAP00813 363 aa11.77□□□□□ -0.53
PCM1-203ENST00000517545 MYCP01106 439 aaPredicted RBP11.77□□□□□ -0.53
PCM1-203ENST00000517545 MPC1LP0DKB6 136 aa11.77□□□□□ -0.53
PCM1-203ENST00000517545 ARAFP10398 606 aa11.77□□□□□ -0.53
PCM1-203ENST00000517545 GSTM5P46439 218 aa11.77□□□□□ -0.53
PCM1-203ENST00000517545 LSM11P83369 360 aaKnown RBP eCLIP11.77□□□□□ -0.53
PCM1-203ENST00000517545 HEPACAMQ14CZ8 416 aa11.77□□□□□ -0.53
PCM1-203ENST00000517545 WSCD2Q2TBF2 565 aa11.77□□□□□ -0.53
PCM1-203ENST00000517545 CRTC2Q53ET0 693 aaPredicted RBP11.77□□□□□ -0.53
PCM1-203ENST00000517545 TIGD3Q6B0B8 471 aa11.77□□□□□ -0.53
PCM1-203ENST00000517545 AGTRAPQ6RW13 159 aa11.77□□□□□ -0.53
PCM1-203ENST00000517545 HSDL2Q6YN16 418 aa11.77□□□□□ -0.53
PCM1-203ENST00000517545 DCAF4L2Q8NA75 395 aa11.77□□□□□ -0.53
PCM1-203ENST00000517545 TMEM145Q8NBT3 493 aa11.77□□□□□ -0.53
PCM1-203ENST00000517545 WDR48Q8TAF3 677 aa11.77□□□□□ -0.53
PCM1-203ENST00000517545 CLP1Q92989 425 aaKnown RBP11.77□□□□□ -0.53
PCM1-203ENST00000517545 VOPP1Q96AW1 172 aa11.77□□□□□ -0.53
PCM1-203ENST00000517545 KCTD7Q96MP8 289 aa11.77□□□□□ -0.53
PCM1-203ENST00000517545 SLC22A12Q96S37 553 aa11.77□□□□□ -0.53
PCM1-203ENST00000517545 KLF16Q9BXK1 252 aaPredicted RBP11.77□□□□□ -0.53
PCM1-203ENST00000517545 IGLV3-16A0A075B6K0 115 aa11.76□□□□□ -0.53
PCM1-203ENST00000517545 WASHC1A8K0Z3 465 aa11.76□□□□□ -0.53
PCM1-203ENST00000517545 LEUTXA8MZ59 168 aa11.76□□□□□ -0.53
PCM1-203ENST00000517545 SCO1O75880 301 aa11.76□□□□□ -0.53
PCM1-203ENST00000517545 EOMESO95936 686 aa11.76□□□□□ -0.53
PCM1-203ENST00000517545 ATP1B2P14415 290 aaPredicted RBP11.76□□□□□ -0.53
PCM1-203ENST00000517545 CPEP16870 476 aa11.76□□□□□ -0.53
PCM1-203ENST00000517545 HMGA1P17096 107 aaKnown RBP11.76□□□□□ -0.53
PCM1-203ENST00000517545 ELAVL4P26378 380 aaKnown RBP11.76□□□□□ -0.53
PCM1-203ENST00000517545 BDKRB1P46663 353 aa11.76□□□□□ -0.53
PCM1-203ENST00000517545 STK19P49842 368 aaPredicted RBP11.76□□□□□ -0.53
PCM1-203ENST00000517545 SP140Q13342 867 aa11.76□□□□□ -0.53
PCM1-203ENST00000517545 MBTPS1Q14703 1052 aa11.76□□□□□ -0.53
PCM1-203ENST00000517545 ZNF630Q2M218 657 aaPredicted RBP11.76□□□□□ -0.53
PCM1-203ENST00000517545 SDE2Q6IQ49 451 aa11.76□□□□□ -0.53
PCM1-203ENST00000517545 FUT10Q6P4F1 479 aa11.76□□□□□ -0.53
PCM1-203ENST00000517545 ZNF730Q6ZMV8 503 aa11.76□□□□□ -0.53
PCM1-203ENST00000517545 COMMD6Q7Z4G1 85 aa11.76□□□□□ -0.53
PCM1-203ENST00000517545 GPR32P1Q8NGA4 272 aa11.76□□□□□ -0.53
PCM1-203ENST00000517545 OR8J1Q8NGP2 316 aa11.76□□□□□ -0.53
PCM1-203ENST00000517545 GATAD2BQ8WXI9 593 aa11.76□□□□□ -0.53
PCM1-203ENST00000517545 DCLRE1CQ96SD1 692 aaKnown RBP11.76□□□□□ -0.53
PCM1-203ENST00000517545 POLR2J3Q9H1A7 115 aaKnown RBP11.76□□□□□ -0.53
PCM1-203ENST00000517545 PPP1R3EQ9H7J1 279 aa11.76□□□□□ -0.53
PCM1-203ENST00000517545 ATP6V1HQ9UI12 483 aa11.76□□□□□ -0.53
PCM1-203ENST00000517545 HCN2Q9UL51 889 aa11.76□□□□□ -0.53
PCM1-203ENST00000517545 ANGPT4Q9Y264 503 aa11.76□□□□□ -0.53
PCM1-203ENST00000517545 HELZP42694 1942 aaKnown RBP11.76□□□□□ -0.53
PCM1-203ENST00000517545 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.76□□□□□ -0.53
PCM1-203ENST00000517545 ARRDC5A6NEK1 342 aa11.76□□□□□ -0.53
PCM1-203ENST00000517545 LYRM1O43325 122 aa11.76□□□□□ -0.53
PCM1-203ENST00000517545 PLOD3O60568 738 aa11.76□□□□□ -0.53
PCM1-203ENST00000517545 PDE9AO76083 593 aa11.76□□□□□ -0.53
PCM1-203ENST00000517545 SLC16A8O95907 504 aa11.76□□□□□ -0.53
PCM1-203ENST00000517545 IFNA14P01570 189 aa11.76□□□□□ -0.53
PCM1-203ENST00000517545 FURINP09958 794 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms