RNA–Protein interactions for RNA: ENST00000510541.5

CLDND1-221, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-221ENST00000510541 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.13■□□□□ 0.17
CLDND1-221ENST00000510541 PTPMT1Q8WUK0 201 aaPredicted RBP16.13■□□□□ 0.17
CLDND1-221ENST00000510541 MTFMTQ96DP5 389 aaKnown RBP16.13■□□□□ 0.17
CLDND1-221ENST00000510541 FCRL1Q96LA6 429 aa16.13■□□□□ 0.17
CLDND1-221ENST00000510541 TMBIM4Q9HC24 238 aa16.13■□□□□ 0.17
CLDND1-221ENST00000510541 ARGLU1Q9NWB6 273 aaPredicted RBP16.13■□□□□ 0.17
CLDND1-221ENST00000510541 TAS2R7Q9NYW3 318 aa16.13■□□□□ 0.17
CLDND1-221ENST00000510541 FBXW2Q9UKT8 454 aa16.13■□□□□ 0.17
CLDND1-221ENST00000510541 CES1P1Q9UKY3 287 aa16.13■□□□□ 0.17
CLDND1-221ENST00000510541 TMED5Q9Y3A6 229 aa16.13■□□□□ 0.17
CLDND1-221ENST00000510541 PCDHA9Q9Y5H5 950 aa16.13■□□□□ 0.17
CLDND1-221ENST00000510541 DYTNA2CJ06 578 aa16.12■□□□□ 0.17
CLDND1-221ENST00000510541 TMEM114B3SHH9 223 aa16.12■□□□□ 0.17
CLDND1-221ENST00000510541 SLC28A1O00337 649 aa16.12■□□□□ 0.17
CLDND1-221ENST00000510541 DYRK3O43781 588 aa16.12■□□□□ 0.17
CLDND1-221ENST00000510541 CHEK2O96017 543 aa16.12■□□□□ 0.17
CLDND1-221ENST00000510541 PRB1P04280 392 aa16.12■□□□□ 0.17
CLDND1-221ENST00000510541 COX7A2P14406 83 aa16.12■□□□□ 0.17
CLDND1-221ENST00000510541 PCSK2P16519 638 aa16.12■□□□□ 0.17
CLDND1-221ENST00000510541 FOXA1P55317 472 aa16.12■□□□□ 0.17
CLDND1-221ENST00000510541 ACSM2AQ08AH3 577 aa16.12■□□□□ 0.17
CLDND1-221ENST00000510541 KIAA0040Q15053 153 aa16.12■□□□□ 0.17
CLDND1-221ENST00000510541 UGT3A2Q3SY77 523 aa16.12■□□□□ 0.17
CLDND1-221ENST00000510541 NDUFAF5Q5TEU4 345 aa16.12■□□□□ 0.17
CLDND1-221ENST00000510541 ABHD17BQ5VST6 288 aa16.12■□□□□ 0.17
CLDND1-221ENST00000510541 ACSM2BQ68CK6 577 aa16.12■□□□□ 0.17
CLDND1-221ENST00000510541 LRRC34Q8IZ02 419 aa16.12■□□□□ 0.17
CLDND1-221ENST00000510541 EFCAB3Q8N7B9 438 aa16.12■□□□□ 0.17
CLDND1-221ENST00000510541 OR1N1Q8NGS0 311 aa16.12■□□□□ 0.17
CLDND1-221ENST00000510541 RAB3IL1Q8TBN0 382 aa16.12■□□□□ 0.17
CLDND1-221ENST00000510541 TM4SF18Q96CE8 201 aa16.12■□□□□ 0.17
CLDND1-221ENST00000510541 ERP27Q96DN0 273 aa16.12■□□□□ 0.17
CLDND1-221ENST00000510541 RBM18Q96H35 190 aaKnown RBP16.12■□□□□ 0.17
CLDND1-221ENST00000510541 FAIM2Q9BWQ8 316 aa16.12■□□□□ 0.17
CLDND1-221ENST00000510541 SORBS1Q9BX66 1292 aaKnown RBP16.12■□□□□ 0.17
CLDND1-221ENST00000510541 ABI3Q9P2A4 366 aa16.12■□□□□ 0.17
CLDND1-221ENST00000510541 CLCA3PQ9Y6N3 262 aa16.12■□□□□ 0.17
CLDND1-221ENST00000510541 FASNP49327 2511 aaKnown RBP16.12■□□□□ 0.17
CLDND1-221ENST00000510541 HELZ2Q9BYK8 2649 aaKnown RBP16.12■□□□□ 0.17
CLDND1-221ENST00000510541 IGHV3-20A0A0C4DH32 117 aa16.11■□□□□ 0.17
CLDND1-221ENST00000510541 FGF17O60258 216 aa16.11■□□□□ 0.17
CLDND1-221ENST00000510541 AIFM1O95831 613 aa16.11■□□□□ 0.17
CLDND1-221ENST00000510541 IGKV3-11P04433 115 aa16.11■□□□□ 0.17
CLDND1-221ENST00000510541 SERPINE1P05121 402 aa16.11■□□□□ 0.17
CLDND1-221ENST00000510541 IFI6P09912 130 aa16.11■□□□□ 0.17
CLDND1-221ENST00000510541 ATXN8OSP0DMR3 200 aa16.11■□□□□ 0.17
CLDND1-221ENST00000510541 ALOX15P16050 662 aaPredicted RBP16.11■□□□□ 0.17
CLDND1-221ENST00000510541 TIA1P31483 386 aaKnown RBP eCLIP16.11■□□□□ 0.17
CLDND1-221ENST00000510541 CD97P48960 835 aa16.11■□□□□ 0.17
CLDND1-221ENST00000510541 TNFSF10P50591 281 aa16.11■□□□□ 0.17
CLDND1-221ENST00000510541 FOLH1Q04609 750 aa16.11■□□□□ 0.17
CLDND1-221ENST00000510541 CEBPEQ15744 281 aa16.11■□□□□ 0.17
CLDND1-221ENST00000510541 SMU1Q2TAY7 513 aa16.11■□□□□ 0.17
CLDND1-221ENST00000510541 ARL13AQ5H913 290 aaPredicted RBP16.11■□□□□ 0.17
CLDND1-221ENST00000510541 ACER2Q5QJU3 275 aa16.11■□□□□ 0.17
CLDND1-221ENST00000510541 AGBL2Q5U5Z8 902 aa16.11■□□□□ 0.17
CLDND1-221ENST00000510541 C18orf63Q68DL7 685 aa16.11■□□□□ 0.17
CLDND1-221ENST00000510541 SLC48A1Q6P1K1 146 aa16.11■□□□□ 0.17
CLDND1-221ENST00000510541 IKBIPQ70UQ0 350 aa16.11■□□□□ 0.17
CLDND1-221ENST00000510541 NUDCD3Q8IVD9 361 aa16.11■□□□□ 0.17
CLDND1-221ENST00000510541 GPALPP1Q8IXQ4 340 aa16.11■□□□□ 0.17
CLDND1-221ENST00000510541 C1orf52Q8N6N3 182 aaKnown RBP16.11■□□□□ 0.17
CLDND1-221ENST00000510541 Q8NA96 180 aa16.11■□□□□ 0.17
CLDND1-221ENST00000510541 FBXL20Q96IG2 436 aa16.11■□□□□ 0.17
CLDND1-221ENST00000510541 KCNK13Q9HB14 408 aa16.11■□□□□ 0.17
CLDND1-221ENST00000510541 PFDN4Q9NQP4 134 aa16.11■□□□□ 0.17
CLDND1-221ENST00000510541 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.11■□□□□ 0.17
CLDND1-221ENST00000510541 STMN3Q9NZ72 180 aa16.11■□□□□ 0.17
CLDND1-221ENST00000510541 TRAF6Q9Y4K3 522 aa16.11■□□□□ 0.17
CLDND1-221ENST00000510541 TIMM22Q9Y584 194 aa16.11■□□□□ 0.17
CLDND1-221ENST00000510541 DNAJC15Q9Y5T4 150 aa16.11■□□□□ 0.17
CLDND1-221ENST00000510541 TRAV17A0A0B4J275 112 aa16.1■□□□□ 0.17
CLDND1-221ENST00000510541 MASP2O00187 686 aa16.1■□□□□ 0.17
CLDND1-221ENST00000510541 RGS14O43566 566 aa16.1■□□□□ 0.17
CLDND1-221ENST00000510541 DDAH2O95865 285 aa16.1■□□□□ 0.17
CLDND1-221ENST00000510541 ATP1B1P05026 303 aa16.1■□□□□ 0.17
CLDND1-221ENST00000510541 NR1D1P20393 614 aa16.1■□□□□ 0.17
CLDND1-221ENST00000510541 HTR6P50406 440 aa16.1■□□□□ 0.17
CLDND1-221ENST00000510541 MLF1P58340 268 aa16.1■□□□□ 0.17
CLDND1-221ENST00000510541 RAE1P78406 368 aaKnown RBP16.1■□□□□ 0.17
CLDND1-221ENST00000510541 HEPACAMQ14CZ8 416 aa16.1■□□□□ 0.17
CLDND1-221ENST00000510541 SGO1Q5FBB7 561 aa16.1■□□□□ 0.17
CLDND1-221ENST00000510541 TCHHL1Q5QJ38 904 aaPredicted RBP16.1■□□□□ 0.17
CLDND1-221ENST00000510541 RPS19BP1Q86WX3 136 aaKnown RBP16.1■□□□□ 0.17
CLDND1-221ENST00000510541 HORMAD2Q8N7B1 307 aa16.1■□□□□ 0.17
CLDND1-221ENST00000510541 OR4K14Q8NGD5 310 aa16.1■□□□□ 0.17
CLDND1-221ENST00000510541 NUBPLQ8TB37 319 aa16.1■□□□□ 0.17
CLDND1-221ENST00000510541 KCNA7Q96RP8 456 aa16.1■□□□□ 0.17
CLDND1-221ENST00000510541 TNFRSF12AQ9NP84 129 aa16.1■□□□□ 0.17
CLDND1-221ENST00000510541 PCDHGA10Q9Y5H3 936 aa16.1■□□□□ 0.17
CLDND1-221ENST00000510541 PRRC2CQ9Y520 2896 aaKnown RBP16.1■□□□□ 0.17
CLDND1-221ENST00000510541 OR5H15A6NDH6 313 aa16.09■□□□□ 0.17
CLDND1-221ENST00000510541 OR6C76A6NM76 312 aa16.09■□□□□ 0.17
CLDND1-221ENST00000510541 TBX19O60806 448 aa16.09■□□□□ 0.17
CLDND1-221ENST00000510541 LDB3O75112 727 aa16.09■□□□□ 0.17
CLDND1-221ENST00000510541 SH3BGRLO75368 114 aa16.09■□□□□ 0.17
CLDND1-221ENST00000510541 CRCPO75575 148 aa16.09■□□□□ 0.17
CLDND1-221ENST00000510541 ZFAND5O76080 213 aa16.09■□□□□ 0.17
CLDND1-221ENST00000510541 MYO1DO94832 1006 aa16.09■□□□□ 0.17
CLDND1-221ENST00000510541 SLITRK5O94991 958 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms