RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 GPR85P60893 370 aa9.7□□□□□ -0.86
HMGXB3-205ENST00000514469 RNF4P78317 190 aa9.7□□□□□ -0.86
HMGXB3-205ENST00000514469 PLIN5Q00G26 463 aa9.7□□□□□ -0.86
HMGXB3-205ENST00000514469 FOLH1Q04609 750 aa9.7□□□□□ -0.86
HMGXB3-205ENST00000514469 TRAF3Q13114 568 aa9.7□□□□□ -0.86
HMGXB3-205ENST00000514469 CPSF6Q16630 551 aaKnown RBP eCLIP9.7□□□□□ -0.86
HMGXB3-205ENST00000514469 GGTA1PQ4G0N0 100 aa9.7□□□□□ -0.86
HMGXB3-205ENST00000514469 CMPK2Q5EBM0 449 aa9.7□□□□□ -0.86
HMGXB3-205ENST00000514469 C18orf63Q68DL7 685 aa9.7□□□□□ -0.86
HMGXB3-205ENST00000514469 MRGPRGQ86SM5 289 aa9.7□□□□□ -0.86
HMGXB3-205ENST00000514469 GPR180Q86V85 440 aa9.7□□□□□ -0.86
HMGXB3-205ENST00000514469 NUDT13Q86X67 352 aa9.7□□□□□ -0.86
HMGXB3-205ENST00000514469 OR4N5Q8IXE1 308 aa9.7□□□□□ -0.86
HMGXB3-205ENST00000514469 C9orf40Q8IXQ3 194 aa9.7□□□□□ -0.86
HMGXB3-205ENST00000514469 OR52B6Q8NGF0 335 aa9.7□□□□□ -0.86
HMGXB3-205ENST00000514469 ZNF721Q8TF20 911 aa9.7□□□□□ -0.86
HMGXB3-205ENST00000514469 TANKQ92844 425 aa9.7□□□□□ -0.86
HMGXB3-205ENST00000514469 PHF21BQ96EK2 531 aa9.7□□□□□ -0.86
HMGXB3-205ENST00000514469 DGAT2Q96PD7 388 aa9.7□□□□□ -0.86
HMGXB3-205ENST00000514469 RPF2Q9H7B2 306 aaKnown RBP9.7□□□□□ -0.86
HMGXB3-205ENST00000514469 NOL11Q9H8H0 719 aaKnown RBP9.7□□□□□ -0.86
HMGXB3-205ENST00000514469 DDX31Q9H8H2 851 aaKnown RBP9.7□□□□□ -0.86
HMGXB3-205ENST00000514469 PLSCR2Q9NRY7 297 aa9.7□□□□□ -0.86
HMGXB3-205ENST00000514469 LYARQ9NX58 379 aaKnown RBP9.7□□□□□ -0.86
HMGXB3-205ENST00000514469 COPS7AQ9UBW8 275 aa9.7□□□□□ -0.86
HMGXB3-205ENST00000514469 ERVK-11Q9UQG0 969 aa9.7□□□□□ -0.86
HMGXB3-205ENST00000514469 MEMO1Q9Y316 297 aa9.7□□□□□ -0.86
HMGXB3-205ENST00000514469 ATG4BQ9Y4P1 393 aa9.7□□□□□ -0.86
HMGXB3-205ENST00000514469 ASB4Q9Y574 426 aa9.7□□□□□ -0.86
HMGXB3-205ENST00000514469 IKBKGQ9Y6K9 419 aa9.7□□□□□ -0.86
HMGXB3-205ENST00000514469 A0A087WUV0 522 aaPredicted RBP9.69□□□□□ -0.86
HMGXB3-205ENST00000514469 TRIM49D1C9J1S8 452 aa9.69□□□□□ -0.86
HMGXB3-205ENST00000514469 KIF2AO00139 706 aaPredicted RBP9.69□□□□□ -0.86
HMGXB3-205ENST00000514469 ZNHIT1O43257 154 aa9.69□□□□□ -0.86
HMGXB3-205ENST00000514469 PROM1O43490 865 aa9.69□□□□□ -0.86
HMGXB3-205ENST00000514469 TMPRSS11DO60235 418 aa9.69□□□□□ -0.86
HMGXB3-205ENST00000514469 HS6ST1O60243 411 aa9.69□□□□□ -0.86
HMGXB3-205ENST00000514469 ZNF354AO60765 605 aaPredicted RBP9.69□□□□□ -0.86
HMGXB3-205ENST00000514469 SMIM24O75264 130 aa9.69□□□□□ -0.86
HMGXB3-205ENST00000514469 SEMA3DO95025 777 aa9.69□□□□□ -0.86
HMGXB3-205ENST00000514469 RPS17P08708 135 aaKnown RBP9.69□□□□□ -0.86
HMGXB3-205ENST00000514469 ABHD2P08910 425 aa9.69□□□□□ -0.86
HMGXB3-205ENST00000514469 SBK3P0C264 359 aa9.69□□□□□ -0.86
HMGXB3-205ENST00000514469 NR2F6P10588 404 aa9.69□□□□□ -0.86
HMGXB3-205ENST00000514469 ALOX15P16050 662 aaPredicted RBP9.69□□□□□ -0.86
HMGXB3-205ENST00000514469 TNNI3P19429 210 aa9.69□□□□□ -0.86
HMGXB3-205ENST00000514469 GRNP28799 593 aaKnown RBP9.69□□□□□ -0.86
HMGXB3-205ENST00000514469 TLX1P31314 330 aaPredicted RBP9.69□□□□□ -0.86
HMGXB3-205ENST00000514469 NEK2P51955 445 aa9.69□□□□□ -0.86
HMGXB3-205ENST00000514469 CCNG1P51959 295 aa9.69□□□□□ -0.86
HMGXB3-205ENST00000514469 BIKQ13323 160 aa9.69□□□□□ -0.86
HMGXB3-205ENST00000514469 SPRED3Q2MJR0 410 aa9.69□□□□□ -0.86
HMGXB3-205ENST00000514469 C10orf62Q5T681 223 aaPredicted RBP9.69□□□□□ -0.86
HMGXB3-205ENST00000514469 IL20RBQ6UXL0 311 aa9.69□□□□□ -0.86
HMGXB3-205ENST00000514469 DGAT2L6Q6ZPD8 337 aa9.69□□□□□ -0.86
HMGXB3-205ENST00000514469 ST13P4Q8IZP2 240 aaPredicted RBP9.69□□□□□ -0.86
HMGXB3-205ENST00000514469 GOLM1Q8NBJ4 401 aa9.69□□□□□ -0.86
HMGXB3-205ENST00000514469 OR5L2Q8NGL0 311 aa9.69□□□□□ -0.86
HMGXB3-205ENST00000514469 NUBPLQ8TB37 319 aa9.69□□□□□ -0.86
HMGXB3-205ENST00000514469 AGAP11Q8TF27 550 aa9.69□□□□□ -0.86
HMGXB3-205ENST00000514469 PHF10Q8WUB8 498 aaKnown RBP9.69□□□□□ -0.86
HMGXB3-205ENST00000514469 MARVELD3Q96A59 401 aa9.69□□□□□ -0.86
HMGXB3-205ENST00000514469 FBXL20Q96IG2 436 aa9.69□□□□□ -0.86
HMGXB3-205ENST00000514469 NSUN5Q96P11 429 aaKnown RBP9.69□□□□□ -0.86
HMGXB3-205ENST00000514469 CDK15Q96Q40 435 aa9.69□□□□□ -0.86
HMGXB3-205ENST00000514469 PHF12Q96QT6 1004 aa9.69□□□□□ -0.86
HMGXB3-205ENST00000514469 PELOQ9BRX2 385 aaKnown RBP9.69□□□□□ -0.86
HMGXB3-205ENST00000514469 NTMT1Q9BV86 223 aa9.69□□□□□ -0.86
HMGXB3-205ENST00000514469 C1QTNF3Q9BXJ4 246 aa9.69□□□□□ -0.86
HMGXB3-205ENST00000514469 MRPL46Q9H2W6 279 aaKnown RBP9.69□□□□□ -0.86
HMGXB3-205ENST00000514469 ZBTB26Q9HCK0 441 aa9.69□□□□□ -0.86
HMGXB3-205ENST00000514469 A0A0G2JMM0 328 aa9.68□□□□□ -0.86
HMGXB3-205ENST00000514469 A0A1W2PPB8 328 aa9.68□□□□□ -0.86
HMGXB3-205ENST00000514469 A0A1W2PR48 441 aa9.68□□□□□ -0.86
HMGXB3-205ENST00000514469 A0A1W2PRS3 328 aa9.68□□□□□ -0.86
HMGXB3-205ENST00000514469 ARHGAP10A1A4S6 786 aa9.68□□□□□ -0.86
HMGXB3-205ENST00000514469 PINLYPA6NC86 204 aa9.68□□□□□ -0.86
HMGXB3-205ENST00000514469 KIR3DP1A8MWS1 328 aa9.68□□□□□ -0.86
HMGXB3-205ENST00000514469 POC1B-GALNT4F8VUJ3 575 aa9.68□□□□□ -0.86
HMGXB3-205ENST00000514469 HRKO00198 91 aa9.68□□□□□ -0.86
HMGXB3-205ENST00000514469 ADAM10O14672 748 aa9.68□□□□□ -0.86
HMGXB3-205ENST00000514469 HNRNPRO43390 633 aaKnown RBP9.68□□□□□ -0.86
HMGXB3-205ENST00000514469 DYRK3O43781 588 aa9.68□□□□□ -0.86
HMGXB3-205ENST00000514469 GLSO94925 669 aaPredicted RBP9.68□□□□□ -0.86
HMGXB3-205ENST00000514469 NADKO95544 446 aaPredicted RBP9.68□□□□□ -0.86
HMGXB3-205ENST00000514469 AIFM1O95831 613 aa9.68□□□□□ -0.86
HMGXB3-205ENST00000514469 FAM58BPP0C7Q3 252 aa9.68□□□□□ -0.86
HMGXB3-205ENST00000514469 ESRRAP11474 423 aaPredicted RBP9.68□□□□□ -0.86
HMGXB3-205ENST00000514469 GCAP28676 217 aa9.68□□□□□ -0.86
HMGXB3-205ENST00000514469 GALNSP34059 522 aa9.68□□□□□ -0.86
HMGXB3-205ENST00000514469 SMSP52788 366 aa9.68□□□□□ -0.86
HMGXB3-205ENST00000514469 ZNF630Q2M218 657 aaPredicted RBP9.68□□□□□ -0.86
HMGXB3-205ENST00000514469 MPEG1Q2M385 716 aa9.68□□□□□ -0.86
HMGXB3-205ENST00000514469 FRG2Q64ET8 278 aa9.68□□□□□ -0.86
HMGXB3-205ENST00000514469 SP5Q6BEB4 398 aaPredicted RBP9.68□□□□□ -0.86
HMGXB3-205ENST00000514469 XKRXQ6PP77 449 aa9.68□□□□□ -0.86
HMGXB3-205ENST00000514469 CYP20A1Q6UW02 462 aa9.68□□□□□ -0.86
HMGXB3-205ENST00000514469 RTL4Q6ZR62 310 aa9.68□□□□□ -0.86
HMGXB3-205ENST00000514469 NCCRP1Q6ZVX7 275 aaPredicted RBP9.68□□□□□ -0.86
HMGXB3-205ENST00000514469 DOLPP1Q86YN1 238 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms