RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 RORAP35398 523 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 CDKN2CP42773 168 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 NDUFV1P49821 464 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 SERPINB9P50453 376 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 CCR5P51681 352 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 MAPK12P53778 367 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 FKBP3Q00688 224 aaKnown RBP3.74□□□□□ -1.81
NEDD4-209ENST00000508871 TMEM62Q0P6H9 643 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 MMRN1Q13201 1228 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 SLAQ13239 276 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 PDE7AQ13946 482 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 KIF19Q2TAC6 998 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 ELOA3BQ3SY89 546 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 TMEM31Q5JXX7 168 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 GPR153Q6NV75 609 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 LRRC55Q6ZSA7 311 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 CCDC103Q8IW40 242 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 CYP4Z2PQ8N1L4 340 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 OR6Q1Q8NGQ2 317 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 OR1L4Q8NGR5 311 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 ANGPTL6Q8NI99 470 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 GRPEL2Q8TAA5 225 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 CLEC4CQ8WTT0 213 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 ABHD8Q96I13 439 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 PLEKHG4BQ96PX9 1271 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 EPYCQ99645 322 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 ZYG11BQ9C0D3 744 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 SRRQ9GZT4 340 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 ADAP2Q9NPF8 381 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 RNF146Q9NTX7 359 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 ABHD10Q9NUJ1 306 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 ELOVL7A1L3X0 281 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 CENPBD1B2RD01 187 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 M0R082 166 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 ADAMTS4O75173 837 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 CYP7B1O75881 506 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 BMP10O95393 424 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 FRKP42685 505 aaPredicted RBP3.73□□□□□ -1.81
NEDD4-209ENST00000508871 GCLMP48507 274 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 SLC26A2P50443 739 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 CLCN3P51790 818 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 AKR1D1P51857 326 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 PITPNAQ00169 270 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 MAT1AQ00266 395 aaKnown RBP3.73□□□□□ -1.81
NEDD4-209ENST00000508871 LIPEQ05469 1076 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 VGLL4Q14135 290 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 KYAT1Q16773 422 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 CD300EQ496F6 205 aaPredicted RBP3.73□□□□□ -1.81
NEDD4-209ENST00000508871 MANEALQ5VSG8 457 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 SEL1L3Q68CR1 1132 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 KIAA1324Q6UXG2 1013 aaKnown RBP3.73□□□□□ -1.81
NEDD4-209ENST00000508871 TMEM182Q6ZP80 229 aaPredicted RBP3.73□□□□□ -1.81
NEDD4-209ENST00000508871 Q6ZPB1 254 aaPredicted RBP3.73□□□□□ -1.81
NEDD4-209ENST00000508871 VRK2Q86Y07 508 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 CCDC36Q8IYA8 594 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 SPATA6LQ8N4H0 392 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 COLGALT1Q8NBJ5 622 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 GTF2H4Q92759 462 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 ZBTB8AQ96BR9 441 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 BTBD6Q96KE9 485 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 FEM1AQ9BSK4 669 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 TMEM43Q9BTV4 400 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 FTHL17Q9BXU8 183 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 ILKAPQ9H0C8 392 aaPredicted RBP3.73□□□□□ -1.81
NEDD4-209ENST00000508871 DNTTIP1Q9H147 329 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 P2RY12Q9H244 342 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 Q9H521 79 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 GEMIN7Q9H840 131 aaKnown RBP3.73□□□□□ -1.81
NEDD4-209ENST00000508871 BCO1Q9HAY6 547 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 PAK6Q9NQU5 681 aaPredicted RBP3.73□□□□□ -1.81
NEDD4-209ENST00000508871 CYP39A1Q9NYL5 469 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 ANAPC7Q9UJX3 599 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 GDF2Q9UK05 429 aaPredicted RBP3.73□□□□□ -1.81
NEDD4-209ENST00000508871 VANGL2Q9ULK5 521 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 ANK1P16157 1881 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 FAM90A27PA6NNH2 459 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 PP2D1A8MPX8 630 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 AGAP14A8MT82 685 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 TSTD3H0UI37 97 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 M0QYT0 321 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 KCNAB3O43448 404 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 TLX3O43711 291 aaPredicted RBP3.73□□□□□ -1.81
NEDD4-209ENST00000508871 SLC43A1O75387 559 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 DIRAS1O95057 198 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 FASP25445 335 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 CYLC1P35663 651 aaPredicted RBP3.73□□□□□ -1.81
NEDD4-209ENST00000508871 ARCN1P48444 511 aaKnown RBP3.73□□□□□ -1.81
NEDD4-209ENST00000508871 PPP3CAQ08209 521 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 ECH1Q13011 328 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 TUBB3Q13509 450 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 EXT1Q16394 746 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 ABLIM2Q6H8Q1 611 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 ZNF704Q6ZNC4 412 aaPredicted RBP3.73□□□□□ -1.81
NEDD4-209ENST00000508871 FAM181AQ8N9Y4 354 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 SCCPDHQ8NBX0 429 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 PROKR2Q8NFJ6 384 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 OR5AN1Q8NGI8 311 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 OR6S1Q8NH40 331 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 DUSP19Q8WTR2 217 aa3.73□□□□□ -1.81
NEDD4-209ENST00000508871 PROX1Q92786 737 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms