RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 AQP9O43315 295 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 B3GALT2O43825 422 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 SRPX2O60687 465 aaPredicted RBP7.91□□□□□ -1.14
RNF4-220ENST00000513578 PDE9AO76083 593 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 SLITRK5O94991 958 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 NTRK1P04629 796 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 ALPLP05186 524 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 FABP3P05413 133 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 TFPTP0C1Z6 253 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 ZNF888P0CJ79 500 aaPredicted RBP7.91□□□□□ -1.14
RNF4-220ENST00000513578 NR2F6P10588 404 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 ZNF23P17027 643 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 ALOX12P18054 663 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 MYF6P23409 242 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 CERS1P27544 350 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 MPIP34949 423 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 SOAT1P35610 550 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 DCTP40126 519 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 BUD31P41223 144 aaPredicted RBP7.91□□□□□ -1.14
RNF4-220ENST00000513578 CCT3P49368 545 aaKnown RBP7.91□□□□□ -1.14
RNF4-220ENST00000513578 CDK9P50750 372 aaKnown RBP7.91□□□□□ -1.14
RNF4-220ENST00000513578 ITGA1P56199 1179 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 RAB8AP61006 207 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 ARF3P61204 181 aaPredicted RBP7.91□□□□□ -1.14
RNF4-220ENST00000513578 BTN3A2P78410 334 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 KCNJ10P78508 379 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 ADARB1P78563 741 aaKnown RBP7.91□□□□□ -1.14
RNF4-220ENST00000513578 PPP2R2BQ00005 443 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 TNFRSF17Q02223 184 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 MERTKQ12866 999 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 RFX4Q33E94 735 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 LRRC23Q53EV4 343 aaPredicted RBP7.91□□□□□ -1.14
RNF4-220ENST00000513578 ZC3H12BQ5HYM0 836 aaKnown RBP7.91□□□□□ -1.14
RNF4-220ENST00000513578 C6orf52Q5T4I8 152 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 PRAMEF8Q5VWM4 474 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 PRAMEF7Q5VXH5 474 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 OR2T5Q6IEZ7 315 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 OR52E8Q6IFG1 317 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 REEP3Q6NUK4 255 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 TMEM214Q6NUQ4 689 aaKnown RBP7.91□□□□□ -1.14
RNF4-220ENST00000513578 TMEM154Q6P9G4 183 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 SHQ1Q6PI26 577 aaKnown RBP7.91□□□□□ -1.14
RNF4-220ENST00000513578 USP53Q70EK8 1073 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 USP51Q70EK9 711 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 ZDHHC13Q8IUH4 622 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 ARMC8Q8IUR7 673 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 CLEC4FQ8N1N0 589 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 DHRSXQ8N5I4 330 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 KCT2Q8NC54 265 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 OR56A1Q8NGH5 318 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 OR2T29Q8NH02 315 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 OR10G6Q8NH81 332 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 SUN3Q8TAQ9 357 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 PNPT1Q8TCS8 783 aaKnown RBP7.91□□□□□ -1.14
RNF4-220ENST00000513578 LMX1AQ8TE12 382 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 KLHL6Q8WZ60 621 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 LZICQ8WZA0 190 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 N4BP2L2Q92802 583 aaPredicted RBP7.91□□□□□ -1.14
RNF4-220ENST00000513578 RERGQ96A58 199 aaPredicted RBP7.91□□□□□ -1.14
RNF4-220ENST00000513578 SDCCAG3Q96C92 435 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 CNRIP1Q96F85 164 aaPredicted RBP7.91□□□□□ -1.14
RNF4-220ENST00000513578 VPS50Q96JG6 964 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 HSH2DQ96JZ2 352 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 HSPA12BQ96MM6 686 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 TRAPPC9Q96Q05 1148 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 BBS4Q96RK4 519 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 CD180Q99467 661 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 MAPKAP1Q9BPZ7 522 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 RBM4BQ9BQ04 359 aaKnown RBP7.91□□□□□ -1.14
RNF4-220ENST00000513578 ADI1Q9BV57 179 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 RBM4Q9BWF3 364 aaKnown RBP7.91□□□□□ -1.14
RNF4-220ENST00000513578 EPB41L1Q9H4G0 881 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 BCL2L10Q9HD36 194 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 THSD1Q9NS62 852 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 UBAP1Q9NZ09 502 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 DAPP1Q9UN19 280 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 ENTPD4Q9Y227 616 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 V9GYQ6 96 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 SPAG17Q6Q759 2223 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 ZDBF2Q9HCK1 2354 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 LOC105369274A0A096LPK9 316 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 A0A0G2JN53 185 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 LOC102723532A0A0G2JNH3 316 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 BLACEA4D250 179 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 TRIM64A6NGJ6 449 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 A8MVJ9 347 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 B4DGG1 531 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 PDLIM1O00151 329 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 PLOD2O00469 737 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 GNGT2O14610 69 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 PGRMC2O15173 223 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 BCAT2O15382 392 aaPredicted RBP7.9□□□□□ -1.14
RNF4-220ENST00000513578 EMC8O43402 210 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 ASNA1O43681 348 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 GALR3O60755 368 aaPredicted RBP7.9□□□□□ -1.14
RNF4-220ENST00000513578 B4GALT2O60909 372 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 PIAS2O75928 621 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 SMNDC1O75940 238 aaKnown RBP eCLIP7.9□□□□□ -1.14
RNF4-220ENST00000513578 UBXN7O94888 489 aa7.9□□□□□ -1.14
RNF4-220ENST00000513578 TNFAIP8O95379 198 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms