RNA–Protein interactions for RNA: ENST00000511978.5

MATR3-218, Transcript of matrin 3, human

TSL 3

Gene MATR3, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-218	ENST00000511978	GOLPH3	Q9H4A6	298 aa		5.04	□□□□□ -1.6
MATR3-218	ENST00000511978	SEBOX	Q9HB31	216 aa	Predicted RBP	5.04	□□□□□ -1.6
MATR3-218	ENST00000511978	ETNK2	Q9NVF9	386 aa		5.04	□□□□□ -1.6
MATR3-218	ENST00000511978	ACSL5	Q9ULC5	683 aa		5.04	□□□□□ -1.6
MATR3-218	ENST00000511978	PCDHGB1	Q9Y5G3	927 aa		5.04	□□□□□ -1.6
MATR3-218	ENST00000511978	LYVE1	Q9Y5Y7	322 aa		5.04	□□□□□ -1.6
MATR3-218	ENST00000511978	SLCO1B1	Q9Y6L6	691 aa		5.04	□□□□□ -1.6
MATR3-218	ENST00000511978	RALGAPA1	Q6GYQ0	2036 aa		5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	GPR179	Q6PRD1	2367 aa		5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	C1orf226	A1L170	272 aa		5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	MACROD2	A1Z1Q3	448 aa		5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	MAGEA13P	A6NCF6	341 aa		5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	BTNL10	A8MVZ5	291 aa		5.03	□□□□□ -1.6
MATR3-218	ENST00000511978		A8MZ25	164 aa		5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	ZNF487	B1APH4	448 aa		5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	C10orf142	B7Z368	130 aa		5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	SCAMP1	O15126	338 aa		5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	LAT	O43561	262 aa		5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	NDUFS3	O75489	264 aa		5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	GJB3	O75712	270 aa		5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	PIGN	O95427	931 aa		5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	POP4	O95707	220 aa	Known RBP	5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	KDELR1	P24390	212 aa		5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	MAT2A	P31153	395 aa	Known RBP	5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	HSPA9	P38646	679 aa	Known RBP	5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	GARS	P41250	739 aa	Known RBP	5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	RGR	P47804	291 aa		5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	FASLG	P48023	281 aa		5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	MARCKSL1	P49006	195 aa		5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	LIMK1	P53667	647 aa		5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	ATXN3	P54252	364 aa	Predicted RBP	5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	NAP1L1	P55209	391 aa	Known RBP	5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	GSDMD	P57764	484 aa		5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	IRX4	P78413	519 aa		5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	GBE1	Q04446	702 aa		5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	RAD51	Q06609	339 aa		5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	SLC10A7	Q0GE19	358 aa		5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	GRIK2	Q13002	908 aa		5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	RFTN1	Q14699	578 aa	Predicted RBP	5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	PAFAH1B3	Q15102	231 aa	Known RBP	5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	ADIPOQ	Q15848	244 aa		5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	MYLK3	Q32MK0	819 aa		5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	ODF2	Q5BJF6	829 aa		5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	ZNF805	Q5CZA5	627 aa		5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	LRRC73	Q5JTD7	316 aa		5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	CFAP58	Q5T655	872 aa		5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	STPG1	Q5TH74	334 aa		5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	SEL1L3	Q68CR1	1132 aa		5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	CAPRIN2	Q6IMN6	1127 aa	Known RBP	5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	KLHL35	Q6PF15	583 aa		5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	GDPD4	Q6W3E5	623 aa		5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	MINDY1	Q8N5J2	469 aa		5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	ZNF830	Q96NB3	372 aa	Predicted RBP	5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	PSKH2	Q96QS6	385 aa		5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	MGME1	Q9BQP7	344 aa		5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	GTPBP2	Q9BX10	602 aa	Known RBP	5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	C1QTNF4	Q9BXJ3	329 aa		5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	GRPEL1	Q9HAV7	217 aa		5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	TRIM10	Q9UDY6	481 aa		5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	ITM2B	Q9Y287	266 aa		5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	ABCA7	Q8IZY2	2146 aa		5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	ADAMTS9	Q9P2N4	1935 aa		5.03	□□□□□ -1.6
MATR3-218	ENST00000511978	DMD	P11532	3685 aa		5.02	□□□□□ -1.61
MATR3-218	ENST00000511978	SHROOM3	Q8TF72	1996 aa		5.02	□□□□□ -1.61
MATR3-218	ENST00000511978	ANKRD36	A6QL64	1941 aa		5.02	□□□□□ -1.61
MATR3-218	ENST00000511978	TSPAN11	A1L157	253 aa		5.02	□□□□□ -1.61
MATR3-218	ENST00000511978	ZNF587B	E7ETH6	402 aa		5.02	□□□□□ -1.61
MATR3-218	ENST00000511978	CDX4	O14627	284 aa	Predicted RBP	5.02	□□□□□ -1.61
MATR3-218	ENST00000511978	SLC30A4	O14863	429 aa		5.02	□□□□□ -1.61
MATR3-218	ENST00000511978	HNRNPCL1	O60812	293 aa	Known RBP	5.02	□□□□□ -1.61
MATR3-218	ENST00000511978	OR2C1	O95371	312 aa		5.02	□□□□□ -1.61
MATR3-218	ENST00000511978	HLA-DQB2	P05538	268 aa		5.02	□□□□□ -1.61
MATR3-218	ENST00000511978	PRLR	P16471	622 aa		5.02	□□□□□ -1.61
MATR3-218	ENST00000511978	CTNNA1	P35221	906 aa	Known RBP	5.02	□□□□□ -1.61
MATR3-218	ENST00000511978	NUDT1	P36639	197 aa		5.02	□□□□□ -1.61
MATR3-218	ENST00000511978	CDKN2B	P42772	138 aa		5.02	□□□□□ -1.61
MATR3-218	ENST00000511978	CSNK1D	P48730	415 aa		5.02	□□□□□ -1.61
MATR3-218	ENST00000511978	CSNK1E	P49674	416 aa	Known RBP	5.02	□□□□□ -1.61
MATR3-218	ENST00000511978	C21orf59	P57076	290 aa		5.02	□□□□□ -1.61
MATR3-218	ENST00000511978	ARF3	P61204	181 aa	Predicted RBP	5.02	□□□□□ -1.61
MATR3-218	ENST00000511978	MAX	P61244	160 aa		5.02	□□□□□ -1.61
MATR3-218	ENST00000511978	AP1S1	P61966	158 aa		5.02	□□□□□ -1.61
MATR3-218	ENST00000511978	DYNLT1	P63172	113 aa		5.02	□□□□□ -1.61
MATR3-218	ENST00000511978	ARF1	P84077	181 aa	Known RBP	5.02	□□□□□ -1.61
MATR3-218	ENST00000511978	PPID	Q08752	370 aa	Known RBP	5.02	□□□□□ -1.61
MATR3-218	ENST00000511978	TFDP2	Q14188	446 aa		5.02	□□□□□ -1.61
MATR3-218	ENST00000511978	IZUMO4	Q1ZYL8	232 aa		5.02	□□□□□ -1.61
MATR3-218	ENST00000511978	TFDP3	Q5H9I0	405 aa		5.02	□□□□□ -1.61
MATR3-218	ENST00000511978	MARC1	Q5VT66	337 aa		5.02	□□□□□ -1.61
MATR3-218	ENST00000511978	MFSD7	Q6UXD7	560 aa		5.02	□□□□□ -1.61
MATR3-218	ENST00000511978	PRPF39	Q86UA1	669 aa	Known RBP	5.02	□□□□□ -1.61
MATR3-218	ENST00000511978	HORMAD1	Q86X24	394 aa		5.02	□□□□□ -1.61
MATR3-218	ENST00000511978	NRROS	Q86YC3	692 aa		5.02	□□□□□ -1.61
MATR3-218	ENST00000511978	LRRC49	Q8IUZ0	686 aa		5.02	□□□□□ -1.61
MATR3-218	ENST00000511978	CCDC50	Q8IVM0	306 aa		5.02	□□□□□ -1.61
MATR3-218	ENST00000511978	KATNAL2	Q8IYT4	538 aa		5.02	□□□□□ -1.61
MATR3-218	ENST00000511978	BBS5	Q8N3I7	341 aa		5.02	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms