RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 MDGA2Q7Z553 956 aa13.38□□□□□ -0.27
HMGCS1-203ENST00000507004 NUDT13Q86X67 352 aa13.38□□□□□ -0.27
HMGCS1-203ENST00000507004 CHERPQ8IWX8 916 aaKnown RBP13.38□□□□□ -0.27
HMGCS1-203ENST00000507004 L3MBTL4Q8NA19 623 aa13.38□□□□□ -0.27
HMGCS1-203ENST00000507004 OR2M7Q8NG81 312 aa13.38□□□□□ -0.27
HMGCS1-203ENST00000507004 CA5BP1Q8WTZ4 195 aa13.38□□□□□ -0.27
HMGCS1-203ENST00000507004 ANKRD9Q96BM1 317 aaPredicted RBP13.38□□□□□ -0.27
HMGCS1-203ENST00000507004 FBXL20Q96IG2 436 aa13.38□□□□□ -0.27
HMGCS1-203ENST00000507004 PHF12Q96QT6 1004 aa13.38□□□□□ -0.27
HMGCS1-203ENST00000507004 SERPINI1Q99574 410 aa13.38□□□□□ -0.27
HMGCS1-203ENST00000507004 SPOCK3Q9BQ16 436 aa13.38□□□□□ -0.27
HMGCS1-203ENST00000507004 OR51B5Q9H339 312 aa13.38□□□□□ -0.27
HMGCS1-203ENST00000507004 IL1RL2Q9HB29 575 aa13.38□□□□□ -0.27
HMGCS1-203ENST00000507004 SACM1LQ9NTJ5 587 aa13.38□□□□□ -0.27
HMGCS1-203ENST00000507004 ZDHHC18Q9NUE0 388 aa13.38□□□□□ -0.27
HMGCS1-203ENST00000507004 AHSPQ9NZD4 102 aa13.38□□□□□ -0.27
HMGCS1-203ENST00000507004 PKDREJQ9NTG1 2253 aa13.37□□□□□ -0.27
HMGCS1-203ENST00000507004 TEX15Q9BXT5 2789 aa13.37□□□□□ -0.27
HMGCS1-203ENST00000507004 A0A1B0GTH9 108 aa13.37□□□□□ -0.27
HMGCS1-203ENST00000507004 TMEM200CA6NKL6 621 aa13.37□□□□□ -0.27
HMGCS1-203ENST00000507004 OR6C76A6NM76 312 aa13.37□□□□□ -0.27
HMGCS1-203ENST00000507004 STX16-NPEPL1H3BU86 382 aa13.37□□□□□ -0.27
HMGCS1-203ENST00000507004 WWP2O00308 870 aa13.37□□□□□ -0.27
HMGCS1-203ENST00000507004 RTCAO00442 366 aaKnown RBP13.37□□□□□ -0.27
HMGCS1-203ENST00000507004 STX16O14662 325 aa13.37□□□□□ -0.27
HMGCS1-203ENST00000507004 BCKDKO14874 412 aa13.37□□□□□ -0.27
HMGCS1-203ENST00000507004 CDC40O60508 579 aaKnown RBP eCLIP13.37□□□□□ -0.27
HMGCS1-203ENST00000507004 KRT38O76015 456 aa13.37□□□□□ -0.27
HMGCS1-203ENST00000507004 OR6B1O95007 311 aa13.37□□□□□ -0.27
HMGCS1-203ENST00000507004 CLDN9O95484 217 aa13.37□□□□□ -0.27
HMGCS1-203ENST00000507004 ALOX15P16050 662 aaPredicted RBP13.37□□□□□ -0.27
HMGCS1-203ENST00000507004 PTGER1P34995 402 aa13.37□□□□□ -0.27
HMGCS1-203ENST00000507004 SOX3P41225 446 aa13.37□□□□□ -0.27
HMGCS1-203ENST00000507004 ST13P50502 369 aaKnown RBP13.37□□□□□ -0.27
HMGCS1-203ENST00000507004 PPIAP62937 165 aaKnown RBP13.37□□□□□ -0.27
HMGCS1-203ENST00000507004 UAP1Q16222 522 aaPredicted RBP13.37□□□□□ -0.27
HMGCS1-203ENST00000507004 HYAL4Q2M3T9 481 aa13.37□□□□□ -0.27
HMGCS1-203ENST00000507004 SPRED3Q2MJR0 410 aa13.37□□□□□ -0.27
HMGCS1-203ENST00000507004 GLE1Q53GS7 698 aaKnown RBP13.37□□□□□ -0.27
HMGCS1-203ENST00000507004 PIGGQ5H8A4 983 aa13.37□□□□□ -0.27
HMGCS1-203ENST00000507004 CYP20A1Q6UW02 462 aa13.37□□□□□ -0.27
HMGCS1-203ENST00000507004 ACAD11Q709F0 780 aa13.37□□□□□ -0.27
HMGCS1-203ENST00000507004 SLC29A4Q7RTT9 530 aa13.37□□□□□ -0.27
HMGCS1-203ENST00000507004 FAM109AQ8N4B1 249 aa13.37□□□□□ -0.27
HMGCS1-203ENST00000507004 ZNF721Q8TF20 911 aa13.37□□□□□ -0.27
HMGCS1-203ENST00000507004 ATP6V1E2Q96A05 226 aa13.37□□□□□ -0.27
HMGCS1-203ENST00000507004 SENP5Q96HI0 755 aaPredicted RBP13.37□□□□□ -0.27
HMGCS1-203ENST00000507004 DDX31Q9H8H2 851 aaKnown RBP13.37□□□□□ -0.27
HMGCS1-203ENST00000507004 IPPKQ9H8X2 491 aa13.37□□□□□ -0.27
HMGCS1-203ENST00000507004 ZDHHC11Q9H8X9 412 aa13.37□□□□□ -0.27
HMGCS1-203ENST00000507004 SLC24A3Q9HC58 644 aa13.37□□□□□ -0.27
HMGCS1-203ENST00000507004 UTP20O75691 2785 aaKnown RBP13.37□□□□□ -0.27
HMGCS1-203ENST00000507004 IQANK1A0A1B0GTG1 560 aa13.36□□□□□ -0.27
HMGCS1-203ENST00000507004 FIGNL2A6NMB9 653 aa13.36□□□□□ -0.27
HMGCS1-203ENST00000507004 CAPN14A8MX76 684 aa13.36□□□□□ -0.27
HMGCS1-203ENST00000507004 FAM47E-STBD1D6RA91 191 aa13.36□□□□□ -0.27
HMGCS1-203ENST00000507004 PLPP1O14494 284 aa13.36□□□□□ -0.27
HMGCS1-203ENST00000507004 FGF17O60258 216 aa13.36□□□□□ -0.27
HMGCS1-203ENST00000507004 PRKNO60260 465 aaPredicted RBP13.36□□□□□ -0.27
HMGCS1-203ENST00000507004 OR10H2O60403 315 aa13.36□□□□□ -0.27
HMGCS1-203ENST00000507004 SMIM24O75264 130 aa13.36□□□□□ -0.27
HMGCS1-203ENST00000507004 GUCY1B2O75343 617 aa13.36□□□□□ -0.27
HMGCS1-203ENST00000507004 WISP2O76076 250 aa13.36□□□□□ -0.27
HMGCS1-203ENST00000507004 GPR75O95800 540 aa13.36□□□□□ -0.27
HMGCS1-203ENST00000507004 IGKV3-11P04433 115 aa13.36□□□□□ -0.27
HMGCS1-203ENST00000507004 HOXD4P09016 255 aaPredicted RBP13.36□□□□□ -0.27
HMGCS1-203ENST00000507004 NR2F6P10588 404 aa13.36□□□□□ -0.27
HMGCS1-203ENST00000507004 GRNP28799 593 aaKnown RBP13.36□□□□□ -0.27
HMGCS1-203ENST00000507004 GPR85P60893 370 aa13.36□□□□□ -0.27
HMGCS1-203ENST00000507004 RPS13P62277 151 aaKnown RBP13.36□□□□□ -0.27
HMGCS1-203ENST00000507004 HSF1Q00613 529 aa13.36□□□□□ -0.27
HMGCS1-203ENST00000507004 CPSF6Q16630 551 aaKnown RBP eCLIP13.36□□□□□ -0.27
HMGCS1-203ENST00000507004 LGSNQ5TDP6 509 aa13.36□□□□□ -0.27
HMGCS1-203ENST00000507004 FAM47EQ6ZV65 393 aa13.36□□□□□ -0.27
HMGCS1-203ENST00000507004 PAGE2Q7Z2X7 111 aa13.36□□□□□ -0.27
HMGCS1-203ENST00000507004 CD163Q86VB7 1156 aa13.36□□□□□ -0.27
HMGCS1-203ENST00000507004 MMGT1Q8N4V1 131 aa13.36□□□□□ -0.27
HMGCS1-203ENST00000507004 SLC44A1Q8WWI5 657 aa13.36□□□□□ -0.27
HMGCS1-203ENST00000507004 RND1Q92730 232 aa13.36□□□□□ -0.27
HMGCS1-203ENST00000507004 ISL2Q96A47 359 aa13.36□□□□□ -0.27
HMGCS1-203ENST00000507004 SDCCAG3Q96C92 435 aa13.36□□□□□ -0.27
HMGCS1-203ENST00000507004 C14orf79Q96F83 325 aa13.36□□□□□ -0.27
HMGCS1-203ENST00000507004 SCYL1Q96KG9 808 aa13.36□□□□□ -0.27
HMGCS1-203ENST00000507004 MTERF1Q99551 399 aaKnown RBP13.36□□□□□ -0.27
HMGCS1-203ENST00000507004 LRRC1Q9BTT6 524 aa13.36□□□□□ -0.27
HMGCS1-203ENST00000507004 NTMT1Q9BV86 223 aa13.36□□□□□ -0.27
HMGCS1-203ENST00000507004 VPS11Q9H270 941 aa13.36□□□□□ -0.27
HMGCS1-203ENST00000507004 CNIH4Q9P003 139 aa13.36□□□□□ -0.27
HMGCS1-203ENST00000507004 CPSF2Q9P2I0 782 aaKnown RBP13.36□□□□□ -0.27
HMGCS1-203ENST00000507004 ZNF180Q9UJW8 692 aa13.36□□□□□ -0.27
HMGCS1-203ENST00000507004 ADAM29Q9UKF5 820 aa13.36□□□□□ -0.27
HMGCS1-203ENST00000507004 ITPR2Q14571 2701 aa13.36□□□□□ -0.27
HMGCS1-203ENST00000507004 ESYT3A0FGR9 886 aa13.35□□□□□ -0.27
HMGCS1-203ENST00000507004 HMX2A2RU54 273 aa13.35□□□□□ -0.27
HMGCS1-203ENST00000507004 FOXO6A8MYZ6 492 aa13.35□□□□□ -0.27
HMGCS1-203ENST00000507004 SAP18O00422 153 aaKnown RBP13.35□□□□□ -0.27
HMGCS1-203ENST00000507004 ADAM10O14672 748 aa13.35□□□□□ -0.27
HMGCS1-203ENST00000507004 PROM1O43490 865 aa13.35□□□□□ -0.27
HMGCS1-203ENST00000507004 URI1O94763 535 aaPredicted RBP13.35□□□□□ -0.27
HMGCS1-203ENST00000507004 GLSO94925 669 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms