RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 FBXL14Q8N1E6 418 aa5.04□□□□□ -1.6
GYPB-212ENST00000511198 LRRC75A-AS1Q8N1F1 130 aa5.04□□□□□ -1.6
GYPB-212ENST00000511198 MARVELD2Q8N4S9 558 aa5.04□□□□□ -1.6
GYPB-212ENST00000511198 IQCF1Q8N6M8 205 aa5.04□□□□□ -1.6
GYPB-212ENST00000511198 TEX9Q8N6V9 391 aa5.04□□□□□ -1.6
GYPB-212ENST00000511198 LRRC57Q8N9N7 239 aa5.04□□□□□ -1.6
GYPB-212ENST00000511198 C7orf57Q8NEG2 295 aa5.04□□□□□ -1.6
GYPB-212ENST00000511198 OR56A4Q8NGH8 313 aa5.04□□□□□ -1.6
GYPB-212ENST00000511198 OR52K2Q8NGK3 314 aa5.04□□□□□ -1.6
GYPB-212ENST00000511198 OR10G6Q8NH81 332 aa5.04□□□□□ -1.6
GYPB-212ENST00000511198 RAD54LQ92698 747 aa5.04□□□□□ -1.6
GYPB-212ENST00000511198 MAGOHBQ96A72 148 aaKnown RBP5.04□□□□□ -1.6
GYPB-212ENST00000511198 GBP5Q96PP8 586 aa5.04□□□□□ -1.6
GYPB-212ENST00000511198 ZNF317Q96PQ6 595 aaPredicted RBP5.04□□□□□ -1.6
GYPB-212ENST00000511198 FMO2Q99518 471 aa5.04□□□□□ -1.6
GYPB-212ENST00000511198 SH3GL3Q99963 347 aa5.04□□□□□ -1.6
GYPB-212ENST00000511198 SORBS1Q9BX66 1292 aaKnown RBP5.04□□□□□ -1.6
GYPB-212ENST00000511198 FRMD8Q9BZ67 464 aaPredicted RBP5.04□□□□□ -1.6
GYPB-212ENST00000511198 TKTL2Q9H0I9 626 aa5.04□□□□□ -1.6
GYPB-212ENST00000511198 GANQ9H2C0 597 aa5.04□□□□□ -1.6
GYPB-212ENST00000511198 ZHX3Q9H4I2 956 aa5.04□□□□□ -1.6
GYPB-212ENST00000511198 ABI3Q9P2A4 366 aa5.04□□□□□ -1.6
GYPB-212ENST00000511198 CTNNAL1Q9UBT7 734 aa5.04□□□□□ -1.6
GYPB-212ENST00000511198 IL36AQ9UHA7 158 aa5.04□□□□□ -1.6
GYPB-212ENST00000511198 SLC25A13Q9UJS0 675 aa5.04□□□□□ -1.6
GYPB-212ENST00000511198 CORO1CQ9ULV4 474 aaPredicted RBP5.04□□□□□ -1.6
GYPB-212ENST00000511198 NENFQ9UMX5 172 aa5.04□□□□□ -1.6
GYPB-212ENST00000511198 NUP210LQ5VU65 1888 aa5.03□□□□□ -1.6
GYPB-212ENST00000511198 E7ENQ6 273 aa5.03□□□□□ -1.6
GYPB-212ENST00000511198 TLX2O43763 284 aaPredicted RBP5.03□□□□□ -1.6
GYPB-212ENST00000511198 CEP104O60308 925 aa5.03□□□□□ -1.6
GYPB-212ENST00000511198 ZNF821O75541 412 aaPredicted RBP5.03□□□□□ -1.6
GYPB-212ENST00000511198 TM7SF2O76062 418 aa5.03□□□□□ -1.6
GYPB-212ENST00000511198 IGLV3-27P01718 113 aa5.03□□□□□ -1.6
GYPB-212ENST00000511198 NQO1P15559 274 aaKnown RBP5.03□□□□□ -1.6
GYPB-212ENST00000511198 PAX7P23759 505 aa5.03□□□□□ -1.6
GYPB-212ENST00000511198 ADORA2BP29275 332 aa5.03□□□□□ -1.6
GYPB-212ENST00000511198 TBX4P57082 545 aa5.03□□□□□ -1.6
GYPB-212ENST00000511198 MRPS25P82663 173 aaKnown RBP5.03□□□□□ -1.6
GYPB-212ENST00000511198 SARNPP82979 210 aaKnown RBP5.03□□□□□ -1.6
GYPB-212ENST00000511198 RHAGQ02094 409 aa5.03□□□□□ -1.6
GYPB-212ENST00000511198 SPARCL1Q14515 664 aa5.03□□□□□ -1.6
GYPB-212ENST00000511198 ARL13AQ5H913 290 aaPredicted RBP5.03□□□□□ -1.6
GYPB-212ENST00000511198 MS4A13Q5J8X5 152 aa5.03□□□□□ -1.6
GYPB-212ENST00000511198 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.03□□□□□ -1.6
GYPB-212ENST00000511198 ARSKQ6UWY0 536 aa5.03□□□□□ -1.6
GYPB-212ENST00000511198 SLC16A12Q6ZSM3 486 aa5.03□□□□□ -1.6
GYPB-212ENST00000511198 TRILQ7L0X0 811 aa5.03□□□□□ -1.6
GYPB-212ENST00000511198 TRPM8Q7Z2W7 1104 aa5.03□□□□□ -1.6
GYPB-212ENST00000511198 PEX26Q7Z412 305 aa5.03□□□□□ -1.6
GYPB-212ENST00000511198 CHERPQ8IWX8 916 aaKnown RBP5.03□□□□□ -1.6
GYPB-212ENST00000511198 CLYBLQ8N0X4 340 aa5.03□□□□□ -1.6
GYPB-212ENST00000511198 ERMNQ8TAM6 284 aa5.03□□□□□ -1.6
GYPB-212ENST00000511198 FAM110DQ8TAY7 271 aaPredicted RBP5.03□□□□□ -1.6
GYPB-212ENST00000511198 NEUROG1Q92886 237 aa5.03□□□□□ -1.6
GYPB-212ENST00000511198 ZMYND19Q96E35 227 aaPredicted RBP5.03□□□□□ -1.6
GYPB-212ENST00000511198 SAAL1Q96ER3 474 aa5.03□□□□□ -1.6
GYPB-212ENST00000511198 C9orf72Q96LT7 481 aa5.03□□□□□ -1.6
GYPB-212ENST00000511198 FER1L6-AS2Q96M78 137 aa5.03□□□□□ -1.6
GYPB-212ENST00000511198 RAB3IPQ96QF0 476 aaPredicted RBP5.03□□□□□ -1.6
GYPB-212ENST00000511198 NPAS1Q99742 590 aa5.03□□□□□ -1.6
GYPB-212ENST00000511198 SF3B5Q9BWJ5 86 aaKnown RBP5.03□□□□□ -1.6
GYPB-212ENST00000511198 NLNQ9BYT8 704 aa5.03□□□□□ -1.6
GYPB-212ENST00000511198 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.03□□□□□ -1.6
GYPB-212ENST00000511198 SDCBP2Q9H190 292 aa5.03□□□□□ -1.6
GYPB-212ENST00000511198 CARD9Q9H257 536 aa5.03□□□□□ -1.6
GYPB-212ENST00000511198 SLCO5A1Q9H2Y9 848 aa5.03□□□□□ -1.6
GYPB-212ENST00000511198 PLAC1Q9HBJ0 212 aa5.03□□□□□ -1.6
GYPB-212ENST00000511198 PNRC2Q9NPJ4 139 aaKnown RBP5.03□□□□□ -1.6
GYPB-212ENST00000511198 FAM49BQ9NUQ9 324 aa5.03□□□□□ -1.6
GYPB-212ENST00000511198 SELENONQ9NZV5 590 aa5.03□□□□□ -1.6
GYPB-212ENST00000511198 CNOT8Q9UFF9 292 aaKnown RBP5.03□□□□□ -1.6
GYPB-212ENST00000511198 BAIAP2L1Q9UHR4 511 aa5.03□□□□□ -1.6
GYPB-212ENST00000511198 RNF6Q9Y252 685 aa5.03□□□□□ -1.6
GYPB-212ENST00000511198 OR51B4Q9Y5P0 310 aa5.03□□□□□ -1.6
GYPB-212ENST00000511198 ANKRD36A6QL64 1941 aa5.02□□□□□ -1.61
GYPB-212ENST00000511198 A0A087X0T9 212 aa5.02□□□□□ -1.61
GYPB-212ENST00000511198 TRBV5-7A0A0A0MS05 114 aa5.02□□□□□ -1.61
GYPB-212ENST00000511198 A0A1W2PPR1 153 aa5.02□□□□□ -1.61
GYPB-212ENST00000511198 GTPBP10A4D1E9 387 aaKnown RBP5.02□□□□□ -1.61
GYPB-212ENST00000511198 GOLGA8IPA6NC78 632 aa5.02□□□□□ -1.61
GYPB-212ENST00000511198 MBD3L5A6NJ08 208 aaPredicted RBP5.02□□□□□ -1.61
GYPB-212ENST00000511198 GOLGA8JA6NMD2 632 aa5.02□□□□□ -1.61
GYPB-212ENST00000511198 KDM4EB2RXH2 506 aaPredicted RBP5.02□□□□□ -1.61
GYPB-212ENST00000511198 H0YCG3 227 aa5.02□□□□□ -1.61
GYPB-212ENST00000511198 RGS16O15492 202 aaPredicted RBP5.02□□□□□ -1.61
GYPB-212ENST00000511198 AHCYL1O43865 530 aa5.02□□□□□ -1.61
GYPB-212ENST00000511198 ATP5HO75947 161 aa5.02□□□□□ -1.61
GYPB-212ENST00000511198 TNFRSF6BO95407 300 aa5.02□□□□□ -1.61
GYPB-212ENST00000511198 EML2O95834 649 aa5.02□□□□□ -1.61
GYPB-212ENST00000511198 C9P02748 559 aa5.02□□□□□ -1.61
GYPB-212ENST00000511198 H2AFZP0C0S5 128 aa5.02□□□□□ -1.61
GYPB-212ENST00000511198 FAM228BP0C875 321 aa5.02□□□□□ -1.61
GYPB-212ENST00000511198 FAM200BP0CF97 657 aa5.02□□□□□ -1.61
GYPB-212ENST00000511198 PVRP15151 417 aa5.02□□□□□ -1.61
GYPB-212ENST00000511198 CHN1P15882 459 aa5.02□□□□□ -1.61
GYPB-212ENST00000511198 FERP16591 822 aa5.02□□□□□ -1.61
GYPB-212ENST00000511198 GCKP35557 465 aa5.02□□□□□ -1.61
GYPB-212ENST00000511198 FASLGP48023 281 aa5.02□□□□□ -1.61
GYPB-212ENST00000511198 POLR2FP61218 127 aaKnown RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms