RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 L3MBTL4Q8NA19 623 aa13.76□□□□□ -0.21
UBE2D3-228ENST00000508974 MORN4Q8NDC4 146 aa13.76□□□□□ -0.21
UBE2D3-228ENST00000508974 ASB15Q8WXK1 588 aa13.76□□□□□ -0.21
UBE2D3-228ENST00000508974 UCN3Q969E3 161 aa13.76□□□□□ -0.21
UBE2D3-228ENST00000508974 ZNF717Q9BY31 904 aaPredicted RBP13.76□□□□□ -0.21
UBE2D3-228ENST00000508974 MRPL46Q9H2W6 279 aaKnown RBP13.76□□□□□ -0.21
UBE2D3-228ENST00000508974 TRIM45Q9H8W5 580 aaPredicted RBP13.76□□□□□ -0.21
UBE2D3-228ENST00000508974 ZBTB26Q9HCK0 441 aa13.76□□□□□ -0.21
UBE2D3-228ENST00000508974 PHF11Q9UIL8 331 aa13.76□□□□□ -0.21
UBE2D3-228ENST00000508974 KLF13Q9Y2Y9 288 aaPredicted RBP13.76□□□□□ -0.21
UBE2D3-228ENST00000508974 YARS2Q9Y2Z4 477 aaKnown RBP13.76□□□□□ -0.21
UBE2D3-228ENST00000508974 A0A1B0GTL3 188 aa13.75□□□□□ -0.21
UBE2D3-228ENST00000508974 A8MT66 165 aa13.75□□□□□ -0.21
UBE2D3-228ENST00000508974 A8MVJ9 347 aa13.75□□□□□ -0.21
UBE2D3-228ENST00000508974 G3V3Y1 287 aa13.75□□□□□ -0.21
UBE2D3-228ENST00000508974 STX16-NPEPL1H3BU86 382 aa13.75□□□□□ -0.21
UBE2D3-228ENST00000508974 GOLGA8RI6L899 631 aa13.75□□□□□ -0.21
UBE2D3-228ENST00000508974 HRKO00198 91 aa13.75□□□□□ -0.21
UBE2D3-228ENST00000508974 PPP6CO00743 305 aa13.75□□□□□ -0.21
UBE2D3-228ENST00000508974 STX16O14662 325 aa13.75□□□□□ -0.21
UBE2D3-228ENST00000508974 TFECO14948 347 aaPredicted RBP13.75□□□□□ -0.21
UBE2D3-228ENST00000508974 PEX1O43933 1283 aa13.75□□□□□ -0.21
UBE2D3-228ENST00000508974 CDC40O60508 579 aaKnown RBP eCLIP13.75□□□□□ -0.21
UBE2D3-228ENST00000508974 MLYCDO95822 493 aa13.75□□□□□ -0.21
UBE2D3-228ENST00000508974 SBK3P0C264 359 aa13.75□□□□□ -0.21
UBE2D3-228ENST00000508974 NR2F6P10588 404 aa13.75□□□□□ -0.21
UBE2D3-228ENST00000508974 COL6A2P12110 1019 aa13.75□□□□□ -0.21
UBE2D3-228ENST00000508974 TLX1P31314 330 aaPredicted RBP13.75□□□□□ -0.21
UBE2D3-228ENST00000508974 BSGP35613 385 aa13.75□□□□□ -0.21
UBE2D3-228ENST00000508974 DCTP40126 519 aa13.75□□□□□ -0.21
UBE2D3-228ENST00000508974 BUD31P41223 144 aaPredicted RBP13.75□□□□□ -0.21
UBE2D3-228ENST00000508974 SOX3P41225 446 aa13.75□□□□□ -0.21
UBE2D3-228ENST00000508974 CA7P43166 264 aa13.75□□□□□ -0.21
UBE2D3-228ENST00000508974 HK2P52789 917 aa13.75□□□□□ -0.21
UBE2D3-228ENST00000508974 CDH13P55290 713 aa13.75□□□□□ -0.21
UBE2D3-228ENST00000508974 RNF4P78317 190 aa13.75□□□□□ -0.21
UBE2D3-228ENST00000508974 TRAF3Q13114 568 aa13.75□□□□□ -0.21
UBE2D3-228ENST00000508974 C3AR1Q16581 482 aa13.75□□□□□ -0.21
UBE2D3-228ENST00000508974 NUDT13Q86X67 352 aa13.75□□□□□ -0.21
UBE2D3-228ENST00000508974 SIAH3Q8IW03 269 aa13.75□□□□□ -0.21
UBE2D3-228ENST00000508974 ZCCHC7Q8N3Z6 543 aaKnown RBP13.75□□□□□ -0.21
UBE2D3-228ENST00000508974 OR4F6Q8NGB9 312 aa13.75□□□□□ -0.21
UBE2D3-228ENST00000508974 RELTQ969Z4 430 aa13.75□□□□□ -0.21
UBE2D3-228ENST00000508974 CCDC120Q96HB5 630 aa13.75□□□□□ -0.21
UBE2D3-228ENST00000508974 RASL10BQ96S79 203 aa13.75□□□□□ -0.21
UBE2D3-228ENST00000508974 MRPL57Q9BQC6 102 aaKnown RBP13.75□□□□□ -0.21
UBE2D3-228ENST00000508974 CNPPD1Q9BV87 410 aa13.75□□□□□ -0.21
UBE2D3-228ENST00000508974 FARSBQ9NSD9 589 aaKnown RBP13.75□□□□□ -0.21
UBE2D3-228ENST00000508974 HPF1Q9NWY4 346 aa13.75□□□□□ -0.21
UBE2D3-228ENST00000508974 MS4A12Q9NXJ0 267 aa13.75□□□□□ -0.21
UBE2D3-228ENST00000508974 MYOTQ9UBF9 498 aa13.75□□□□□ -0.21
UBE2D3-228ENST00000508974 SUCOQ9UBS9 1254 aaKnown RBP13.75□□□□□ -0.21
UBE2D3-228ENST00000508974 COPS7AQ9UBW8 275 aa13.75□□□□□ -0.21
UBE2D3-228ENST00000508974 TMCO1Q9UM00 188 aa13.75□□□□□ -0.21
UBE2D3-228ENST00000508974 TSC22D4Q9Y3Q8 395 aa13.75□□□□□ -0.21
UBE2D3-228ENST00000508974 A0A0A6YYD5 115 aa13.74□□□□□ -0.21
UBE2D3-228ENST00000508974 A0A1W2PR48 441 aa13.74□□□□□ -0.21
UBE2D3-228ENST00000508974 SYNDIG1LA6NDD5 238 aa13.74□□□□□ -0.21
UBE2D3-228ENST00000508974 KLRC4-KLRK1H3BQV0 150 aa13.74□□□□□ -0.21
UBE2D3-228ENST00000508974 PROM1O43490 865 aa13.74□□□□□ -0.21
UBE2D3-228ENST00000508974 ASNA1O43681 348 aa13.74□□□□□ -0.21
UBE2D3-228ENST00000508974 HS6ST1O60243 411 aa13.74□□□□□ -0.21
UBE2D3-228ENST00000508974 AIFM1O95831 613 aa13.74□□□□□ -0.21
UBE2D3-228ENST00000508974 RPS17P08708 135 aaKnown RBP13.74□□□□□ -0.21
UBE2D3-228ENST00000508974 ABHD2P08910 425 aa13.74□□□□□ -0.21
UBE2D3-228ENST00000508974 FAM58BPP0C7Q3 252 aa13.74□□□□□ -0.21
UBE2D3-228ENST00000508974 ABOP16442 354 aa13.74□□□□□ -0.21
UBE2D3-228ENST00000508974 PTGER1P34995 402 aa13.74□□□□□ -0.21
UBE2D3-228ENST00000508974 STT3AP46977 705 aa13.74□□□□□ -0.21
UBE2D3-228ENST00000508974 CASP6P55212 293 aa13.74□□□□□ -0.21
UBE2D3-228ENST00000508974 PLIN5Q00G26 463 aa13.74□□□□□ -0.21
UBE2D3-228ENST00000508974 CUL3Q13618 768 aa13.74□□□□□ -0.21
UBE2D3-228ENST00000508974 ZNF750Q32MQ0 723 aa13.74□□□□□ -0.21
UBE2D3-228ENST00000508974 LGSNQ5TDP6 509 aa13.74□□□□□ -0.21
UBE2D3-228ENST00000508974 FRG2Q64ET8 278 aa13.74□□□□□ -0.21
UBE2D3-228ENST00000508974 C3P1Q6ZMU1 363 aa13.74□□□□□ -0.21
UBE2D3-228ENST00000508974 NCCRP1Q6ZVX7 275 aaPredicted RBP13.74□□□□□ -0.21
UBE2D3-228ENST00000508974 TRMT10CQ7L0Y3 403 aaKnown RBP13.74□□□□□ -0.21
UBE2D3-228ENST00000508974 MILR1Q7Z6M3 343 aa13.74□□□□□ -0.21
UBE2D3-228ENST00000508974 PSD4Q8NDX1 1056 aa13.74□□□□□ -0.21
UBE2D3-228ENST00000508974 ZNF721Q8TF20 911 aa13.74□□□□□ -0.21
UBE2D3-228ENST00000508974 TANKQ92844 425 aa13.74□□□□□ -0.21
UBE2D3-228ENST00000508974 FRG2BQ96QU4 278 aa13.74□□□□□ -0.21
UBE2D3-228ENST00000508974 HBEGFQ99075 208 aa13.74□□□□□ -0.21
UBE2D3-228ENST00000508974 MRPL1Q9BYD6 325 aaKnown RBP13.74□□□□□ -0.21
UBE2D3-228ENST00000508974 TIMMDC1Q9NPL8 285 aa13.74□□□□□ -0.21
UBE2D3-228ENST00000508974 LYARQ9NX58 379 aaKnown RBP13.74□□□□□ -0.21
UBE2D3-228ENST00000508974 TMEM216Q9P0N5 145 aa13.74□□□□□ -0.21
UBE2D3-228ENST00000508974 TBK1Q9UHD2 729 aa13.74□□□□□ -0.21
UBE2D3-228ENST00000508974 ASB4Q9Y574 426 aa13.74□□□□□ -0.21
UBE2D3-228ENST00000508974 GTF3C1Q12789 2109 aa13.73□□□□□ -0.21
UBE2D3-228ENST00000508974 CELSR2Q9HCU4 2923 aa13.73□□□□□ -0.21
UBE2D3-228ENST00000508974 A0A0G2JMM0 328 aa13.73□□□□□ -0.21
UBE2D3-228ENST00000508974 A0A1W2PPB8 328 aa13.73□□□□□ -0.21
UBE2D3-228ENST00000508974 A0A1W2PRS3 328 aa13.73□□□□□ -0.21
UBE2D3-228ENST00000508974 A0A1W2PS29 197 aa13.73□□□□□ -0.21
UBE2D3-228ENST00000508974 PINLYPA6NC86 204 aa13.73□□□□□ -0.21
UBE2D3-228ENST00000508974 KIR3DP1A8MWS1 328 aa13.73□□□□□ -0.21
UBE2D3-228ENST00000508974 PRSS44E7EML9 344 aa13.73□□□□□ -0.21
UBE2D3-228ENST00000508974 FOXE1O00358 373 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms