RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 SNRPNP63162 240 aaKnown RBP13.77□□□□□ -0.2
DDX41-208ENST00000507955 RPA4Q13156 261 aa13.77□□□□□ -0.2
DDX41-208ENST00000507955 INAQ16352 499 aa13.77□□□□□ -0.2
DDX41-208ENST00000507955 ZNF793Q6ZN11 406 aa13.77□□□□□ -0.2
DDX41-208ENST00000507955 TSPYL5Q86VY4 417 aaPredicted RBP13.77□□□□□ -0.2
DDX41-208ENST00000507955 OXR1Q8N573 874 aa13.77□□□□□ -0.2
DDX41-208ENST00000507955 TP53I13Q8NBR0 393 aaPredicted RBP13.77□□□□□ -0.2
DDX41-208ENST00000507955 SETD9Q8NE22 299 aa13.77□□□□□ -0.2
DDX41-208ENST00000507955 OR2A1Q8NGT9 310 aa13.77□□□□□ -0.2
DDX41-208ENST00000507955 UTP15Q8TED0 518 aaKnown RBP13.77□□□□□ -0.2
DDX41-208ENST00000507955 FCRL4Q96PJ5 515 aa13.77□□□□□ -0.2
DDX41-208ENST00000507955 APOL4Q9BPW4 351 aa13.77□□□□□ -0.2
DDX41-208ENST00000507955 YIPF4Q9BSR8 244 aa13.77□□□□□ -0.2
DDX41-208ENST00000507955 NLNQ9BYT8 704 aa13.77□□□□□ -0.2
DDX41-208ENST00000507955 NKX2-4Q9H2Z4 354 aa13.77□□□□□ -0.2
DDX41-208ENST00000507955 TMEM165Q9HC07 324 aa13.77□□□□□ -0.2
DDX41-208ENST00000507955 SPHK1Q9NYA1 384 aa13.77□□□□□ -0.2
DDX41-208ENST00000507955 H0Y8X5 98 aa13.77□□□□□ -0.21
DDX41-208ENST00000507955 KPNA4O00629 521 aaPredicted RBP13.77□□□□□ -0.21
DDX41-208ENST00000507955 APODP05090 189 aa13.77□□□□□ -0.21
DDX41-208ENST00000507955 CEACAM5P06731 702 aa13.77□□□□□ -0.21
DDX41-208ENST00000507955 POU2F2P09086 479 aa13.77□□□□□ -0.21
DDX41-208ENST00000507955 LIM2P55344 173 aa13.77□□□□□ -0.21
DDX41-208ENST00000507955 CLDN2P57739 230 aa13.77□□□□□ -0.21
DDX41-208ENST00000507955 DLX2Q07687 328 aaPredicted RBP13.77□□□□□ -0.21
DDX41-208ENST00000507955 KRT33BQ14525 404 aa13.77□□□□□ -0.21
DDX41-208ENST00000507955 RD3Q7Z3Z2 195 aa13.77□□□□□ -0.21
DDX41-208ENST00000507955 CADM3Q8N126 398 aa13.77□□□□□ -0.21
DDX41-208ENST00000507955 OR6Q1Q8NGQ2 317 aa13.77□□□□□ -0.21
DDX41-208ENST00000507955 SMPDL3AQ92484 453 aa13.77□□□□□ -0.21
DDX41-208ENST00000507955 CAMK1GQ96NX5 476 aa13.77□□□□□ -0.21
DDX41-208ENST00000507955 WDR12Q9GZL7 423 aaKnown RBP13.77□□□□□ -0.21
DDX41-208ENST00000507955 EPS8L2Q9H6S3 715 aa13.77□□□□□ -0.21
DDX41-208ENST00000507955 NECTIN3Q9NQS3 549 aa13.77□□□□□ -0.21
DDX41-208ENST00000507955 POLE4Q9NR33 117 aa13.77□□□□□ -0.21
DDX41-208ENST00000507955 ACER3Q9NUN7 267 aa13.77□□□□□ -0.21
DDX41-208ENST00000507955 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.77□□□□□ -0.21
DDX41-208ENST00000507955 TPRKBQ9Y3C4 175 aa13.77□□□□□ -0.21
DDX41-208ENST00000507955 TBC1D3DA0A087WVF3 549 aa13.77□□□□□ -0.21
DDX41-208ENST00000507955 TBC1D3IA0A087WXS9 549 aa13.77□□□□□ -0.21
DDX41-208ENST00000507955 TBC1D3EA0A087X179 549 aa13.77□□□□□ -0.21
DDX41-208ENST00000507955 TBC1D3KA0A087X1G2 549 aa13.77□□□□□ -0.21
DDX41-208ENST00000507955 TBC1D3FA6NER0 549 aaPredicted RBP13.77□□□□□ -0.21
DDX41-208ENST00000507955 TBC1D3LB9A6J9 549 aa13.77□□□□□ -0.21
DDX41-208ENST00000507955 EML2O95834 649 aa13.77□□□□□ -0.21
DDX41-208ENST00000507955 TBC1D3HP0C7X1 549 aa13.77□□□□□ -0.21
DDX41-208ENST00000507955 C8orf89P0DMQ9 161 aa13.77□□□□□ -0.21
DDX41-208ENST00000507955 TRIM23P36406 574 aa13.77□□□□□ -0.21
DDX41-208ENST00000507955 RPS3AP61247 264 aaKnown RBP13.77□□□□□ -0.21
DDX41-208ENST00000507955 INAVAQ3KP66 663 aa13.77□□□□□ -0.21
DDX41-208ENST00000507955 LEXMQ3ZCV2 418 aa13.77□□□□□ -0.21
DDX41-208ENST00000507955 SPDYE7PQ495Y7 208 aa13.77□□□□□ -0.21
DDX41-208ENST00000507955 TBC1D3GQ6DHY5 549 aa13.77□□□□□ -0.21
DDX41-208ENST00000507955 TBC1D3CQ6IPX1 549 aa13.77□□□□□ -0.21
DDX41-208ENST00000507955 TBC1D3Q8IZP1 549 aaPredicted RBP13.77□□□□□ -0.21
DDX41-208ENST00000507955 FBXL6Q8N531 539 aa13.77□□□□□ -0.21
DDX41-208ENST00000507955 TMEM145Q8NBT3 493 aa13.77□□□□□ -0.21
DDX41-208ENST00000507955 VANGL1Q8TAA9 524 aaPredicted RBP13.77□□□□□ -0.21
DDX41-208ENST00000507955 SIGLEC11Q96RL6 698 aa13.77□□□□□ -0.21
DDX41-208ENST00000507955 SPATA9Q9BWV2 254 aa13.77□□□□□ -0.21
DDX41-208ENST00000507955 SLIRPQ9GZT3 109 aaKnown RBP13.77□□□□□ -0.21
DDX41-208ENST00000507955 RHBGQ9H310 441 aa13.77□□□□□ -0.21
DDX41-208ENST00000507955 SERHL2Q9H4I8 314 aa13.77□□□□□ -0.21
DDX41-208ENST00000507955 TMEM38AQ9H6F2 299 aa13.77□□□□□ -0.21
DDX41-208ENST00000507955 FBXO8Q9NRD0 319 aa13.77□□□□□ -0.21
DDX41-208ENST00000507955 SIRT3Q9NTG7 399 aaPredicted RBP13.77□□□□□ -0.21
DDX41-208ENST00000507955 MAPRE3Q9UPY8 281 aa13.77□□□□□ -0.21
DDX41-208ENST00000507955 DENND4AQ7Z401 1863 aa13.76□□□□□ -0.21
DDX41-208ENST00000507955 PRAMEF27A3QJZ7 478 aa13.76□□□□□ -0.21
DDX41-208ENST00000507955 FFAR1O14842 300 aa13.76□□□□□ -0.21
DDX41-208ENST00000507955 CAPN5O15484 640 aaPredicted RBP13.76□□□□□ -0.21
DDX41-208ENST00000507955 PDPK1O15530 556 aa13.76□□□□□ -0.21
DDX41-208ENST00000507955 NDUFS4O43181 175 aa13.76□□□□□ -0.21
DDX41-208ENST00000507955 IGFBP1P08833 259 aaPredicted RBP13.76□□□□□ -0.21
DDX41-208ENST00000507955 ARAFP10398 606 aa13.76□□□□□ -0.21
DDX41-208ENST00000507955 TGM1P22735 817 aa13.76□□□□□ -0.21
DDX41-208ENST00000507955 MAGEA8P43361 318 aa13.76□□□□□ -0.21
DDX41-208ENST00000507955 PRKAG1P54619 331 aa13.76□□□□□ -0.21
DDX41-208ENST00000507955 PCBP3P57721 371 aaKnown RBP13.76□□□□□ -0.21
DDX41-208ENST00000507955 TFF2Q03403 129 aa13.76□□□□□ -0.21
DDX41-208ENST00000507955 FADDQ13158 208 aa13.76□□□□□ -0.21
DDX41-208ENST00000507955 SGCGQ13326 291 aa13.76□□□□□ -0.21
DDX41-208ENST00000507955 MAPK11Q15759 364 aa13.76□□□□□ -0.21
DDX41-208ENST00000507955 KLHL17Q6TDP4 642 aa13.76□□□□□ -0.21
DDX41-208ENST00000507955 C6orf120Q7Z4R8 191 aa13.76□□□□□ -0.21
DDX41-208ENST00000507955 OR4C15Q8NGM1 316 aa13.76□□□□□ -0.21
DDX41-208ENST00000507955 TMEM19Q96HH6 336 aa13.76□□□□□ -0.21
DDX41-208ENST00000507955 TRPV4Q9HBA0 871 aa13.76□□□□□ -0.21
DDX41-208ENST00000507955 WASH6PQ9NQA3 447 aa13.76□□□□□ -0.21
DDX41-208ENST00000507955 POM121BA6NF01 834 aa13.76□□□□□ -0.21
DDX41-208ENST00000507955 RGS10O43665 173 aa13.76□□□□□ -0.21
DDX41-208ENST00000507955 TPST2O60704 377 aa13.76□□□□□ -0.21
DDX41-208ENST00000507955 UQCRC2P22695 453 aa13.76□□□□□ -0.21
DDX41-208ENST00000507955 IGFALSP35858 605 aa13.76□□□□□ -0.21
DDX41-208ENST00000507955 BCL6P41182 706 aa13.76□□□□□ -0.21
DDX41-208ENST00000507955 CXCR4P61073 352 aa13.76□□□□□ -0.21
DDX41-208ENST00000507955 PPP2CBP62714 309 aa13.76□□□□□ -0.21
DDX41-208ENST00000507955 PPP2CAP67775 309 aa13.76□□□□□ -0.21
DDX41-208ENST00000507955 REEP5Q00765 189 aa13.76□□□□□ -0.21
DDX41-208ENST00000507955 SYPL1Q16563 259 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms