RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 CTSL3PQ5NE16 218 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 HP1BP3Q5SSJ5 553 aaPredicted RBP8.35□□□□□ -1.07
NUP54-211ENST00000512151 UBAP2Q5T6F2 1119 aaKnown RBP8.35□□□□□ -1.07
NUP54-211ENST00000512151 AFTPHQ6ULP2 937 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 OTOAQ7RTW8 1153 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 MED12LQ86YW9 2145 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 GSPT2Q8IYD1 628 aaKnown RBP8.35□□□□□ -1.07
NUP54-211ENST00000512151 LRRC25Q8N386 305 aaPredicted RBP8.35□□□□□ -1.07
NUP54-211ENST00000512151 ARIH2OSQ8N7S6 290 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 ZNF321PQ8N8H1 164 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 ZNF441Q8N8Z8 693 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 GOLM1Q8NBJ4 401 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 CAMKVQ8NCB2 501 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 GSDMBQ8TAX9 411 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 MAGEC3Q8TD91 643 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 SLC13A3Q8WWT9 602 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 ANKRD9Q96BM1 317 aaPredicted RBP8.35□□□□□ -1.07
NUP54-211ENST00000512151 FOPNLQ96NB1 174 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 SLC30A3Q99726 388 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 BEX2Q9BXY8 128 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 PRDM14Q9GZV8 571 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 RHBGQ9H310 441 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 PLAC1Q9HBJ0 212 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 ZFP64Q9NPA5 681 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 CHRAC1Q9NRG0 131 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 TMEM184CQ9NVA4 438 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 GALPQ9UBC7 116 aa8.35□□□□□ -1.07
NUP54-211ENST00000512151 NOTCH1P46531 2555 aa8.34□□□□□ -1.07
NUP54-211ENST00000512151 A0A096LNT2 108 aa8.34□□□□□ -1.07
NUP54-211ENST00000512151 A8MXE2 369 aa8.34□□□□□ -1.07
NUP54-211ENST00000512151 E7ESA3 106 aa8.34□□□□□ -1.07
NUP54-211ENST00000512151 PRMT5O14744 637 aaPredicted RBP8.34□□□□□ -1.07
NUP54-211ENST00000512151 PSIP1O75475 530 aaKnown RBP8.34□□□□□ -1.07
NUP54-211ENST00000512151 LRATO95237 230 aa8.34□□□□□ -1.07
NUP54-211ENST00000512151 PLAUP00749 431 aa8.34□□□□□ -1.07
NUP54-211ENST00000512151 FAM153BP0C7A2 387 aa8.34□□□□□ -1.07
NUP54-211ENST00000512151 ADRA1DP25100 572 aa8.34□□□□□ -1.07
NUP54-211ENST00000512151 NMBRP28336 390 aa8.34□□□□□ -1.07
NUP54-211ENST00000512151 ACVR1BP36896 505 aa8.34□□□□□ -1.07
NUP54-211ENST00000512151 VSNL1P62760 191 aa8.34□□□□□ -1.07
NUP54-211ENST00000512151 SARNPP82979 210 aaKnown RBP8.34□□□□□ -1.07
NUP54-211ENST00000512151 CAV1Q03135 178 aa8.34□□□□□ -1.07
NUP54-211ENST00000512151 CALCOCO2Q13137 446 aa8.34□□□□□ -1.07
NUP54-211ENST00000512151 HERC3Q15034 1050 aa8.34□□□□□ -1.07
NUP54-211ENST00000512151 TERF2Q15554 542 aa8.34□□□□□ -1.07
NUP54-211ENST00000512151 BBS9Q3SYG4 887 aa8.34□□□□□ -1.07
NUP54-211ENST00000512151 FAM153CQ494X1 144 aa8.34□□□□□ -1.07
NUP54-211ENST00000512151 GLIPR1L2Q4G1C9 344 aa8.34□□□□□ -1.07
NUP54-211ENST00000512151 ACSBG2Q5FVE4 666 aa8.34□□□□□ -1.07
NUP54-211ENST00000512151 BEND6Q5SZJ8 279 aaPredicted RBP8.34□□□□□ -1.07
NUP54-211ENST00000512151 HECTD2Q5U5R9 776 aa8.34□□□□□ -1.07
NUP54-211ENST00000512151 PRAMEF20Q5VT98 475 aa8.34□□□□□ -1.07
NUP54-211ENST00000512151 PTRHD1Q6GMV3 140 aaKnown RBP8.34□□□□□ -1.07
NUP54-211ENST00000512151 CAPN13Q6MZZ7 669 aaPredicted RBP8.34□□□□□ -1.07
NUP54-211ENST00000512151 CES3Q6UWW8 571 aa8.34□□□□□ -1.07
NUP54-211ENST00000512151 ANKMY2Q8IV38 441 aa8.34□□□□□ -1.07
NUP54-211ENST00000512151 IFT20Q8IY31 132 aa8.34□□□□□ -1.07
NUP54-211ENST00000512151 LIX1Q8N485 282 aa8.34□□□□□ -1.07
NUP54-211ENST00000512151 OR4L1Q8NH43 312 aa8.34□□□□□ -1.07
NUP54-211ENST00000512151 FAM136AQ96C01 138 aa8.34□□□□□ -1.07
NUP54-211ENST00000512151 NTNG2Q96CW9 530 aa8.34□□□□□ -1.07
NUP54-211ENST00000512151 THAP11Q96EK4 314 aa8.34□□□□□ -1.07
NUP54-211ENST00000512151 WDYHV1Q96HA8 205 aa8.34□□□□□ -1.07
NUP54-211ENST00000512151 EBNA1BP2Q99848 306 aaKnown RBP8.34□□□□□ -1.07
NUP54-211ENST00000512151 CCDC77Q9BR77 488 aa8.34□□□□□ -1.07
NUP54-211ENST00000512151 FUT8Q9BYC5 575 aa8.34□□□□□ -1.07
NUP54-211ENST00000512151 CXorf56Q9H5V9 222 aa8.34□□□□□ -1.07
NUP54-211ENST00000512151 XAB2Q9HCS7 855 aaKnown RBP8.34□□□□□ -1.07
NUP54-211ENST00000512151 SAMD15Q9P1V8 674 aa8.34□□□□□ -1.07
NUP54-211ENST00000512151 NFU1Q9UMS0 254 aa8.34□□□□□ -1.07
NUP54-211ENST00000512151 CAMK2AQ9UQM7 478 aa8.34□□□□□ -1.07
NUP54-211ENST00000512151 SLC6A5Q9Y345 797 aa8.34□□□□□ -1.07
NUP54-211ENST00000512151 TCAF1Q9Y4C2 921 aa8.34□□□□□ -1.07
NUP54-211ENST00000512151 TEX264Q9Y6I9 313 aa8.34□□□□□ -1.07
NUP54-211ENST00000512151 MALRD1Q5VYJ5 2156 aa8.33□□□□□ -1.08
NUP54-211ENST00000512151 ALPK2Q86TB3 2170 aa8.33□□□□□ -1.08
NUP54-211ENST00000512151 MYOCOSA0A1B0GUC4 107 aa8.33□□□□□ -1.08
NUP54-211ENST00000512151 SDR42E2A6NKP2 422 aa8.33□□□□□ -1.08
NUP54-211ENST00000512151 C4orf51C9J302 202 aa8.33□□□□□ -1.08
NUP54-211ENST00000512151 SASH3O75995 380 aa8.33□□□□□ -1.08
NUP54-211ENST00000512151 ZNF888P0CJ79 500 aaPredicted RBP8.33□□□□□ -1.08
NUP54-211ENST00000512151 ALOX12P18054 663 aa8.33□□□□□ -1.08
NUP54-211ENST00000512151 CPOXP36551 454 aa8.33□□□□□ -1.08
NUP54-211ENST00000512151 ELK3P41970 407 aa8.33□□□□□ -1.08
NUP54-211ENST00000512151 HNRNPFP52597 415 aaKnown RBP8.33□□□□□ -1.08
NUP54-211ENST00000512151 EIF3BP55884 814 aaKnown RBP8.33□□□□□ -1.08
NUP54-211ENST00000512151 ARL4CP56559 192 aa8.33□□□□□ -1.08
NUP54-211ENST00000512151 ACVR1Q04771 509 aa8.33□□□□□ -1.08
NUP54-211ENST00000512151 PDIA2Q13087 525 aaKnown RBP8.33□□□□□ -1.08
NUP54-211ENST00000512151 PCID2Q5JVF3 399 aa8.33□□□□□ -1.08
NUP54-211ENST00000512151 TSTD2Q5T7W7 516 aa8.33□□□□□ -1.08
NUP54-211ENST00000512151 THEMIS2Q5TEJ8 643 aa8.33□□□□□ -1.08
NUP54-211ENST00000512151 VASNQ6EMK4 673 aa8.33□□□□□ -1.08
NUP54-211ENST00000512151 DNM1P46Q6ZS02 220 aa8.33□□□□□ -1.08
NUP54-211ENST00000512151 IL17RELQ6ZVW7 336 aa8.33□□□□□ -1.08
NUP54-211ENST00000512151 ZNF550Q7Z398 422 aa8.33□□□□□ -1.08
NUP54-211ENST00000512151 SCUBE1Q8IWY4 988 aa8.33□□□□□ -1.08
NUP54-211ENST00000512151 MFSD9Q8NBP5 474 aa8.33□□□□□ -1.08
NUP54-211ENST00000512151 TMEM52Q8NDY8 209 aa8.33□□□□□ -1.08
NUP54-211ENST00000512151 MFSD3Q96ES6 412 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms