RNA–Protein interactions for RNA: ENST00000516146.1

RNU6-27P-201, Transcript of RNA, U6 small nuclear 27, pseudogene, humanhuman

BASIC

Gene RNU6-27P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-27P-201ENST00000516146 ADPRMQ3LIE5 342 aa3.32□□□□□ -1.88
RNU6-27P-201ENST00000516146 POM121L1PQ3SYA9 428 aa3.32□□□□□ -1.88
RNU6-27P-201ENST00000516146 USH1GQ495M9 461 aa3.32□□□□□ -1.88
RNU6-27P-201ENST00000516146 GTDC1Q4AE62 458 aa3.32□□□□□ -1.88
RNU6-27P-201ENST00000516146 RFTN2Q52LD8 501 aaPredicted RBP3.32□□□□□ -1.88
RNU6-27P-201ENST00000516146 ZNF790Q6PG37 636 aa3.32□□□□□ -1.88
RNU6-27P-201ENST00000516146 SPSB3Q6PJ21 355 aa3.32□□□□□ -1.88
RNU6-27P-201ENST00000516146 GDPD4Q6W3E5 623 aa3.32□□□□□ -1.88
RNU6-27P-201ENST00000516146 RBMS3Q6XE24 437 aaKnown RBP3.32□□□□□ -1.88
RNU6-27P-201ENST00000516146 GOLGA7Q7Z5G4 137 aa3.32□□□□□ -1.88
RNU6-27P-201ENST00000516146 CUZD1Q86UP6 607 aa3.32□□□□□ -1.88
RNU6-27P-201ENST00000516146 PARP8Q8N3A8 854 aa3.32□□□□□ -1.88
RNU6-27P-201ENST00000516146 STPG4Q8N801 248 aa3.32□□□□□ -1.88
RNU6-27P-201ENST00000516146 OR52M1Q8NGK5 317 aa3.32□□□□□ -1.88
RNU6-27P-201ENST00000516146 CD99L2Q8TCZ2 262 aa3.32□□□□□ -1.88
RNU6-27P-201ENST00000516146 GPR148Q8TDV2 347 aa3.32□□□□□ -1.88
RNU6-27P-201ENST00000516146 NUDCD2Q8WVJ2 157 aa3.32□□□□□ -1.88
RNU6-27P-201ENST00000516146 SENP5Q96HI0 755 aaPredicted RBP3.32□□□□□ -1.88
RNU6-27P-201ENST00000516146 DEFB118Q96PH6 123 aa3.32□□□□□ -1.88
RNU6-27P-201ENST00000516146 KRT12Q99456 494 aa3.32□□□□□ -1.88
RNU6-27P-201ENST00000516146 MEIS3Q99687 375 aa3.32□□□□□ -1.88
RNU6-27P-201ENST00000516146 NDUFAF3Q9BU61 184 aa3.32□□□□□ -1.88
RNU6-27P-201ENST00000516146 TMEM117Q9H0C3 514 aa3.32□□□□□ -1.88
RNU6-27P-201ENST00000516146 RPAP3Q9H6T3 665 aaPredicted RBP3.32□□□□□ -1.88
RNU6-27P-201ENST00000516146 SIX2Q9NPC8 291 aa3.32□□□□□ -1.88
RNU6-27P-201ENST00000516146 TECRQ9NZ01 308 aaKnown RBP3.32□□□□□ -1.88
RNU6-27P-201ENST00000516146 ATP6V1HQ9UI12 483 aa3.32□□□□□ -1.88
RNU6-27P-201ENST00000516146 PLCL2Q9UPR0 1127 aa3.32□□□□□ -1.88
RNU6-27P-201ENST00000516146 SMC3Q9UQE7 1217 aa3.32□□□□□ -1.88
RNU6-27P-201ENST00000516146 ATG4BQ9Y4P1 393 aa3.32□□□□□ -1.88
RNU6-27P-201ENST00000516146 WIPI2Q9Y4P8 454 aa3.32□□□□□ -1.88
RNU6-27P-201ENST00000516146 ANGPTL3Q9Y5C1 460 aa3.32□□□□□ -1.88
RNU6-27P-201ENST00000516146 COL3A1P02461 1466 aaPredicted RBP3.32□□□□□ -1.88
RNU6-27P-201ENST00000516146 FGD5Q6ZNL6 1462 aa3.32□□□□□ -1.88
RNU6-27P-201ENST00000516146 SPATA31D1Q6ZQQ2 1576 aa3.32□□□□□ -1.88
RNU6-27P-201ENST00000516146 KIAA1210Q9ULL0 1709 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 ZMYM6O95789 1325 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 A8MUI8 341 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 IKBKBO14920 756 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 CFLARO15519 480 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 FGF17O60258 216 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 CSDE1O75534 798 aaKnown RBP3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 SPAG6O75602 509 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 CDC123O75794 336 aaPredicted RBP3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 NDUFA7O95182 113 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 APBB3O95704 486 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 NGFP01138 241 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 CRYAAP02489 173 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 ALPLP05186 524 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 IGKV2-30P06310 120 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 GSTA1P08263 222 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 ZCCHC18P0CG32 403 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 GLRA1P23415 457 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 MARK3P27448 753 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 PTPN6P29350 595 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 NPY2RP49146 381 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 HERVK_113P63132 956 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 ERVK-8P63133 956 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 POU3F1Q03052 451 aaPredicted RBP3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 FUT7Q11130 342 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 CHIT1Q13231 466 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 TEAD2Q15562 447 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 PDK4Q16654 411 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 CCDC142Q17RM4 750 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 KIAA1644Q3SXP7 199 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 SPANXN4Q5MJ08 99 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 SPATA46Q5T0L3 261 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 AWAT2Q6E213 333 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 CENPPQ6IPU0 288 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 SLC25A47Q6Q0C1 308 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 CES3Q6UWW8 571 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 PRSS57Q6UWY2 283 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 Q6ZRG5 221 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 C9orf139Q6ZV77 190 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 SH2D5Q6ZV89 423 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 Q6ZVQ6 151 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 CHMP1BQ7LBR1 199 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 TRPT1Q86TN4 253 aaKnown RBP3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 VASH2Q86V25 355 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 CACUL1Q86Y37 369 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 SAMD14Q8IZD0 417 aaPredicted RBP3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 ZNF843Q8N446 348 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 CNBD1Q8NA66 436 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 OR10G8Q8NGN5 311 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 OR2T34Q8NGX1 318 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 GATAD1Q8WUU5 269 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 PCED1BQ96HM7 432 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 TTC25Q96NG3 672 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 VPS35Q96QK1 796 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 DCTN5Q9BTE1 182 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 ERVK-6Q9BXR3 956 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 MRPL13Q9BYD1 178 aaKnown RBP3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 MAN2C1Q9NTJ4 1040 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 MIOXQ9UGB7 285 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 FOXJ3Q9UPW0 622 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 SCN5AQ14524 2016 aa3.31□□□□□ -1.88
RNU6-27P-201ENST00000516146 CUX2O14529 1486 aa3.3□□□□□ -1.88
RNU6-27P-201ENST00000516146 KDRP35968 1356 aa3.3□□□□□ -1.88
RNU6-27P-201ENST00000516146 SF3B1O75533 1304 aaKnown RBP eCLIP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms