RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 COPS7AQ9UBW8 275 aa10.68□□□□□ -0.7
HMGCS1-204ENST00000507293 F8P00451 2351 aa10.68□□□□□ -0.7
HMGCS1-204ENST00000507293 EXPH5Q8NEV8 1989 aa10.68□□□□□ -0.7
HMGCS1-204ENST00000507293 PRKRAO75569 313 aaKnown RBP10.67□□□□□ -0.7
HMGCS1-204ENST00000507293 TOXO94900 526 aa10.67□□□□□ -0.7
HMGCS1-204ENST00000507293 IGHG3P01860 377 aa10.67□□□□□ -0.7
HMGCS1-204ENST00000507293 P04436 131 aa10.67□□□□□ -0.7
HMGCS1-204ENST00000507293 CELA3AP09093 270 aa10.67□□□□□ -0.7
HMGCS1-204ENST00000507293 LTA4HP09960 611 aaKnown RBP10.67□□□□□ -0.7
HMGCS1-204ENST00000507293 IGFBP2P18065 325 aa10.67□□□□□ -0.7
HMGCS1-204ENST00000507293 CAPN3P20807 821 aa10.67□□□□□ -0.7
HMGCS1-204ENST00000507293 MAGEA5P43359 124 aa10.67□□□□□ -0.7
HMGCS1-204ENST00000507293 STT3AP46977 705 aa10.67□□□□□ -0.7
HMGCS1-204ENST00000507293 RAP1GDS1P52306 607 aa10.67□□□□□ -0.7
HMGCS1-204ENST00000507293 IGLV3-21P80748 117 aaPredicted RBP10.67□□□□□ -0.7
HMGCS1-204ENST00000507293 TNFRSF17Q02223 184 aa10.67□□□□□ -0.7
HMGCS1-204ENST00000507293 PMPCAQ10713 525 aa10.67□□□□□ -0.7
HMGCS1-204ENST00000507293 ASPHQ12797 758 aa10.67□□□□□ -0.7
HMGCS1-204ENST00000507293 SLAMF1Q13291 335 aa10.67□□□□□ -0.7
HMGCS1-204ENST00000507293 GXYLT1Q4G148 440 aa10.67□□□□□ -0.7
HMGCS1-204ENST00000507293 OR4C11Q6IEV9 310 aa10.67□□□□□ -0.7
HMGCS1-204ENST00000507293 GRHL2Q6ISB3 625 aa10.67□□□□□ -0.7
HMGCS1-204ENST00000507293 DGAT2L6Q6ZPD8 337 aa10.67□□□□□ -0.7
HMGCS1-204ENST00000507293 TRILQ7L0X0 811 aa10.67□□□□□ -0.7
HMGCS1-204ENST00000507293 MYLK4Q86YV6 388 aaPredicted RBP10.67□□□□□ -0.7
HMGCS1-204ENST00000507293 SPATA4Q8NEY3 305 aa10.67□□□□□ -0.7
HMGCS1-204ENST00000507293 FBF1Q8TES7 1133 aa10.67□□□□□ -0.7
HMGCS1-204ENST00000507293 DOK4Q8TEW6 326 aa10.67□□□□□ -0.7
HMGCS1-204ENST00000507293 KCTD4Q8WVF5 259 aa10.67□□□□□ -0.7
HMGCS1-204ENST00000507293 ANP32BQ92688 251 aaKnown RBP10.67□□□□□ -0.7
HMGCS1-204ENST00000507293 NXNL1Q96CM4 212 aa10.67□□□□□ -0.7
HMGCS1-204ENST00000507293 SGCZQ96LD1 299 aa10.67□□□□□ -0.7
HMGCS1-204ENST00000507293 IL1RL2Q9HB29 575 aa10.67□□□□□ -0.7
HMGCS1-204ENST00000507293 KCNJ16Q9NPI9 418 aa10.67□□□□□ -0.7
HMGCS1-204ENST00000507293 TUBA8Q9NY65 449 aaPredicted RBP10.67□□□□□ -0.7
HMGCS1-204ENST00000507293 ATG4BQ9Y4P1 393 aa10.67□□□□□ -0.7
HMGCS1-204ENST00000507293 ANKRD17O75179 2603 aaKnown RBP10.66□□□□□ -0.7
HMGCS1-204ENST00000507293 POLQO75417 2590 aa10.66□□□□□ -0.7
HMGCS1-204ENST00000507293 A0A1B0GVC2 190 aa10.66□□□□□ -0.7
HMGCS1-204ENST00000507293 ATP6AP2A0A1C7CYW4 349 aa10.66□□□□□ -0.7
HMGCS1-204ENST00000507293 OR14I1A6ND48 311 aa10.66□□□□□ -0.7
HMGCS1-204ENST00000507293 FIGNL2A6NMB9 653 aa10.66□□□□□ -0.7
HMGCS1-204ENST00000507293 HRKO00198 91 aa10.66□□□□□ -0.7
HMGCS1-204ENST00000507293 BCKDKO14874 412 aa10.66□□□□□ -0.7
HMGCS1-204ENST00000507293 ATP6AP2O75787 350 aa10.66□□□□□ -0.7
HMGCS1-204ENST00000507293 NADKO95544 446 aaPredicted RBP10.66□□□□□ -0.7
HMGCS1-204ENST00000507293 IGKV3-11P04433 115 aa10.66□□□□□ -0.7
HMGCS1-204ENST00000507293 EPB42P16452 691 aa10.66□□□□□ -0.7
HMGCS1-204ENST00000507293 ACVR2AP27037 513 aa10.66□□□□□ -0.7
HMGCS1-204ENST00000507293 MSX1P28360 303 aa10.66□□□□□ -0.7
HMGCS1-204ENST00000507293 CRABP2P29373 138 aa10.66□□□□□ -0.7
HMGCS1-204ENST00000507293 STX2P32856 288 aa10.66□□□□□ -0.7
HMGCS1-204ENST00000507293 PIGAP37287 484 aa10.66□□□□□ -0.7
HMGCS1-204ENST00000507293 MAGEA4P43358 317 aa10.66□□□□□ -0.7
HMGCS1-204ENST00000507293 PLTPP55058 493 aa10.66□□□□□ -0.7
HMGCS1-204ENST00000507293 HNRNPH2P55795 449 aaKnown RBP10.66□□□□□ -0.7
HMGCS1-204ENST00000507293 PLIN5Q00G26 463 aa10.66□□□□□ -0.7
HMGCS1-204ENST00000507293 FOLH1Q04609 750 aa10.66□□□□□ -0.7
HMGCS1-204ENST00000507293 TFF3Q07654 80 aa10.66□□□□□ -0.7
HMGCS1-204ENST00000507293 PCDH1Q08174 1060 aa10.66□□□□□ -0.7
HMGCS1-204ENST00000507293 FOXO1Q12778 655 aa10.66□□□□□ -0.7
HMGCS1-204ENST00000507293 MPEG1Q2M385 716 aa10.66□□□□□ -0.7
HMGCS1-204ENST00000507293 PIGGQ5H8A4 983 aa10.66□□□□□ -0.7
HMGCS1-204ENST00000507293 DEPDC1Q5TB30 811 aa10.66□□□□□ -0.7
HMGCS1-204ENST00000507293 C18orf63Q68DL7 685 aa10.66□□□□□ -0.7
HMGCS1-204ENST00000507293 ZNF585AQ6P3V2 769 aa10.66□□□□□ -0.7
HMGCS1-204ENST00000507293 ACAD11Q709F0 780 aa10.66□□□□□ -0.7
HMGCS1-204ENST00000507293 C9orf40Q8IXQ3 194 aa10.66□□□□□ -0.7
HMGCS1-204ENST00000507293 TEX9Q8N6V9 391 aa10.66□□□□□ -0.7
HMGCS1-204ENST00000507293 HUS1BQ8NHY5 278 aa10.66□□□□□ -0.7
HMGCS1-204ENST00000507293 NUBPLQ8TB37 319 aa10.66□□□□□ -0.7
HMGCS1-204ENST00000507293 SLC22A8Q8TCC7 542 aa10.66□□□□□ -0.7
HMGCS1-204ENST00000507293 FBXO25Q8TCJ0 367 aa10.66□□□□□ -0.7
HMGCS1-204ENST00000507293 RGMAQ96B86 450 aa10.66□□□□□ -0.7
HMGCS1-204ENST00000507293 PPWD1Q96BP3 646 aaKnown RBP10.66□□□□□ -0.7
HMGCS1-204ENST00000507293 SENP5Q96HI0 755 aaPredicted RBP10.66□□□□□ -0.7
HMGCS1-204ENST00000507293 CNPPD1Q9BV87 410 aa10.66□□□□□ -0.7
HMGCS1-204ENST00000507293 RPF2Q9H7B2 306 aaKnown RBP10.66□□□□□ -0.7
HMGCS1-204ENST00000507293 SEMA4BQ9NPR2 832 aaPredicted RBP10.66□□□□□ -0.7
HMGCS1-204ENST00000507293 DMRT3Q9NQL9 472 aa10.66□□□□□ -0.7
HMGCS1-204ENST00000507293 TNFRSF10DQ9UBN6 386 aa10.66□□□□□ -0.7
HMGCS1-204ENST00000507293 ADGRE2Q9UHX3 823 aa10.66□□□□□ -0.7
HMGCS1-204ENST00000507293 PHF11Q9UIL8 331 aa10.66□□□□□ -0.7
HMGCS1-204ENST00000507293 ANGPTL3Q9Y5C1 460 aa10.66□□□□□ -0.7
HMGCS1-204ENST00000507293 FAM215AQ9Y5M1 114 aa10.66□□□□□ -0.7
HMGCS1-204ENST00000507293 FREM3P0C091 2139 aa10.66□□□□□ -0.7
HMGCS1-204ENST00000507293 NINQ8N4C6 2090 aa10.65□□□□□ -0.7
HMGCS1-204ENST00000507293 SYCE1LA8MT33 242 aa10.65□□□□□ -0.7
HMGCS1-204ENST00000507293 FOXO6A8MYZ6 492 aa10.65□□□□□ -0.7
HMGCS1-204ENST00000507293 PLPP1O14494 284 aa10.65□□□□□ -0.7
HMGCS1-204ENST00000507293 AQP7O14520 342 aa10.65□□□□□ -0.7
HMGCS1-204ENST00000507293 DYRK3O43781 588 aa10.65□□□□□ -0.7
HMGCS1-204ENST00000507293 MTHFD2P13995 350 aa10.65□□□□□ -0.7
HMGCS1-204ENST00000507293 ALOX15P16050 662 aaPredicted RBP10.65□□□□□ -0.7
HMGCS1-204ENST00000507293 PIK3CBP42338 1070 aa10.65□□□□□ -0.7
HMGCS1-204ENST00000507293 MAN2A2P49641 1150 aa10.65□□□□□ -0.7
HMGCS1-204ENST00000507293 RPS13P62277 151 aaKnown RBP10.65□□□□□ -0.7
HMGCS1-204ENST00000507293 HERVK_113P63132 956 aa10.65□□□□□ -0.7
HMGCS1-204ENST00000507293 ERVK-8P63133 956 aa10.65□□□□□ -0.7
HMGCS1-204ENST00000507293 IRF9Q00978 393 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms