RNA–Protein interactions for RNA: ENST00000516942.1

RNU6-143P-201, Transcript of RNA, U6 small nuclear 143, pseudogene, humanhuman

BASIC

Gene RNU6-143P, Length 93 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-143P-201ENST00000516942 ALKBH3Q96Q83 286 aaPredicted RBP2.55□□□□□ -2
RNU6-143P-201ENST00000516942 DCTN5Q9BTE1 182 aa2.55□□□□□ -2
RNU6-143P-201ENST00000516942 NMNAT2Q9BZQ4 307 aa2.55□□□□□ -2
RNU6-143P-201ENST00000516942 HOMER3Q9NSC5 361 aa2.55□□□□□ -2
RNU6-143P-201ENST00000516942 INTS10Q9NVR2 710 aaKnown RBP2.55□□□□□ -2
RNU6-143P-201ENST00000516942 BARHL2Q9NY43 387 aa2.55□□□□□ -2
RNU6-143P-201ENST00000516942 VPS54Q9P1Q0 977 aa2.55□□□□□ -2
RNU6-143P-201ENST00000516942 KLHL8Q9P2G9 620 aaPredicted RBP2.55□□□□□ -2
RNU6-143P-201ENST00000516942 LHX3Q9UBR4 397 aa2.55□□□□□ -2
RNU6-143P-201ENST00000516942 KLK11Q9UBX7 282 aa2.55□□□□□ -2
RNU6-143P-201ENST00000516942 CACNG5Q9UF02 275 aa2.55□□□□□ -2
RNU6-143P-201ENST00000516942 LNPEPQ9UIQ6 1025 aa2.55□□□□□ -2
RNU6-143P-201ENST00000516942 HOOK1Q9UJC3 728 aaKnown RBP2.55□□□□□ -2
RNU6-143P-201ENST00000516942 RNF215Q9Y6U7 377 aa2.55□□□□□ -2
RNU6-143P-201ENST00000516942 OR5H15A6NDH6 313 aa2.54□□□□□ -2
RNU6-143P-201ENST00000516942 ZNF724A8MTY0 619 aa2.54□□□□□ -2
RNU6-143P-201ENST00000516942 EPM2AB3EWF7 344 aa2.54□□□□□ -2
RNU6-143P-201ENST00000516942 TCP10L2B9ZVM9 353 aa2.54□□□□□ -2
RNU6-143P-201ENST00000516942 K7EQG2 157 aa2.54□□□□□ -2
RNU6-143P-201ENST00000516942 EEF2KO00418 725 aaKnown RBP2.54□□□□□ -2
RNU6-143P-201ENST00000516942 SMPD2O60906 423 aa2.54□□□□□ -2
RNU6-143P-201ENST00000516942 HSF2BPO75031 334 aa2.54□□□□□ -2
RNU6-143P-201ENST00000516942 OR6A2O95222 327 aa2.54□□□□□ -2
RNU6-143P-201ENST00000516942 HPRP00739 348 aa2.54□□□□□ -2
RNU6-143P-201ENST00000516942 IGHG1P01857 330 aa2.54□□□□□ -2
RNU6-143P-201ENST00000516942 FCER2P06734 321 aa2.54□□□□□ -2
RNU6-143P-201ENST00000516942 HIST1H2AGP0C0S8 130 aaPredicted RBP2.54□□□□□ -2
RNU6-143P-201ENST00000516942 GP9P14770 177 aa2.54□□□□□ -2
RNU6-143P-201ENST00000516942 PRDX6P30041 224 aa2.54□□□□□ -2
RNU6-143P-201ENST00000516942 TSFMP43897 325 aaKnown RBP2.54□□□□□ -2
RNU6-143P-201ENST00000516942 MTIF2P46199 727 aaKnown RBP2.54□□□□□ -2
RNU6-143P-201ENST00000516942 PGFP49763 221 aa2.54□□□□□ -2
RNU6-143P-201ENST00000516942 KCNK10P57789 538 aa2.54□□□□□ -2
RNU6-143P-201ENST00000516942 NLRP11P59045 1033 aaKnown RBP2.54□□□□□ -2
RNU6-143P-201ENST00000516942 NAAAQ02083 359 aa2.54□□□□□ -2
RNU6-143P-201ENST00000516942 GABPB1Q06547 395 aaPredicted RBP2.54□□□□□ -2
RNU6-143P-201ENST00000516942 PDZK1IP1Q13113 114 aa2.54□□□□□ -2
RNU6-143P-201ENST00000516942 NFATC2Q13469 925 aa2.54□□□□□ -2
RNU6-143P-201ENST00000516942 KRT31Q15323 416 aa2.54□□□□□ -2
RNU6-143P-201ENST00000516942 CEBPEQ15744 281 aa2.54□□□□□ -2
RNU6-143P-201ENST00000516942 SGSM1Q2NKQ1 1148 aa2.54□□□□□ -2
RNU6-143P-201ENST00000516942 LRIT3Q3SXY7 679 aa2.54□□□□□ -2
RNU6-143P-201ENST00000516942 CCDC40Q4G0X9 1142 aa2.54□□□□□ -2
RNU6-143P-201ENST00000516942 GPAT3Q53EU6 434 aa2.54□□□□□ -2
RNU6-143P-201ENST00000516942 TAF1BQ53T94 588 aaPredicted RBP2.54□□□□□ -2
RNU6-143P-201ENST00000516942 C1orf189Q5VU69 101 aa2.54□□□□□ -2
RNU6-143P-201ENST00000516942 LIPJQ5W064 366 aa2.54□□□□□ -2
RNU6-143P-201ENST00000516942 CES4AQ5XG92 561 aa2.54□□□□□ -2
RNU6-143P-201ENST00000516942 UNC5DQ6UXZ4 953 aa2.54□□□□□ -2
RNU6-143P-201ENST00000516942 KIF6Q6ZMV9 814 aa2.54□□□□□ -2
RNU6-143P-201ENST00000516942 AMZ2Q86W34 360 aa2.54□□□□□ -2
RNU6-143P-201ENST00000516942 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.54□□□□□ -2
RNU6-143P-201ENST00000516942 PARP8Q8N3A8 854 aa2.54□□□□□ -2
RNU6-143P-201ENST00000516942 COLGALT1Q8NBJ5 622 aa2.54□□□□□ -2
RNU6-143P-201ENST00000516942 CCDC197Q8NCU1 140 aa2.54□□□□□ -2
RNU6-143P-201ENST00000516942 ZNRF1Q8ND25 227 aa2.54□□□□□ -2
RNU6-143P-201ENST00000516942 NUP37Q8NFH4 326 aa2.54□□□□□ -2
RNU6-143P-201ENST00000516942 OR9Q2Q8NGE9 314 aa2.54□□□□□ -2
RNU6-143P-201ENST00000516942 OR6F1Q8NGZ6 308 aa2.54□□□□□ -2
RNU6-143P-201ENST00000516942 SSC4DQ8WTU2 575 aa2.54□□□□□ -2
RNU6-143P-201ENST00000516942 U2AF1L4Q8WU68 220 aaKnown RBP2.54□□□□□ -2
RNU6-143P-201ENST00000516942 HIST1H2ACQ93077 130 aa2.54□□□□□ -2
RNU6-143P-201ENST00000516942 NTNG2Q96CW9 530 aa2.54□□□□□ -2
RNU6-143P-201ENST00000516942 FBXO17Q96EF6 278 aa2.54□□□□□ -2
RNU6-143P-201ENST00000516942 ZNF274Q96GC6 653 aaPredicted RBP2.54□□□□□ -2
RNU6-143P-201ENST00000516942 RPGRIP1Q96KN7 1286 aa2.54□□□□□ -2
RNU6-143P-201ENST00000516942 NSMCE3Q96MG7 304 aa2.54□□□□□ -2
RNU6-143P-201ENST00000516942 ACCSQ96QU6 501 aa2.54□□□□□ -2
RNU6-143P-201ENST00000516942 FUNDC2Q9BWH2 189 aa2.54□□□□□ -2
RNU6-143P-201ENST00000516942 RAB11FIP5Q9BXF6 653 aa2.54□□□□□ -2
RNU6-143P-201ENST00000516942 KRTAP9-8Q9BYQ0 159 aa2.54□□□□□ -2
RNU6-143P-201ENST00000516942 HPS4Q9NQG7 708 aa2.54□□□□□ -2
RNU6-143P-201ENST00000516942 MED17Q9NVC6 651 aa2.54□□□□□ -2
RNU6-143P-201ENST00000516942 MDFICQ9P1T7 246 aa2.54□□□□□ -2
RNU6-143P-201ENST00000516942 IL20RAQ9UHF4 553 aa2.54□□□□□ -2
RNU6-143P-201ENST00000516942 RNF115Q9Y4L5 304 aa2.54□□□□□ -2
RNU6-143P-201ENST00000516942 SYNJ2O15056 1496 aa2.53□□□□□ -2
RNU6-143P-201ENST00000516942 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.53□□□□□ -2
RNU6-143P-201ENST00000516942 PRR23D1E9PI22 279 aaPredicted RBP2.53□□□□□ -2
RNU6-143P-201ENST00000516942 E9PMD0 336 aa2.53□□□□□ -2
RNU6-143P-201ENST00000516942 SGK494L7N484 410 aa2.53□□□□□ -2
RNU6-143P-201ENST00000516942 TRAFD1O14545 582 aaPredicted RBP2.53□□□□□ -2
RNU6-143P-201ENST00000516942 KRT86O43790 486 aa2.53□□□□□ -2
RNU6-143P-201ENST00000516942 EDIL3O43854 480 aa2.53□□□□□ -2
RNU6-143P-201ENST00000516942 KIAA0513O60268 411 aa2.53□□□□□ -2
RNU6-143P-201ENST00000516942 SNAP91O60641 907 aa2.53□□□□□ -2
RNU6-143P-201ENST00000516942 MAGEC1O60732 1142 aa2.53□□□□□ -2
RNU6-143P-201ENST00000516942 CSO75390 466 aaKnown RBP2.53□□□□□ -2
RNU6-143P-201ENST00000516942 FRAT2O75474 233 aaPredicted RBP2.53□□□□□ -2
RNU6-143P-201ENST00000516942 GMNNO75496 209 aa2.53□□□□□ -2
RNU6-143P-201ENST00000516942 TOXO94900 526 aa2.53□□□□□ -2
RNU6-143P-201ENST00000516942 SYNGR4O95473 234 aa2.53□□□□□ -2
RNU6-143P-201ENST00000516942 APBB3O95704 486 aa2.53□□□□□ -2
RNU6-143P-201ENST00000516942 CCDC159P0C7I6 412 aa2.53□□□□□ -2
RNU6-143P-201ENST00000516942 TPBGLP0DKB5 382 aa2.53□□□□□ -2
RNU6-143P-201ENST00000516942 PRR23D2P0DMB1 279 aaPredicted RBP2.53□□□□□ -2
RNU6-143P-201ENST00000516942 ARF4P18085 180 aaPredicted RBP2.53□□□□□ -2
RNU6-143P-201ENST00000516942 PRKACGP22612 351 aa2.53□□□□□ -2
RNU6-143P-201ENST00000516942 IL4RP24394 825 aa2.53□□□□□ -2
RNU6-143P-201ENST00000516942 CHRNA3P32297 505 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms