RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 NSG1P42857 185 aa6.78□□□□□ -1.32
CLCN3-206ENST00000507875 PSMD7P51665 324 aa6.78□□□□□ -1.32
CLCN3-206ENST00000507875 LUMP51884 338 aaPredicted RBP6.78□□□□□ -1.32
CLCN3-206ENST00000507875 RAD23AP54725 363 aa6.78□□□□□ -1.32
CLCN3-206ENST00000507875 ABCE1P61221 599 aaKnown RBP6.78□□□□□ -1.32
CLCN3-206ENST00000507875 DUSP2Q05923 314 aa6.78□□□□□ -1.32
CLCN3-206ENST00000507875 FAM83EQ2M2I3 478 aa6.78□□□□□ -1.32
CLCN3-206ENST00000507875 ZRANB3Q5FWF4 1079 aa6.78□□□□□ -1.32
CLCN3-206ENST00000507875 INO80CQ6PI98 192 aaPredicted RBP6.78□□□□□ -1.32
CLCN3-206ENST00000507875 MACC1Q6ZN28 852 aa6.78□□□□□ -1.32
CLCN3-206ENST00000507875 DENND6AQ8IWF6 608 aa6.78□□□□□ -1.32
CLCN3-206ENST00000507875 ACVR1CQ8NER5 493 aa6.78□□□□□ -1.32
CLCN3-206ENST00000507875 CXorf40AQ8TE69 158 aa6.78□□□□□ -1.32
CLCN3-206ENST00000507875 PPP4R1Q8TF05 950 aa6.78□□□□□ -1.32
CLCN3-206ENST00000507875 SORT1Q99523 831 aa6.78□□□□□ -1.32
CLCN3-206ENST00000507875 COQ7Q99807 217 aa6.78□□□□□ -1.32
CLCN3-206ENST00000507875 OMDQ99983 421 aa6.78□□□□□ -1.32
CLCN3-206ENST00000507875 SRSF8Q9BRL6 282 aaKnown RBP6.78□□□□□ -1.32
CLCN3-206ENST00000507875 C9orf16Q9BUW7 83 aa6.78□□□□□ -1.32
CLCN3-206ENST00000507875 SSBP4Q9BWG4 385 aaPredicted RBP6.78□□□□□ -1.32
CLCN3-206ENST00000507875 C1QTNF7Q9BXJ2 289 aa6.78□□□□□ -1.32
CLCN3-206ENST00000507875 CADM1Q9BY67 442 aaKnown RBP6.78□□□□□ -1.32
CLCN3-206ENST00000507875 ASB8Q9H765 288 aa6.78□□□□□ -1.32
CLCN3-206ENST00000507875 CXorf36Q9H7Y0 433 aa6.78□□□□□ -1.32
CLCN3-206ENST00000507875 IL26Q9NPH9 171 aa6.78□□□□□ -1.32
CLCN3-206ENST00000507875 DLL4Q9NR61 685 aa6.78□□□□□ -1.32
CLCN3-206ENST00000507875 CRLS1Q9UJA2 301 aa6.78□□□□□ -1.32
CLCN3-206ENST00000507875 PAIP2BQ9ULR5 123 aaKnown RBP6.78□□□□□ -1.32
CLCN3-206ENST00000507875 CA14Q9ULX7 337 aa6.78□□□□□ -1.32
CLCN3-206ENST00000507875 MMP17Q9ULZ9 603 aa6.78□□□□□ -1.32
CLCN3-206ENST00000507875 TRIOO75962 3097 aa6.78□□□□□ -1.32
CLCN3-206ENST00000507875 XKRY2A2RUG3 117 aa6.77□□□□□ -1.32
CLCN3-206ENST00000507875 G3V2L1 256 aa6.77□□□□□ -1.32
CLCN3-206ENST00000507875 GYG2O15488 501 aa6.77□□□□□ -1.32
CLCN3-206ENST00000507875 GSC2O15499 205 aa6.77□□□□□ -1.32
CLCN3-206ENST00000507875 MAGEC1O60732 1142 aa6.77□□□□□ -1.32
CLCN3-206ENST00000507875 ELFN1P0C7U0 828 aa6.77□□□□□ -1.32
CLCN3-206ENST00000507875 PIRTP0C851 137 aa6.77□□□□□ -1.32
CLCN3-206ENST00000507875 LHCGRP22888 699 aa6.77□□□□□ -1.32
CLCN3-206ENST00000507875 GKP32189 559 aa6.77□□□□□ -1.32
CLCN3-206ENST00000507875 BMI1P35226 326 aa6.77□□□□□ -1.32
CLCN3-206ENST00000507875 RPS14P62263 151 aaKnown RBP6.77□□□□□ -1.32
CLCN3-206ENST00000507875 PON2Q15165 354 aa6.77□□□□□ -1.32
CLCN3-206ENST00000507875 MOGQ16653 247 aa6.77□□□□□ -1.32
CLCN3-206ENST00000507875 HENMT1Q5T8I9 393 aaKnown RBP6.77□□□□□ -1.32
CLCN3-206ENST00000507875 ATG14Q6ZNE5 492 aa6.77□□□□□ -1.32
CLCN3-206ENST00000507875 DDHD1Q8NEL9 900 aa6.77□□□□□ -1.32
CLCN3-206ENST00000507875 RHEBL1Q8TAI7 183 aa6.77□□□□□ -1.32
CLCN3-206ENST00000507875 RNFT2Q96EX2 444 aa6.77□□□□□ -1.32
CLCN3-206ENST00000507875 DTD2Q96FN9 168 aa6.77□□□□□ -1.32
CLCN3-206ENST00000507875 ZNF514Q96K75 400 aaPredicted RBP6.77□□□□□ -1.32
CLCN3-206ENST00000507875 HRASLS5Q96KN8 279 aa6.77□□□□□ -1.32
CLCN3-206ENST00000507875 RILPQ96NA2 401 aa6.77□□□□□ -1.32
CLCN3-206ENST00000507875 MRPL57Q9BQC6 102 aaKnown RBP6.77□□□□□ -1.32
CLCN3-206ENST00000507875 EBF4Q9BQW3 602 aa6.77□□□□□ -1.32
CLCN3-206ENST00000507875 SPXQ9BT56 116 aa6.77□□□□□ -1.32
CLCN3-206ENST00000507875 FAM96AQ9H5X1 160 aa6.77□□□□□ -1.32
CLCN3-206ENST00000507875 SERINC1Q9NRX5 453 aa6.77□□□□□ -1.32
CLCN3-206ENST00000507875 TAS2R1Q9NYW7 299 aa6.77□□□□□ -1.32
CLCN3-206ENST00000507875 CNOT11Q9UKZ1 510 aaKnown RBP6.77□□□□□ -1.32
CLCN3-206ENST00000507875 FADS3Q9Y5Q0 445 aa6.77□□□□□ -1.32
CLCN3-206ENST00000507875 OAS3Q9Y6K5 1087 aaKnown RBP6.77□□□□□ -1.32
CLCN3-206ENST00000507875 COMMD3-BMI1R4GMX3 469 aa6.77□□□□□ -1.32
CLCN3-206ENST00000507875 TECTAO75443 2155 aa6.77□□□□□ -1.33
CLCN3-206ENST00000507875 GAPDHSO14556 408 aaPredicted RBP6.77□□□□□ -1.33
CLCN3-206ENST00000507875 DIRAS3O95661 229 aa6.77□□□□□ -1.33
CLCN3-206ENST00000507875 EGFP01133 1207 aa6.77□□□□□ -1.33
CLCN3-206ENST00000507875 HOXC4P09017 264 aaPredicted RBP6.77□□□□□ -1.33
CLCN3-206ENST00000507875 OR56A5P0C7T3 313 aa6.77□□□□□ -1.33
CLCN3-206ENST00000507875 HOXB2P14652 356 aa6.77□□□□□ -1.33
CLCN3-206ENST00000507875 AOC1P19801 751 aa6.77□□□□□ -1.33
CLCN3-206ENST00000507875 TUBG1P23258 451 aa6.77□□□□□ -1.33
CLCN3-206ENST00000507875 CFL1P23528 166 aaKnown RBP6.77□□□□□ -1.33
CLCN3-206ENST00000507875 ARRB2P32121 409 aa6.77□□□□□ -1.33
CLCN3-206ENST00000507875 KIR2DL3P43628 341 aa6.77□□□□□ -1.33
CLCN3-206ENST00000507875 VBP1P61758 197 aa6.77□□□□□ -1.33
CLCN3-206ENST00000507875 PHEXP78562 749 aa6.77□□□□□ -1.33
CLCN3-206ENST00000507875 NHLH1Q02575 133 aa6.77□□□□□ -1.33
CLCN3-206ENST00000507875 SF3B4Q15427 424 aaKnown RBP eCLIP6.77□□□□□ -1.339e-6■■□□□ 14.4
CLCN3-206ENST00000507875 AANATQ16613 207 aa6.77□□□□□ -1.33
CLCN3-206ENST00000507875 TTLL9Q3SXZ7 439 aa6.77□□□□□ -1.33
CLCN3-206ENST00000507875 CDKL4Q5MAI5 379 aa6.77□□□□□ -1.33
CLCN3-206ENST00000507875 WASHC2DQ5SRD0 308 aa6.77□□□□□ -1.33
CLCN3-206ENST00000507875 TTC23LQ6PF05 361 aa6.77□□□□□ -1.33
CLCN3-206ENST00000507875 SLC30A9Q6PML9 568 aa6.77□□□□□ -1.33
CLCN3-206ENST00000507875 PTCHD4Q6ZW05 846 aa6.77□□□□□ -1.33
CLCN3-206ENST00000507875 TAS2R42Q7RTR8 314 aa6.77□□□□□ -1.33
CLCN3-206ENST00000507875 SERPINA9Q86WD7 417 aa6.77□□□□□ -1.33
CLCN3-206ENST00000507875 SLC43A2Q8N370 569 aa6.77□□□□□ -1.33
CLCN3-206ENST00000507875 IL17RCQ8NAC3 791 aa6.77□□□□□ -1.33
CLCN3-206ENST00000507875 GPR26Q8NDV2 337 aa6.77□□□□□ -1.33
CLCN3-206ENST00000507875 OR8K3Q8NH51 312 aa6.77□□□□□ -1.33
CLCN3-206ENST00000507875 RSC1A1Q92681 617 aa6.77□□□□□ -1.33
CLCN3-206ENST00000507875 SIPA1Q96FS4 1042 aa6.77□□□□□ -1.33
CLCN3-206ENST00000507875 COPS8Q99627 209 aa6.77□□□□□ -1.33
CLCN3-206ENST00000507875 DENND2DQ9H6A0 471 aaPredicted RBP6.77□□□□□ -1.33
CLCN3-206ENST00000507875 EBF2Q9HAK2 575 aa6.77□□□□□ -1.33
CLCN3-206ENST00000507875 TUBG2Q9NRH3 451 aa6.77□□□□□ -1.33
CLCN3-206ENST00000507875 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.77□□□□□ -1.33
CLCN3-206ENST00000507875 MARCH4Q9P2E8 410 aaPredicted RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms