RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 GPR180Q86V85 440 aa13.34□□□□□ -0.27
CDC42SE2-209ENST00000506419 MYLK4Q86YV6 388 aaPredicted RBP13.34□□□□□ -0.27
CDC42SE2-209ENST00000506419 MCEMP1Q8IX19 187 aa13.34□□□□□ -0.27
CDC42SE2-209ENST00000506419 L3MBTL4Q8NA19 623 aa13.34□□□□□ -0.27
CDC42SE2-209ENST00000506419 PSD4Q8NDX1 1056 aa13.34□□□□□ -0.27
CDC42SE2-209ENST00000506419 OR8K3Q8NH51 312 aa13.34□□□□□ -0.27
CDC42SE2-209ENST00000506419 WDR20Q8TBZ3 569 aa13.34□□□□□ -0.27
CDC42SE2-209ENST00000506419 SLC44A1Q8WWI5 657 aa13.34□□□□□ -0.27
CDC42SE2-209ENST00000506419 ASB15Q8WXK1 588 aa13.34□□□□□ -0.27
CDC42SE2-209ENST00000506419 IFT81Q8WYA0 676 aa13.34□□□□□ -0.27
CDC42SE2-209ENST00000506419 MTFMTQ96DP5 389 aaKnown RBP13.34□□□□□ -0.27
CDC42SE2-209ENST00000506419 SCYL1Q96KG9 808 aa13.34□□□□□ -0.27
CDC42SE2-209ENST00000506419 C16orf45Q96MC5 204 aaPredicted RBP13.34□□□□□ -0.27
CDC42SE2-209ENST00000506419 CDC42EP4Q9H3Q1 356 aaKnown RBP13.34□□□□□ -0.27
CDC42SE2-209ENST00000506419 RPF2Q9H7B2 306 aaKnown RBP13.34□□□□□ -0.27
CDC42SE2-209ENST00000506419 ACTR8Q9H981 624 aa13.34□□□□□ -0.27
CDC42SE2-209ENST00000506419 PRM3Q9NNZ6 103 aa13.34□□□□□ -0.27
CDC42SE2-209ENST00000506419 TIMMDC1Q9NPL8 285 aa13.34□□□□□ -0.27
CDC42SE2-209ENST00000506419 HPF1Q9NWY4 346 aa13.34□□□□□ -0.27
CDC42SE2-209ENST00000506419 CPSF2Q9P2I0 782 aaKnown RBP13.34□□□□□ -0.27
CDC42SE2-209ENST00000506419 PCDHGA11Q9Y5H2 935 aa13.34□□□□□ -0.27
CDC42SE2-209ENST00000506419 ADGRG4Q8IZF6 3080 aa13.33□□□□□ -0.27
CDC42SE2-209ENST00000506419 A0A1W2PR48 441 aa13.33□□□□□ -0.28
CDC42SE2-209ENST00000506419 SYNDIG1LA6NDD5 238 aa13.33□□□□□ -0.28
CDC42SE2-209ENST00000506419 G3V3Y1 287 aa13.33□□□□□ -0.28
CDC42SE2-209ENST00000506419 TFECO14948 347 aaPredicted RBP13.33□□□□□ -0.28
CDC42SE2-209ENST00000506419 TMPRSS11DO60235 418 aa13.33□□□□□ -0.28
CDC42SE2-209ENST00000506419 ACSL3O95573 720 aa13.33□□□□□ -0.28
CDC42SE2-209ENST00000506419 IGKV3-11P04433 115 aa13.33□□□□□ -0.28
CDC42SE2-209ENST00000506419 SNRPB2P08579 225 aaKnown RBP13.33□□□□□ -0.28
CDC42SE2-209ENST00000506419 CNR1P21554 472 aa13.33□□□□□ -0.28
CDC42SE2-209ENST00000506419 PTGS2P35354 604 aa13.33□□□□□ -0.28
CDC42SE2-209ENST00000506419 KIR3DL1P43629 444 aa13.33□□□□□ -0.28
CDC42SE2-209ENST00000506419 SERPINB8P50452 374 aa13.33□□□□□ -0.28
CDC42SE2-209ENST00000506419 SMSP52788 366 aa13.33□□□□□ -0.28
CDC42SE2-209ENST00000506419 FOLH1Q04609 750 aa13.33□□□□□ -0.28
CDC42SE2-209ENST00000506419 TECRLQ5HYJ1 363 aa13.33□□□□□ -0.28
CDC42SE2-209ENST00000506419 GPALPP1Q8IXQ4 340 aa13.33□□□□□ -0.28
CDC42SE2-209ENST00000506419 ZCCHC7Q8N3Z6 543 aaKnown RBP13.33□□□□□ -0.28
CDC42SE2-209ENST00000506419 PTGR2Q8N8N7 351 aaPredicted RBP13.33□□□□□ -0.28
CDC42SE2-209ENST00000506419 OR2M7Q8NG81 312 aa13.33□□□□□ -0.28
CDC42SE2-209ENST00000506419 UHMK1Q8TAS1 419 aaKnown RBP13.33□□□□□ -0.28
CDC42SE2-209ENST00000506419 TANKQ92844 425 aa13.33□□□□□ -0.28
CDC42SE2-209ENST00000506419 ISL2Q96A47 359 aa13.33□□□□□ -0.28
CDC42SE2-209ENST00000506419 PHF21BQ96EK2 531 aa13.33□□□□□ -0.28
CDC42SE2-209ENST00000506419 CDK15Q96Q40 435 aa13.33□□□□□ -0.28
CDC42SE2-209ENST00000506419 NOL11Q9H8H0 719 aaKnown RBP13.33□□□□□ -0.28
CDC42SE2-209ENST00000506419 ZBTB26Q9HCK0 441 aa13.33□□□□□ -0.28
CDC42SE2-209ENST00000506419 PLSCR2Q9NRY7 297 aa13.33□□□□□ -0.28
CDC42SE2-209ENST00000506419 PSD3Q9NYI0 1048 aa13.33□□□□□ -0.28
CDC42SE2-209ENST00000506419 SPACA6W5XKT8 324 aa13.33□□□□□ -0.28
CDC42SE2-209ENST00000506419 GTF3C1Q12789 2109 aa13.33□□□□□ -0.28
CDC42SE2-209ENST00000506419 CSMD2Q7Z408 3487 aa13.32□□□□□ -0.28
CDC42SE2-209ENST00000506419 TACC2O95359 2948 aa13.32□□□□□ -0.28
CDC42SE2-209ENST00000506419 A0A0A6YYD5 115 aa13.32□□□□□ -0.28
CDC42SE2-209ENST00000506419 E9PLN8 166 aa13.32□□□□□ -0.28
CDC42SE2-209ENST00000506419 PRRG2O14669 202 aa13.32□□□□□ -0.28
CDC42SE2-209ENST00000506419 PGRMC2O15173 223 aa13.32□□□□□ -0.28
CDC42SE2-209ENST00000506419 CDC40O60508 579 aaKnown RBP eCLIP13.32□□□□□ -0.28
CDC42SE2-209ENST00000506419 GLSO94925 669 aaPredicted RBP13.32□□□□□ -0.28
CDC42SE2-209ENST00000506419 NADKO95544 446 aaPredicted RBP13.32□□□□□ -0.28
CDC42SE2-209ENST00000506419 GPR75O95800 540 aa13.32□□□□□ -0.28
CDC42SE2-209ENST00000506419 TUBB4AP04350 444 aa13.32□□□□□ -0.28
CDC42SE2-209ENST00000506419 SBK3P0C264 359 aa13.32□□□□□ -0.28
CDC42SE2-209ENST00000506419 PHBP35232 272 aa13.32□□□□□ -0.28
CDC42SE2-209ENST00000506419 RAP1GDS1P52306 607 aa13.32□□□□□ -0.28
CDC42SE2-209ENST00000506419 PPIAP62937 165 aaKnown RBP13.32□□□□□ -0.28
CDC42SE2-209ENST00000506419 FOXO1Q12778 655 aa13.32□□□□□ -0.28
CDC42SE2-209ENST00000506419 EMC4Q5J8M3 183 aa13.32□□□□□ -0.28
CDC42SE2-209ENST00000506419 FAM219BQ5XKK7 198 aa13.32□□□□□ -0.28
CDC42SE2-209ENST00000506419 LYPD8Q6UX82 237 aa13.32□□□□□ -0.28
CDC42SE2-209ENST00000506419 C9orf40Q8IXQ3 194 aa13.32□□□□□ -0.28
CDC42SE2-209ENST00000506419 ZNF295-AS1Q8N0V1 137 aa13.32□□□□□ -0.28
CDC42SE2-209ENST00000506419 TMEM151AQ8N4L1 468 aa13.32□□□□□ -0.28
CDC42SE2-209ENST00000506419 MARVELD2Q8N4S9 558 aa13.32□□□□□ -0.28
CDC42SE2-209ENST00000506419 OR52B6Q8NGF0 335 aa13.32□□□□□ -0.28
CDC42SE2-209ENST00000506419 OR5L2Q8NGL0 311 aa13.32□□□□□ -0.28
CDC42SE2-209ENST00000506419 FAM57AQ8TBR7 257 aa13.32□□□□□ -0.28
CDC42SE2-209ENST00000506419 RBM18Q96H35 190 aaKnown RBP13.32□□□□□ -0.28
CDC42SE2-209ENST00000506419 NSUN5Q96P11 429 aaKnown RBP13.32□□□□□ -0.28
CDC42SE2-209ENST00000506419 DGAT2Q96PD7 388 aa13.32□□□□□ -0.28
CDC42SE2-209ENST00000506419 VKORC1Q9BQB6 163 aa13.32□□□□□ -0.28
CDC42SE2-209ENST00000506419 DDX31Q9H8H2 851 aaKnown RBP13.32□□□□□ -0.28
CDC42SE2-209ENST00000506419 CHST11Q9NPF2 352 aa13.32□□□□□ -0.28
CDC42SE2-209ENST00000506419 SEMA4BQ9NPR2 832 aaPredicted RBP13.32□□□□□ -0.28
CDC42SE2-209ENST00000506419 MS4A12Q9NXJ0 267 aa13.32□□□□□ -0.28
CDC42SE2-209ENST00000506419 TNPO3Q9Y5L0 923 aaKnown RBP13.32□□□□□ -0.28
CDC42SE2-209ENST00000506419 PDZD2O15018 2839 aa13.32□□□□□ -0.28
CDC42SE2-209ENST00000506419 A0A1B0GTL3 188 aa13.31□□□□□ -0.28
CDC42SE2-209ENST00000506419 A0A1W2PS29 197 aa13.31□□□□□ -0.28
CDC42SE2-209ENST00000506419 GLOD5A6NK44 160 aa13.31□□□□□ -0.28
CDC42SE2-209ENST00000506419 FAM166BA8MTA8 275 aa13.31□□□□□ -0.28
CDC42SE2-209ENST00000506419 FOXE1O00358 373 aaPredicted RBP13.31□□□□□ -0.28
CDC42SE2-209ENST00000506419 PPP6CO00743 305 aa13.31□□□□□ -0.28
CDC42SE2-209ENST00000506419 UGDHO60701 494 aa13.31□□□□□ -0.28
CDC42SE2-209ENST00000506419 CLDN9O95484 217 aa13.31□□□□□ -0.28
CDC42SE2-209ENST00000506419 CLDN14O95500 239 aa13.31□□□□□ -0.28
CDC42SE2-209ENST00000506419 GBAP04062 536 aa13.31□□□□□ -0.28
CDC42SE2-209ENST00000506419 CLPSP04118 112 aa13.31□□□□□ -0.28
CDC42SE2-209ENST00000506419 FAM58BPP0C7Q3 252 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms