RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 BCHEP06276 602 aa12.6□□□□□ -0.39
TCOF1-213ENST00000514442 TRAPPC2P0DI81 140 aa12.6□□□□□ -0.39
TCOF1-213ENST00000514442 TRAPPC2BP0DI82 140 aa12.6□□□□□ -0.39
TCOF1-213ENST00000514442 CSNK2A2P19784 350 aaPredicted RBP12.6□□□□□ -0.39
TCOF1-213ENST00000514442 MPIP34949 423 aa12.6□□□□□ -0.39
TCOF1-213ENST00000514442 DSTNP60981 165 aa12.6□□□□□ -0.39
TCOF1-213ENST00000514442 NFE2L1Q14494 772 aa12.6□□□□□ -0.39
TCOF1-213ENST00000514442 FGFBP1Q14512 234 aa12.6□□□□□ -0.39
TCOF1-213ENST00000514442 UGT8Q16880 541 aa12.6□□□□□ -0.39
TCOF1-213ENST00000514442 KANK2Q63ZY3 851 aa12.6□□□□□ -0.39
TCOF1-213ENST00000514442 CREB3L2Q70SY1 520 aa12.6□□□□□ -0.39
TCOF1-213ENST00000514442 H7BY64 318 aa12.59□□□□□ -0.39
TCOF1-213ENST00000514442 HCN1O60741 890 aa12.59□□□□□ -0.39
TCOF1-213ENST00000514442 ADH1BP00325 375 aa12.59□□□□□ -0.39
TCOF1-213ENST00000514442 PCSK2P16519 638 aa12.59□□□□□ -0.39
TCOF1-213ENST00000514442 CRISP3P54108 245 aa12.59□□□□□ -0.39
TCOF1-213ENST00000514442 WDR5P61964 334 aaKnown RBP12.59□□□□□ -0.39
TCOF1-213ENST00000514442 PTGR1Q14914 329 aa12.59□□□□□ -0.39
TCOF1-213ENST00000514442 DUOXA1Q1HG43 343 aa12.59□□□□□ -0.39
TCOF1-213ENST00000514442 HAGHLQ6PII5 290 aaPredicted RBP12.59□□□□□ -0.39
TCOF1-213ENST00000514442 DCUN1D3Q8IWE4 304 aa12.59□□□□□ -0.39
TCOF1-213ENST00000514442 DTWD1Q8N5C7 304 aa12.59□□□□□ -0.39
TCOF1-213ENST00000514442 PIGXQ8TBF5 258 aa12.59□□□□□ -0.39
TCOF1-213ENST00000514442 ZNF354BQ96LW1 612 aa12.59□□□□□ -0.39
TCOF1-213ENST00000514442 PRAP1Q96NZ9 151 aa12.59□□□□□ -0.39
TCOF1-213ENST00000514442 MNTQ99583 582 aa12.59□□□□□ -0.39
TCOF1-213ENST00000514442 OR51E2Q9H255 320 aa12.59□□□□□ -0.39
TCOF1-213ENST00000514442 DDX60LQ5H9U9 1706 aaKnown RBP12.59□□□□□ -0.39
TCOF1-213ENST00000514442 OR5F1O95221 314 aa12.59□□□□□ -0.39
TCOF1-213ENST00000514442 KAT7O95251 611 aa12.59□□□□□ -0.39
TCOF1-213ENST00000514442 FAPQ12884 760 aa12.59□□□□□ -0.39
TCOF1-213ENST00000514442 TARDBPQ13148 414 aaKnown RBP eCLIP12.59□□□□□ -0.39
TCOF1-213ENST00000514442 SP140Q13342 867 aa12.59□□□□□ -0.39
TCOF1-213ENST00000514442 GPR19Q15760 415 aa12.59□□□□□ -0.39
TCOF1-213ENST00000514442 KIAA0319Q5VV43 1072 aa12.59□□□□□ -0.39
TCOF1-213ENST00000514442 ATG9BQ674R7 924 aa12.59□□□□□ -0.39
TCOF1-213ENST00000514442 SLC8B1Q6J4K2 584 aa12.59□□□□□ -0.39
TCOF1-213ENST00000514442 HS3ST5Q8IZT8 346 aa12.59□□□□□ -0.39
TCOF1-213ENST00000514442 IL17FQ96PD4 163 aa12.59□□□□□ -0.39
TCOF1-213ENST00000514442 SDR39U1Q9NRG7 319 aaPredicted RBP12.59□□□□□ -0.39
TCOF1-213ENST00000514442 MTMR10Q9NXD2 777 aa12.59□□□□□ -0.39
TCOF1-213ENST00000514442 APOC3P02656 99 aa12.59□□□□□ -0.39
TCOF1-213ENST00000514442 ALPPP05187 535 aa12.59□□□□□ -0.39
TCOF1-213ENST00000514442 BPIP17213 487 aa12.59□□□□□ -0.39
TCOF1-213ENST00000514442 PRKCAP17252 672 aa12.59□□□□□ -0.39
TCOF1-213ENST00000514442 GPR68Q15743 365 aa12.59□□□□□ -0.39
TCOF1-213ENST00000514442 FAM209AQ5JX71 171 aa12.59□□□□□ -0.39
TCOF1-213ENST00000514442 C6orf136Q5SQH8 315 aa12.59□□□□□ -0.39
TCOF1-213ENST00000514442 PLEKHS1Q5SXH7 462 aa12.59□□□□□ -0.39
TCOF1-213ENST00000514442 ZFAND4Q86XD8 727 aa12.59□□□□□ -0.39
TCOF1-213ENST00000514442 OR6C4Q8NGE1 309 aa12.59□□□□□ -0.39
TCOF1-213ENST00000514442 NXPE2Q96DL1 559 aa12.59□□□□□ -0.39
TCOF1-213ENST00000514442 ZC3H10Q96K80 434 aaKnown RBP12.59□□□□□ -0.39
TCOF1-213ENST00000514442 IL4I1Q96RQ9 567 aa12.59□□□□□ -0.39
TCOF1-213ENST00000514442 S100A13Q99584 98 aa12.59□□□□□ -0.39
TCOF1-213ENST00000514442 PNO1Q9NRX1 252 aaKnown RBP12.59□□□□□ -0.39
TCOF1-213ENST00000514442 DZANK1Q9NVP4 752 aa12.59□□□□□ -0.39
TCOF1-213ENST00000514442 CALML5Q9NZT1 146 aa12.59□□□□□ -0.39
TCOF1-213ENST00000514442 CYP8B1Q9UNU6 501 aa12.59□□□□□ -0.39
TCOF1-213ENST00000514442 PCDHB14Q9Y5E9 798 aa12.59□□□□□ -0.39
TCOF1-213ENST00000514442 CPSF4LA6NMK7 179 aaKnown RBP12.59□□□□□ -0.39
TCOF1-213ENST00000514442 ZNF195O14628 629 aa12.59□□□□□ -0.39
TCOF1-213ENST00000514442 NDUFS1P28331 727 aa12.59□□□□□ -0.39
TCOF1-213ENST00000514442 IGFALSP35858 605 aa12.59□□□□□ -0.39
TCOF1-213ENST00000514442 RANBP3LQ86VV4 465 aaPredicted RBP12.59□□□□□ -0.39
TCOF1-213ENST00000514442 JAZF1Q86VZ6 243 aa12.59□□□□□ -0.39
TCOF1-213ENST00000514442 OR4K1Q8NGD4 311 aa12.59□□□□□ -0.39
TCOF1-213ENST00000514442 NFKBIDQ8NI38 313 aa12.59□□□□□ -0.39
TCOF1-213ENST00000514442 SCRN2Q96FV2 425 aa12.59□□□□□ -0.39
TCOF1-213ENST00000514442 DPYSL5Q9BPU6 564 aa12.59□□□□□ -0.39
TCOF1-213ENST00000514442 FZD3Q9NPG1 666 aa12.59□□□□□ -0.39
TCOF1-213ENST00000514442 STUB1Q9UNE7 303 aa12.59□□□□□ -0.39
TCOF1-213ENST00000514442 A0A1W2PQ09 198 aa12.58□□□□□ -0.39
TCOF1-213ENST00000514442 METTL15A6NJ78 407 aa12.58□□□□□ -0.39
TCOF1-213ENST00000514442 CLCA1A8K7I4 914 aa12.58□□□□□ -0.39
TCOF1-213ENST00000514442 C6orf47O95873 294 aa12.58□□□□□ -0.39
TCOF1-213ENST00000514442 FAUP35544 74 aaKnown RBP12.58□□□□□ -0.39
TCOF1-213ENST00000514442 MLLT3P42568 568 aaPredicted RBP12.58□□□□□ -0.39
TCOF1-213ENST00000514442 BTN1A1Q13410 526 aa12.58□□□□□ -0.39
TCOF1-213ENST00000514442 RANBP10Q6VN20 620 aa12.58□□□□□ -0.39
TCOF1-213ENST00000514442 PAQR9Q6ZVX9 377 aa12.58□□□□□ -0.39
TCOF1-213ENST00000514442 LARP4Q71RC2 724 aaKnown RBP eCLIP12.58□□□□□ -0.39
TCOF1-213ENST00000514442 IQCHQ86VS3 1027 aa12.58□□□□□ -0.39
TCOF1-213ENST00000514442 SLC39A11Q8N1S5 342 aa12.58□□□□□ -0.39
TCOF1-213ENST00000514442 GHDCQ8N2G8 530 aa12.58□□□□□ -0.39
TCOF1-213ENST00000514442 OXR1Q8N573 874 aa12.58□□□□□ -0.39
TCOF1-213ENST00000514442 TRAM1L1Q8N609 369 aa12.58□□□□□ -0.39
TCOF1-213ENST00000514442 LMX1AQ8TE12 382 aa12.58□□□□□ -0.39
TCOF1-213ENST00000514442 CIDECQ96AQ7 238 aaPredicted RBP12.58□□□□□ -0.39
TCOF1-213ENST00000514442 PKP4Q99569 1192 aa12.58□□□□□ -0.39
TCOF1-213ENST00000514442 TVP23BQ9NYZ1 205 aa12.58□□□□□ -0.39
TCOF1-213ENST00000514442 GMPR2Q9P2T1 348 aaKnown RBP12.58□□□□□ -0.39
TCOF1-213ENST00000514442 IKZF2Q9UKS7 526 aa12.58□□□□□ -0.39
TCOF1-213ENST00000514442 MYH9P35579 1960 aaKnown RBP12.58□□□□□ -0.39
TCOF1-213ENST00000514442 TCRBV21S2A2A0A5A6 115 aa12.58□□□□□ -0.4
TCOF1-213ENST00000514442 SLC19A2O60779 497 aa12.58□□□□□ -0.4
TCOF1-213ENST00000514442 FDXRP22570 491 aa12.58□□□□□ -0.4
TCOF1-213ENST00000514442 PAGE3Q5JUK9 113 aa12.58□□□□□ -0.4
TCOF1-213ENST00000514442 MARCH9Q86YJ5 346 aa12.58□□□□□ -0.4
TCOF1-213ENST00000514442 KRTCAP2Q8N6L1 136 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms