RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 PRAMEF14Q5SWL7 426 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 PRAMEF13Q5VWM6 474 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 KIAA1161Q6NSJ0 714 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 FAM92BQ6ZTR7 304 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 SLC46A3Q7Z3Q1 461 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 CCDC71Q8IV32 467 aaPredicted RBP10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 DNASE1L2Q92874 299 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 SH3KBP1Q96B97 665 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 MENTQ9BUN1 341 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 BTBD2Q9BX70 525 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 TMEM38AQ9H6F2 299 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 PHPT1Q9NRX4 125 aaPredicted RBP10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 INIPQ9NRY2 104 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 MOSPD1Q9UJG1 213 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 PCDHGA4Q9Y5G9 962 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 LYVE1Q9Y5Y7 322 aa10.5□□□□□ -0.73
SH3RF1-203ENST00000508685 ARRDC5A6NEK1 342 aa10.49□□□□□ -0.73
SH3RF1-203ENST00000508685 AGAP5A6NIR3 686 aa10.49□□□□□ -0.73
SH3RF1-203ENST00000508685 H0Y8X5 98 aa10.49□□□□□ -0.73
SH3RF1-203ENST00000508685 LCKP06239 509 aa10.49□□□□□ -0.73
SH3RF1-203ENST00000508685 ASGR2P07307 311 aa10.49□□□□□ -0.73
SH3RF1-203ENST00000508685 C1GALT1C1LP0DN25 315 aa10.49□□□□□ -0.73
SH3RF1-203ENST00000508685 KELP23276 732 aa10.49□□□□□ -0.73
SH3RF1-203ENST00000508685 TMEM236Q5W0B7 351 aa10.49□□□□□ -0.73
SH3RF1-203ENST00000508685 TRIM40Q6P9F5 258 aa10.49□□□□□ -0.73
SH3RF1-203ENST00000508685 NXPE4Q6UWF7 544 aa10.49□□□□□ -0.73
SH3RF1-203ENST00000508685 SLC22A16Q86VW1 577 aa10.49□□□□□ -0.73
SH3RF1-203ENST00000508685 CLECL1Q8IZS7 167 aa10.49□□□□□ -0.73
SH3RF1-203ENST00000508685 OR10G2Q8NGC3 310 aa10.49□□□□□ -0.73
SH3RF1-203ENST00000508685 OR52N2Q8NGI0 321 aa10.49□□□□□ -0.73
SH3RF1-203ENST00000508685 RPLP0P6Q8NHW5 317 aa10.49□□□□□ -0.73
SH3RF1-203ENST00000508685 MTERF3Q96E29 417 aa10.49□□□□□ -0.73
SH3RF1-203ENST00000508685 WDR34Q96EX3 536 aa10.49□□□□□ -0.73
SH3RF1-203ENST00000508685 SIPA1Q96FS4 1042 aa10.49□□□□□ -0.73
SH3RF1-203ENST00000508685 MRGPRX1Q96LB2 322 aa10.49□□□□□ -0.73
SH3RF1-203ENST00000508685 MAPKAP1Q9BPZ7 522 aa10.49□□□□□ -0.73
SH3RF1-203ENST00000508685 EFCAB11Q9BUY7 163 aa10.49□□□□□ -0.73
SH3RF1-203ENST00000508685 EHD1Q9H4M9 534 aa10.49□□□□□ -0.73
SH3RF1-203ENST00000508685 TAC3Q9UHF0 121 aa10.49□□□□□ -0.73
SH3RF1-203ENST00000508685 ZNF229Q9UJW7 825 aa10.49□□□□□ -0.73
SH3RF1-203ENST00000508685 MKLN1Q9UL63 735 aa10.49□□□□□ -0.73
SH3RF1-203ENST00000508685 POM121BA6NF01 834 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 EFCAB10A6NFE3 127 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 OR52A4PA6NMU1 304 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 FOXE1O00358 373 aaPredicted RBP10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 MED26O95402 600 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 PTTG1O95997 202 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 TGFB1P01137 390 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 EPHA2P29317 976 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 TIA1P31483 386 aaKnown RBP eCLIP10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 HMGA2P52926 109 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 CLDN2P57739 230 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 MLF2Q15773 248 aaPredicted RBP10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 ZNF630Q2M218 657 aaPredicted RBP10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 PUS10Q3MIT2 529 aaKnown RBP10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 TJAP1Q5JTD0 557 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 GCNT6Q5T4J0 391 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 TMEM92Q6UXU6 159 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 ZNF367Q7RTV3 350 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 STX19Q8N4C7 294 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 SLC44A3Q8N4M1 653 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 SPPL2AQ8TCT8 520 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 GGHQ92820 318 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 C12orf66Q96MD2 445 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 FEVQ99581 238 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 DPH2Q9BQC3 489 aaPredicted RBP10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 RACGAP1Q9H0H5 632 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 OR51B5Q9H339 312 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 REEP4Q9H6H4 257 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 DMRT3Q9NQL9 472 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 CNOT2Q9NZN8 540 aaKnown RBP10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 NDUFAF4Q9P032 175 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 RAPGEFL1Q9UHV5 662 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 CD207Q9UJ71 328 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 ERVK-11Q9UQG0 969 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 CA5BQ9Y2D0 317 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 BTBD3Q9Y2F9 522 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 GNG14A0A1W2PPG7 69 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 GPR89AB7ZAQ6 455 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 M0R082 166 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 YY2O15391 372 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 PI15O43692 258 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 NARSO43776 548 aaKnown RBP10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 KRT75O95678 551 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 GPR89BP0CG08 455 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 ERGP11308 486 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 NDUFV2P19404 249 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 TEAD1P28347 426 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 ALDH4A1P30038 563 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 ACSL1P33121 698 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 SOX6P35712 828 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 LIPAP38571 399 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 DEFA1P59665 94 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 DEFA3P59666 94 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 INAVAQ3KP66 663 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 CRB2Q5IJ48 1285 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 KIAA1324Q6UXG2 1013 aaKnown RBP10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 ARMCX6Q7L4S7 300 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 LAS2Q8IYD9 372 aa10.48□□□□□ -0.73
SH3RF1-203ENST00000508685 LINC01555Q8NAE3 123 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms