RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 HTR6P50406 440 aa10.69□□□□□ -0.7
VCAN-212ENST00000515397 HLCSP50747 726 aa10.69□□□□□ -0.7
VCAN-212ENST00000515397 NR0B1P51843 470 aaKnown RBP10.69□□□□□ -0.7
VCAN-212ENST00000515397 TDGF1P3P51864 188 aa10.69□□□□□ -0.7
VCAN-212ENST00000515397 GPR85P60893 370 aa10.69□□□□□ -0.7
VCAN-212ENST00000515397 HERVK_113P63132 956 aa10.69□□□□□ -0.7
VCAN-212ENST00000515397 TNFRSF17Q02223 184 aa10.69□□□□□ -0.7
VCAN-212ENST00000515397 CUL3Q13618 768 aa10.69□□□□□ -0.7
VCAN-212ENST00000515397 RNFT1Q5M7Z0 435 aa10.69□□□□□ -0.7
VCAN-212ENST00000515397 FAM180BQ6P0A1 224 aa10.69□□□□□ -0.7
VCAN-212ENST00000515397 METTL2BQ6P1Q9 378 aaKnown RBP10.69□□□□□ -0.7
VCAN-212ENST00000515397 GFRALQ6UXV0 394 aa10.69□□□□□ -0.7
VCAN-212ENST00000515397 SH2D5Q6ZV89 423 aa10.69□□□□□ -0.7
VCAN-212ENST00000515397 C4orf33Q8N1A6 199 aa10.69□□□□□ -0.7
VCAN-212ENST00000515397 TMEM156Q8N614 296 aa10.69□□□□□ -0.7
VCAN-212ENST00000515397 CPSF7Q8N684 471 aaKnown RBP10.69□□□□□ -0.7
VCAN-212ENST00000515397 SLC2A12Q8TD20 617 aa10.69□□□□□ -0.7
VCAN-212ENST00000515397 ADAMTS18Q8TE60 1221 aa10.69□□□□□ -0.7
VCAN-212ENST00000515397 VMP1Q96GC9 406 aa10.69□□□□□ -0.7
VCAN-212ENST00000515397 SENP5Q96HI0 755 aaPredicted RBP10.69□□□□□ -0.7
VCAN-212ENST00000515397 C5orf34Q96MH7 638 aa10.69□□□□□ -0.7
VCAN-212ENST00000515397 DGAT2Q96PD7 388 aa10.69□□□□□ -0.7
VCAN-212ENST00000515397 PSMG3-AS1Q96PY0 264 aa10.69□□□□□ -0.7
VCAN-212ENST00000515397 KCNA7Q96RP8 456 aa10.69□□□□□ -0.7
VCAN-212ENST00000515397 SERPINI1Q99574 410 aa10.69□□□□□ -0.7
VCAN-212ENST00000515397 SLX1AQ9BQ83 275 aa10.69□□□□□ -0.7
VCAN-212ENST00000515397 ERVK-6Q9BXR3 956 aa10.69□□□□□ -0.7
VCAN-212ENST00000515397 DDX31Q9H8H2 851 aaKnown RBP10.69□□□□□ -0.7
VCAN-212ENST00000515397 SH3BGRL2Q9UJC5 107 aa10.69□□□□□ -0.7
VCAN-212ENST00000515397 TSC22D4Q9Y3Q8 395 aa10.69□□□□□ -0.7
VCAN-212ENST00000515397 TIMM22Q9Y584 194 aa10.69□□□□□ -0.7
VCAN-212ENST00000515397 MYO7BQ6PIF6 2116 aa10.69□□□□□ -0.7
VCAN-212ENST00000515397 CPAMD8Q8IZJ3 1885 aa10.68□□□□□ -0.7
VCAN-212ENST00000515397 NPIPA5E9PKD4 350 aa10.68□□□□□ -0.7
VCAN-212ENST00000515397 G3V2L1 256 aa10.68□□□□□ -0.7
VCAN-212ENST00000515397 MANBAO00462 879 aa10.68□□□□□ -0.7
VCAN-212ENST00000515397 OR6B1O95007 311 aa10.68□□□□□ -0.7
VCAN-212ENST00000515397 GPR75O95800 540 aa10.68□□□□□ -0.7
VCAN-212ENST00000515397 OTCP00480 354 aa10.68□□□□□ -0.7
VCAN-212ENST00000515397 EDN3P14138 238 aa10.68□□□□□ -0.7
VCAN-212ENST00000515397 COL8A1P27658 744 aa10.68□□□□□ -0.7
VCAN-212ENST00000515397 SERPINB3P29508 390 aa10.68□□□□□ -0.7
VCAN-212ENST00000515397 TLX1P31314 330 aaPredicted RBP10.68□□□□□ -0.7
VCAN-212ENST00000515397 STT3AP46977 705 aa10.68□□□□□ -0.7
VCAN-212ENST00000515397 PRKAA2P54646 552 aa10.68□□□□□ -0.7
VCAN-212ENST00000515397 BTKQ06187 659 aa10.68□□□□□ -0.7
VCAN-212ENST00000515397 SERTAD2Q14140 314 aa10.68□□□□□ -0.7
VCAN-212ENST00000515397 ZNF267Q14586 743 aaPredicted RBP10.68□□□□□ -0.7
VCAN-212ENST00000515397 CCNYL2Q5T2Q4 361 aa10.68□□□□□ -0.7
VCAN-212ENST00000515397 C1QL3Q5VWW1 255 aa10.68□□□□□ -0.7
VCAN-212ENST00000515397 IL20RBQ6UXL0 311 aa10.68□□□□□ -0.7
VCAN-212ENST00000515397 HSDL2Q6YN16 418 aa10.68□□□□□ -0.7
VCAN-212ENST00000515397 GPRIN3Q6ZVF9 776 aa10.68□□□□□ -0.7
VCAN-212ENST00000515397 ZCCHC7Q8N3Z6 543 aaKnown RBP10.68□□□□□ -0.7
VCAN-212ENST00000515397 METTL6Q8TCB7 284 aa10.68□□□□□ -0.7
VCAN-212ENST00000515397 ACMSDQ8TDX5 336 aa10.68□□□□□ -0.7
VCAN-212ENST00000515397 ZNF721Q8TF20 911 aa10.68□□□□□ -0.7
VCAN-212ENST00000515397 SSC4DQ8WTU2 575 aa10.68□□□□□ -0.7
VCAN-212ENST00000515397 DAZLQ92904 295 aaKnown RBP10.68□□□□□ -0.7
VCAN-212ENST00000515397 SCMH1Q96GD3 660 aa10.68□□□□□ -0.7
VCAN-212ENST00000515397 RBM18Q96H35 190 aaKnown RBP10.68□□□□□ -0.7
VCAN-212ENST00000515397 CNPPD1Q9BV87 410 aa10.68□□□□□ -0.7
VCAN-212ENST00000515397 C1QTNF3Q9BXJ4 246 aa10.68□□□□□ -0.7
VCAN-212ENST00000515397 SEC14L3Q9UDX4 400 aa10.68□□□□□ -0.7
VCAN-212ENST00000515397 FETUBQ9UGM5 382 aa10.68□□□□□ -0.7
VCAN-212ENST00000515397 DCDC2Q9UHG0 476 aa10.68□□□□□ -0.7
VCAN-212ENST00000515397 PHF11Q9UIL8 331 aa10.68□□□□□ -0.7
VCAN-212ENST00000515397 NPIPA1Q9UND3 350 aa10.68□□□□□ -0.7
VCAN-212ENST00000515397 PPIEQ9UNP9 301 aaKnown RBP10.68□□□□□ -0.7
VCAN-212ENST00000515397 NAV2Q8IVL1 2488 aa10.67□□□□□ -0.7
VCAN-212ENST00000515397 FCHO1O14526 889 aa10.67□□□□□ -0.7
VCAN-212ENST00000515397 UBFD1O14562 309 aaKnown RBP10.67□□□□□ -0.7
VCAN-212ENST00000515397 OR10H2O60403 315 aa10.67□□□□□ -0.7
VCAN-212ENST00000515397 PROCP04070 461 aa10.67□□□□□ -0.7
VCAN-212ENST00000515397 NR2F6P10588 404 aa10.67□□□□□ -0.7
VCAN-212ENST00000515397 MYL2P10916 166 aa10.67□□□□□ -0.7
VCAN-212ENST00000515397 ALOX15P16050 662 aaPredicted RBP10.67□□□□□ -0.7
VCAN-212ENST00000515397 KRT4P19013 534 aa10.67□□□□□ -0.7
VCAN-212ENST00000515397 TNFRSF8P28908 595 aa10.67□□□□□ -0.7
VCAN-212ENST00000515397 TRHRP34981 398 aaPredicted RBP10.67□□□□□ -0.7
VCAN-212ENST00000515397 BUD31P41223 144 aaPredicted RBP10.67□□□□□ -0.7
VCAN-212ENST00000515397 SOX3P41225 446 aa10.67□□□□□ -0.7
VCAN-212ENST00000515397 SSR4P51571 173 aa10.67□□□□□ -0.7
VCAN-212ENST00000515397 HK2P52789 917 aa10.67□□□□□ -0.7
VCAN-212ENST00000515397 NAGLUP54802 743 aa10.67□□□□□ -0.7
VCAN-212ENST00000515397 FOXA1P55317 472 aa10.67□□□□□ -0.7
VCAN-212ENST00000515397 ERVK-8P63133 956 aa10.67□□□□□ -0.7
VCAN-212ENST00000515397 RNF4P78317 190 aa10.67□□□□□ -0.7
VCAN-212ENST00000515397 HSF1Q00613 529 aa10.67□□□□□ -0.7
VCAN-212ENST00000515397 HMGCS1Q01581 520 aa10.67□□□□□ -0.7
VCAN-212ENST00000515397 GALNT1Q10472 559 aaPredicted RBP10.67□□□□□ -0.7
VCAN-212ENST00000515397 TBL3Q12788 808 aaKnown RBP10.67□□□□□ -0.7
VCAN-212ENST00000515397 ASPHQ12797 758 aa10.67□□□□□ -0.7
VCAN-212ENST00000515397 TERF2Q15554 542 aa10.67□□□□□ -0.7
VCAN-212ENST00000515397 TMEM64Q6YI46 380 aa10.67□□□□□ -0.7
VCAN-212ENST00000515397 COMMD6Q7Z4G1 85 aa10.67□□□□□ -0.7
VCAN-212ENST00000515397 FJX1Q86VR8 437 aa10.67□□□□□ -0.7
VCAN-212ENST00000515397 NUDT13Q86X67 352 aa10.67□□□□□ -0.7
VCAN-212ENST00000515397 SULF2Q8IWU5 870 aa10.67□□□□□ -0.7
VCAN-212ENST00000515397 CYP4Z2PQ8N1L4 340 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms