RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 PRPF18Q99633 342 aaKnown RBP19.72■□□□□ 0.75
LSM6-207ENST00000515311 CRB3Q9BUF7 120 aa19.72■□□□□ 0.75
LSM6-207ENST00000515311 EFHD1Q9BUP0 239 aa19.72■□□□□ 0.75
LSM6-207ENST00000515311 CCDC86Q9H6F5 360 aaKnown RBP19.72■□□□□ 0.75
LSM6-207ENST00000515311 SOX17Q9H6I2 414 aaPredicted RBP19.72■□□□□ 0.75
LSM6-207ENST00000515311 GPN2Q9H9Y4 310 aaPredicted RBP19.72■□□□□ 0.75
LSM6-207ENST00000515311 PTRH2Q9Y3E5 179 aaKnown RBP19.72■□□□□ 0.75
LSM6-207ENST00000515311 IGKV3D-11A0A0A0MRZ8 115 aa19.71■□□□□ 0.75
LSM6-207ENST00000515311 MED19A0JLT2 244 aaPredicted RBP19.71■□□□□ 0.75
LSM6-207ENST00000515311 PCDH17O14917 1159 aa19.71■□□□□ 0.75
LSM6-207ENST00000515311 CCDC22O60826 627 aa19.71■□□□□ 0.75
LSM6-207ENST00000515311 SLC22A3O75751 556 aa19.71■□□□□ 0.75
LSM6-207ENST00000515311 GPR75O95800 540 aa19.71■□□□□ 0.75
LSM6-207ENST00000515311 HEXBP07686 556 aa19.71■□□□□ 0.75
LSM6-207ENST00000515311 BTG2P78543 158 aa19.71■□□□□ 0.75
LSM6-207ENST00000515311 IGLV3-21P80748 117 aaPredicted RBP19.71■□□□□ 0.75
LSM6-207ENST00000515311 FOLH1Q04609 750 aa19.71■□□□□ 0.75
LSM6-207ENST00000515311 BIKQ13323 160 aa19.71■□□□□ 0.75
LSM6-207ENST00000515311 TGIF1Q15583 401 aa19.71■□□□□ 0.75
LSM6-207ENST00000515311 UGT8Q16880 541 aa19.71■□□□□ 0.75
LSM6-207ENST00000515311 SHISA6Q6ZSJ9 500 aa19.71■□□□□ 0.75
LSM6-207ENST00000515311 TICAM1Q8IUC6 712 aa19.71■□□□□ 0.75
LSM6-207ENST00000515311 PRSS58Q8IYP2 241 aa19.71■□□□□ 0.75
LSM6-207ENST00000515311 SAMD14Q8IZD0 417 aaPredicted RBP19.71■□□□□ 0.75
LSM6-207ENST00000515311 OR4K14Q8NGD5 310 aa19.71■□□□□ 0.75
LSM6-207ENST00000515311 UCN3Q969E3 161 aa19.71■□□□□ 0.75
LSM6-207ENST00000515311 ANKRD9Q96BM1 317 aaPredicted RBP19.71■□□□□ 0.75
LSM6-207ENST00000515311 KLHL29Q96CT2 875 aa19.71■□□□□ 0.75
LSM6-207ENST00000515311 TEX37Q96LM6 180 aa19.71■□□□□ 0.75
LSM6-207ENST00000515311 TMEM121BQ9BXQ6 578 aaPredicted RBP19.71■□□□□ 0.75
LSM6-207ENST00000515311 CLMPQ9H6B4 373 aa19.71■□□□□ 0.75
LSM6-207ENST00000515311 SAR1AQ9NR31 198 aa19.71■□□□□ 0.75
LSM6-207ENST00000515311 SEMA3GQ9NS98 782 aa19.71■□□□□ 0.75
LSM6-207ENST00000515311 C3orf18Q9UK00 162 aa19.71■□□□□ 0.75
LSM6-207ENST00000515311 UTS2RQ9UKP6 389 aa19.71■□□□□ 0.75
LSM6-207ENST00000515311 FREM2Q5SZK8 3169 aa19.71■□□□□ 0.75
LSM6-207ENST00000515311 GABRR3A8MPY1 467 aa19.7■□□□□ 0.74
LSM6-207ENST00000515311 FGF17O60258 216 aa19.7■□□□□ 0.74
LSM6-207ENST00000515311 IGHEP01854 428 aa19.7■□□□□ 0.74
LSM6-207ENST00000515311 UMODP07911 640 aa19.7■□□□□ 0.74
LSM6-207ENST00000515311 COX7A2P14406 83 aa19.7■□□□□ 0.74
LSM6-207ENST00000515311 MAOAP21397 527 aa19.7■□□□□ 0.74
LSM6-207ENST00000515311 F8A1P23610 371 aa19.7■□□□□ 0.74
LSM6-207ENST00000515311 PIK3R1P27986 724 aa19.7■□□□□ 0.74
LSM6-207ENST00000515311 EFNA3P52797 238 aa19.7■□□□□ 0.74
LSM6-207ENST00000515311 EMP2P54851 167 aa19.7■□□□□ 0.74
LSM6-207ENST00000515311 NME5P56597 212 aa19.7■□□□□ 0.74
LSM6-207ENST00000515311 SERTAD2Q14140 314 aa19.7■□□□□ 0.74
LSM6-207ENST00000515311 CCDC197Q8NCU1 140 aa19.7■□□□□ 0.74
LSM6-207ENST00000515311 COQ8BQ96D53 544 aa19.7■□□□□ 0.74
LSM6-207ENST00000515311 PTCHD1Q96NR3 888 aa19.7■□□□□ 0.74
LSM6-207ENST00000515311 DPH1Q9BZG8 443 aa19.7■□□□□ 0.74
LSM6-207ENST00000515311 SLC35C2Q9NQQ7 365 aa19.7■□□□□ 0.74
LSM6-207ENST00000515311 ATAD3AQ9NVI7 634 aa19.7■□□□□ 0.74
LSM6-207ENST00000515311 CLDN16Q9Y5I7 305 aa19.7■□□□□ 0.74
LSM6-207ENST00000515311 ZNF780BQ9Y6R6 833 aa19.7■□□□□ 0.74
LSM6-207ENST00000515311 TCRBV16S1A1N1A0A5B0 115 aa19.69■□□□□ 0.74
LSM6-207ENST00000515311 OR2W5A6NFC9 320 aa19.69■□□□□ 0.74
LSM6-207ENST00000515311 WASHC1A8K0Z3 465 aa19.69■□□□□ 0.74
LSM6-207ENST00000515311 TGFBR3LH3BV60 316 aa19.69■□□□□ 0.74
LSM6-207ENST00000515311 SLC22A2O15244 555 aa19.69■□□□□ 0.74
LSM6-207ENST00000515311 TLX3O43711 291 aaPredicted RBP19.69■□□□□ 0.74
LSM6-207ENST00000515311 LDB3O75112 727 aa19.69■□□□□ 0.74
LSM6-207ENST00000515311 CAPNS1P04632 268 aa19.69■□□□□ 0.74
LSM6-207ENST00000515311 LIFP15018 202 aa19.69■□□□□ 0.74
LSM6-207ENST00000515311 ADSLP30566 484 aaPredicted RBP19.69■□□□□ 0.74
LSM6-207ENST00000515311 FOXL2P58012 376 aa19.69■□□□□ 0.74
LSM6-207ENST00000515311 SRSF11Q05519 484 aaKnown RBP19.69■□□□□ 0.74
LSM6-207ENST00000515311 STX4Q12846 297 aa19.69■□□□□ 0.74
LSM6-207ENST00000515311 NSDHLQ15738 373 aa19.69■□□□□ 0.74
LSM6-207ENST00000515311 CEBPEQ15744 281 aa19.69■□□□□ 0.74
LSM6-207ENST00000515311 CPTPQ5TA50 214 aa19.69■□□□□ 0.74
LSM6-207ENST00000515311 NATD1Q8N6N6 113 aa19.69■□□□□ 0.74
LSM6-207ENST00000515311 OR7A2PQ8NGA2 310 aa19.69■□□□□ 0.74
LSM6-207ENST00000515311 OR8J2Q8NGG1 315 aa19.69■□□□□ 0.74
LSM6-207ENST00000515311 KCNE4Q8WWG9 221 aa19.69■□□□□ 0.74
LSM6-207ENST00000515311 METTL21AQ8WXB1 218 aa19.69■□□□□ 0.74
LSM6-207ENST00000515311 EXOSC8Q96B26 276 aaKnown RBP19.69■□□□□ 0.74
LSM6-207ENST00000515311 NACC2Q96BF6 587 aa19.69■□□□□ 0.74
LSM6-207ENST00000515311 BHLHE41Q9C0J9 482 aaPredicted RBP19.69■□□□□ 0.74
LSM6-207ENST00000515311 NMUR2Q9GZQ4 415 aa19.69■□□□□ 0.74
LSM6-207ENST00000515311 NECTIN3Q9NQS3 549 aa19.69■□□□□ 0.74
LSM6-207ENST00000515311 GIMAP4Q9NUV9 329 aa19.69■□□□□ 0.74
LSM6-207ENST00000515311 SH3BP4Q9P0V3 963 aa19.69■□□□□ 0.74
LSM6-207ENST00000515311 C5AR2Q9P296 337 aa19.69■□□□□ 0.74
LSM6-207ENST00000515311 FAM234BA2RU67 622 aa19.68■□□□□ 0.74
LSM6-207ENST00000515311 FCHO1O14526 889 aa19.68■□□□□ 0.74
LSM6-207ENST00000515311 ALOX12BO75342 701 aa19.68■□□□□ 0.74
LSM6-207ENST00000515311 ERAL1O75616 437 aaKnown RBP19.68■□□□□ 0.74
LSM6-207ENST00000515311 DCTN3O75935 186 aa19.68■□□□□ 0.74
LSM6-207ENST00000515311 C8orf89P0DMQ9 161 aa19.68■□□□□ 0.74
LSM6-207ENST00000515311 CSNK2A2P19784 350 aaPredicted RBP19.68■□□□□ 0.74
LSM6-207ENST00000515311 RPS18P62269 152 aaKnown RBP19.68■□□□□ 0.74
LSM6-207ENST00000515311 RCAN2Q14206 197 aa19.68■□□□□ 0.74
LSM6-207ENST00000515311 ANKRD26P1Q6NSI1 321 aa19.68■□□□□ 0.74
LSM6-207ENST00000515311 PAOXQ6QHF9 649 aa19.68■□□□□ 0.74
LSM6-207ENST00000515311 TMEM205Q6UW68 189 aa19.68■□□□□ 0.74
LSM6-207ENST00000515311 MTDHQ86UE4 582 aaKnown RBP19.68■□□□□ 0.74
LSM6-207ENST00000515311 TMEM151BQ8IW70 566 aa19.68■□□□□ 0.74
LSM6-207ENST00000515311 OR9I1Q8NGQ6 314 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms