RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-222ENST00000514006 BACE1P56817 501 aa4.39□□□□□ -1.71
CALCOCO2-222ENST00000514006 ACTR1AP61163 376 aa4.39□□□□□ -1.71
CALCOCO2-222ENST00000514006 ILF3Q12906 894 aaKnown RBP eCLIP4.39□□□□□ -1.71
CALCOCO2-222ENST00000514006 SNTB2Q13425 540 aaKnown RBP4.39□□□□□ -1.71
CALCOCO2-222ENST00000514006 RFTN1Q14699 578 aaPredicted RBP4.39□□□□□ -1.71
CALCOCO2-222ENST00000514006 ADPRMQ3LIE5 342 aa4.39□□□□□ -1.71
CALCOCO2-222ENST00000514006 ZNF528Q3MIS6 628 aa4.39□□□□□ -1.71
CALCOCO2-222ENST00000514006 KIAA1644Q3SXP7 199 aa4.39□□□□□ -1.71
CALCOCO2-222ENST00000514006 NADK2Q4G0N4 442 aa4.39□□□□□ -1.71
CALCOCO2-222ENST00000514006 CEP55Q53EZ4 464 aa4.39□□□□□ -1.71
CALCOCO2-222ENST00000514006 SPANXN4Q5MJ08 99 aa4.39□□□□□ -1.71
CALCOCO2-222ENST00000514006 ZNF790Q6PG37 636 aa4.39□□□□□ -1.71
CALCOCO2-222ENST00000514006 Q6ZVQ6 151 aa4.39□□□□□ -1.71
CALCOCO2-222ENST00000514006 ERASQ7Z444 233 aa4.39□□□□□ -1.71
CALCOCO2-222ENST00000514006 WDR49Q8IV35 697 aa4.39□□□□□ -1.71
CALCOCO2-222ENST00000514006 CIARTQ8N365 385 aaPredicted RBP4.39□□□□□ -1.71
CALCOCO2-222ENST00000514006 OR4D10Q8NGI6 311 aa4.39□□□□□ -1.71
CALCOCO2-222ENST00000514006 OR10G8Q8NGN5 311 aa4.39□□□□□ -1.71
CALCOCO2-222ENST00000514006 C8orf46Q8TAG6 207 aa4.39□□□□□ -1.71
CALCOCO2-222ENST00000514006 LMO3Q8TAP4 145 aa4.39□□□□□ -1.71
CALCOCO2-222ENST00000514006 GOLGA5Q8TBA6 731 aa4.39□□□□□ -1.71
CALCOCO2-222ENST00000514006 GATAD1Q8WUU5 269 aa4.39□□□□□ -1.71
CALCOCO2-222ENST00000514006 SLC5A11Q8WWX8 675 aa4.39□□□□□ -1.71
CALCOCO2-222ENST00000514006 TMEM37Q8WXS4 190 aa4.39□□□□□ -1.71
CALCOCO2-222ENST00000514006 SHC3Q92529 594 aa4.39□□□□□ -1.71
CALCOCO2-222ENST00000514006 P3H4Q92791 437 aa4.39□□□□□ -1.71
CALCOCO2-222ENST00000514006 C2orf48Q96LS8 159 aa4.39□□□□□ -1.71
CALCOCO2-222ENST00000514006 MEIS3Q99687 375 aa4.39□□□□□ -1.71
CALCOCO2-222ENST00000514006 RAB33BQ9H082 229 aa4.39□□□□□ -1.71
CALCOCO2-222ENST00000514006 FAM124BQ9H5Z6 455 aaPredicted RBP4.39□□□□□ -1.71
CALCOCO2-222ENST00000514006 UBE2TQ9NPD8 197 aaPredicted RBP4.39□□□□□ -1.71
CALCOCO2-222ENST00000514006 KIF7Q2M1P5 1343 aa4.39□□□□□ -1.71
CALCOCO2-222ENST00000514006 SHISA7A6NL88 538 aa4.38□□□□□ -1.71
CALCOCO2-222ENST00000514006 BUB3O43684 328 aa4.38□□□□□ -1.71
CALCOCO2-222ENST00000514006 FGF17O60258 216 aa4.38□□□□□ -1.71
CALCOCO2-222ENST00000514006 PDHBP11177 359 aa4.38□□□□□ -1.71
CALCOCO2-222ENST00000514006 GIFP27352 417 aa4.38□□□□□ -1.71
CALCOCO2-222ENST00000514006 DPP4P27487 766 aa4.38□□□□□ -1.71
CALCOCO2-222ENST00000514006 PPP2R1AP30153 589 aa4.38□□□□□ -1.71
CALCOCO2-222ENST00000514006 FCGR2BP31994 310 aaPredicted RBP4.38□□□□□ -1.71
CALCOCO2-222ENST00000514006 SOX3P41225 446 aa4.38□□□□□ -1.71
CALCOCO2-222ENST00000514006 NPY2RP49146 381 aa4.38□□□□□ -1.71
CALCOCO2-222ENST00000514006 CDKL1Q00532 357 aa4.38□□□□□ -1.71
CALCOCO2-222ENST00000514006 CLPPQ16740 277 aaPredicted RBP4.38□□□□□ -1.71
CALCOCO2-222ENST00000514006 TPD52L1Q16890 204 aaPredicted RBP4.38□□□□□ -1.71
CALCOCO2-222ENST00000514006 SLC36A3Q495N2 470 aa4.38□□□□□ -1.71
CALCOCO2-222ENST00000514006 C1orf189Q5VU69 101 aa4.38□□□□□ -1.71
CALCOCO2-222ENST00000514006 LRRC8BQ6P9F7 803 aa4.38□□□□□ -1.71
CALCOCO2-222ENST00000514006 CES3Q6UWW8 571 aa4.38□□□□□ -1.71
CALCOCO2-222ENST00000514006 Q71RC1 249 aaPredicted RBP4.38□□□□□ -1.71
CALCOCO2-222ENST00000514006 DND1Q8IYX4 353 aaKnown RBP4.38□□□□□ -1.71
CALCOCO2-222ENST00000514006 GCNT2Q8N0V5 402 aa4.38□□□□□ -1.71
CALCOCO2-222ENST00000514006 MLKLQ8NB16 471 aa4.38□□□□□ -1.71
CALCOCO2-222ENST00000514006 STKLD1Q8NE28 680 aa4.38□□□□□ -1.71
CALCOCO2-222ENST00000514006 OR2T34Q8NGX1 318 aa4.38□□□□□ -1.71
CALCOCO2-222ENST00000514006 GIPC3Q8TF64 312 aa4.38□□□□□ -1.71
CALCOCO2-222ENST00000514006 TCP11Q8WWU5 503 aa4.38□□□□□ -1.71
CALCOCO2-222ENST00000514006 MCHR2Q969V1 340 aa4.38□□□□□ -1.71
CALCOCO2-222ENST00000514006 PINX1Q96BK5 328 aaKnown RBP4.38□□□□□ -1.71
CALCOCO2-222ENST00000514006 COG3Q96JB2 828 aa4.38□□□□□ -1.71
CALCOCO2-222ENST00000514006 LYZL4Q96KX0 146 aa4.38□□□□□ -1.71
CALCOCO2-222ENST00000514006 TSPAN18Q96SJ8 248 aa4.38□□□□□ -1.71
CALCOCO2-222ENST00000514006 NDUFAF3Q9BU61 184 aa4.38□□□□□ -1.71
CALCOCO2-222ENST00000514006 WRAP53Q9BUR4 548 aaKnown RBP4.38□□□□□ -1.71
CALCOCO2-222ENST00000514006 PAPOLGQ9BWT3 736 aaKnown RBP4.38□□□□□ -1.71
CALCOCO2-222ENST00000514006 TMEM117Q9H0C3 514 aa4.38□□□□□ -1.71
CALCOCO2-222ENST00000514006 HIPK2Q9H2X6 1198 aa4.38□□□□□ -1.71
CALCOCO2-222ENST00000514006 RMND5AQ9H871 391 aa4.38□□□□□ -1.71
CALCOCO2-222ENST00000514006 COG4Q9H9E3 785 aa4.38□□□□□ -1.71
CALCOCO2-222ENST00000514006 ATAD3AQ9NVI7 634 aa4.38□□□□□ -1.71
CALCOCO2-222ENST00000514006 MIOXQ9UGB7 285 aa4.38□□□□□ -1.71
CALCOCO2-222ENST00000514006 HPCAL4Q9UM19 191 aa4.38□□□□□ -1.71
CALCOCO2-222ENST00000514006 FOXJ3Q9UPW0 622 aa4.38□□□□□ -1.71
CALCOCO2-222ENST00000514006 NEDD4P46934 1319 aa4.38□□□□□ -1.71
CALCOCO2-222ENST00000514006 STK36Q9NRP7 1315 aa4.38□□□□□ -1.71
CALCOCO2-222ENST00000514006 MSGN1A6NI15 193 aa4.37□□□□□ -1.71
CALCOCO2-222ENST00000514006 SMIM1B2RUZ4 78 aa4.37□□□□□ -1.71
CALCOCO2-222ENST00000514006 ANHXE9PGG2 379 aa4.37□□□□□ -1.71
CALCOCO2-222ENST00000514006 SIGLEC5O15389 551 aa4.37□□□□□ -1.71
CALCOCO2-222ENST00000514006 KIAA0513O60268 411 aa4.37□□□□□ -1.71
CALCOCO2-222ENST00000514006 CSDE1O75534 798 aaKnown RBP4.37□□□□□ -1.71
CALCOCO2-222ENST00000514006 ANXA9O76027 345 aa4.37□□□□□ -1.71
CALCOCO2-222ENST00000514006 NADKO95544 446 aaPredicted RBP4.37□□□□□ -1.71
CALCOCO2-222ENST00000514006 OPN1MWP04001 364 aa4.37□□□□□ -1.71
CALCOCO2-222ENST00000514006 TPM2P07951 284 aa4.37□□□□□ -1.71
CALCOCO2-222ENST00000514006 ASNSP08243 561 aa4.37□□□□□ -1.71
CALCOCO2-222ENST00000514006 OPN1MW2P0DN77 364 aa4.37□□□□□ -1.71
CALCOCO2-222ENST00000514006 OPN1MW3P0DN78 364 aa4.37□□□□□ -1.71
CALCOCO2-222ENST00000514006 MBL2P11226 248 aaPredicted RBP4.37□□□□□ -1.71
CALCOCO2-222ENST00000514006 C4BPBP20851 252 aa4.37□□□□□ -1.71
CALCOCO2-222ENST00000514006 PTPN4P29074 926 aa4.37□□□□□ -1.71
CALCOCO2-222ENST00000514006 THBS3P49746 956 aa4.37□□□□□ -1.71
CALCOCO2-222ENST00000514006 FHITP49789 147 aa4.37□□□□□ -1.71
CALCOCO2-222ENST00000514006 XGP55808 180 aa4.37□□□□□ -1.71
CALCOCO2-222ENST00000514006 NANOS2P60321 138 aaKnown RBP4.37□□□□□ -1.71
CALCOCO2-222ENST00000514006 LRRC74AQ0VAA2 488 aa4.37□□□□□ -1.71
CALCOCO2-222ENST00000514006 EFTUD2Q15029 972 aaKnown RBP eCLIP4.37□□□□□ -1.71
CALCOCO2-222ENST00000514006 CCDC6Q16204 474 aa4.37□□□□□ -1.71
CALCOCO2-222ENST00000514006 MAJINQ3KP22 176 aa4.37□□□□□ -1.71
CALCOCO2-222ENST00000514006 LRRC23Q53EV4 343 aaPredicted RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms