RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 SERHL2Q9H4I8 314 aa13.42□□□□□ -0.26
TCOF1-207ENST00000504761 SERHLQ9NQF3 203 aa13.42□□□□□ -0.26
TCOF1-207ENST00000504761 HCN4Q9Y3Q4 1203 aa13.42□□□□□ -0.26
TCOF1-207ENST00000504761 A0A0A6YYC8 382 aaPredicted RBP13.42□□□□□ -0.26
TCOF1-207ENST00000504761 SLC9B1P1A6NJY1 282 aa13.42□□□□□ -0.26
TCOF1-207ENST00000504761 I3L1I5 382 aaPredicted RBP13.42□□□□□ -0.26
TCOF1-207ENST00000504761 XKRYO14609 159 aa13.42□□□□□ -0.26
TCOF1-207ENST00000504761 AGR2O95994 175 aa13.42□□□□□ -0.26
TCOF1-207ENST00000504761 DRD2P14416 443 aa13.42□□□□□ -0.26
TCOF1-207ENST00000504761 CD38P28907 300 aa13.42□□□□□ -0.26
TCOF1-207ENST00000504761 TAS2R38P59533 333 aa13.42□□□□□ -0.26
TCOF1-207ENST00000504761 PFN3P60673 137 aa13.42□□□□□ -0.26
TCOF1-207ENST00000504761 OC90Q02509 493 aaPredicted RBP13.42□□□□□ -0.26
TCOF1-207ENST00000504761 HYAL1Q12794 435 aa13.42□□□□□ -0.26
TCOF1-207ENST00000504761 P2RY8Q86VZ1 359 aa13.42□□□□□ -0.26
TCOF1-207ENST00000504761 OR52E4Q8NGH9 312 aa13.42□□□□□ -0.26
TCOF1-207ENST00000504761 DTNBP1Q96EV8 351 aa13.42□□□□□ -0.26
TCOF1-207ENST00000504761 ALG14Q96F25 216 aa13.42□□□□□ -0.26
TCOF1-207ENST00000504761 FAM129BQ96TA1 746 aa13.42□□□□□ -0.26
TCOF1-207ENST00000504761 UCK2Q9BZX2 261 aa13.42□□□□□ -0.26
TCOF1-207ENST00000504761 PELI2Q9HAT8 420 aa13.42□□□□□ -0.26
TCOF1-207ENST00000504761 TAAR2Q9P1P5 351 aa13.42□□□□□ -0.26
TCOF1-207ENST00000504761 FAM186AA6NE01 2351 aa13.42□□□□□ -0.26
TCOF1-207ENST00000504761 H3BNX3 289 aa13.42□□□□□ -0.26
TCOF1-207ENST00000504761 LDB3O75112 727 aa13.42□□□□□ -0.26
TCOF1-207ENST00000504761 COQ9O75208 318 aa13.42□□□□□ -0.26
TCOF1-207ENST00000504761 MLLT10P55197 1068 aa13.42□□□□□ -0.26
TCOF1-207ENST00000504761 FLYWCH1Q4VC44 716 aa13.42□□□□□ -0.26
TCOF1-207ENST00000504761 ZC3H14Q6PJT7 736 aaKnown RBP13.42□□□□□ -0.26
TCOF1-207ENST00000504761 FAM220AQ7Z4H9 259 aa13.42□□□□□ -0.26
TCOF1-207ENST00000504761 SFTPA1Q8IWL2 248 aa13.42□□□□□ -0.26
TCOF1-207ENST00000504761 SCAIQ8N9R8 606 aa13.42□□□□□ -0.26
TCOF1-207ENST00000504761 CNIH3Q8TBE1 160 aa13.42□□□□□ -0.26
TCOF1-207ENST00000504761 EID2BQ96D98 161 aa13.42□□□□□ -0.26
TCOF1-207ENST00000504761 ECHDC3Q96DC8 303 aa13.42□□□□□ -0.26
TCOF1-207ENST00000504761 TIMM29Q9BSF4 260 aa13.42□□□□□ -0.26
TCOF1-207ENST00000504761 OR6C2Q9NZP2 312 aa13.42□□□□□ -0.26
TCOF1-207ENST00000504761 CLEC4AQ9UMR7 237 aa13.42□□□□□ -0.26
TCOF1-207ENST00000504761 POFUT2Q9Y2G5 429 aa13.42□□□□□ -0.26
TCOF1-207ENST00000504761 PCDHGA4Q9Y5G9 962 aa13.42□□□□□ -0.26
TCOF1-207ENST00000504761 DNMT3AQ9Y6K1 912 aaPredicted RBP13.42□□□□□ -0.26
TCOF1-207ENST00000504761 MITFO75030 526 aaPredicted RBP13.41□□□□□ -0.26
TCOF1-207ENST00000504761 RDH16O75452 317 aa13.41□□□□□ -0.26
TCOF1-207ENST00000504761 ZNF821O75541 412 aaPredicted RBP13.41□□□□□ -0.26
TCOF1-207ENST00000504761 APOL3O95236 402 aa13.41□□□□□ -0.26
TCOF1-207ENST00000504761 NUDT7P0C024 238 aa13.41□□□□□ -0.26
TCOF1-207ENST00000504761 PORP16435 677 aaPredicted RBP13.41□□□□□ -0.26
TCOF1-207ENST00000504761 CCKBRP32239 447 aa13.41□□□□□ -0.26
TCOF1-207ENST00000504761 MC3RP41968 323 aa13.41□□□□□ -0.26
TCOF1-207ENST00000504761 ST3GAL3Q11203 375 aa13.41□□□□□ -0.26
TCOF1-207ENST00000504761 ARHGAP19Q14CB8 494 aa13.41□□□□□ -0.26
TCOF1-207ENST00000504761 EXOC3L2Q2M3D2 409 aa13.41□□□□□ -0.26
TCOF1-207ENST00000504761 SPATS1Q496A3 300 aa13.41□□□□□ -0.26
TCOF1-207ENST00000504761 JAZF1Q86VZ6 243 aa13.41□□□□□ -0.26
TCOF1-207ENST00000504761 DNAJC27Q9NZQ0 273 aa13.41□□□□□ -0.26
TCOF1-207ENST00000504761 TLR4O00206 839 aa13.41□□□□□ -0.26
TCOF1-207ENST00000504761 DUX1O43812 170 aa13.41□□□□□ -0.26
TCOF1-207ENST00000504761 KLK3P07288 261 aaPredicted RBP13.41□□□□□ -0.26
TCOF1-207ENST00000504761 PIM1P11309 404 aaPredicted RBP13.41□□□□□ -0.26
TCOF1-207ENST00000504761 NPPBP16860 134 aa13.41□□□□□ -0.26
TCOF1-207ENST00000504761 PSMA1P25786 263 aaKnown RBP13.41□□□□□ -0.26
TCOF1-207ENST00000504761 ADPRHP54922 357 aa13.41□□□□□ -0.26
TCOF1-207ENST00000504761 HBA1P69905 142 aa13.41□□□□□ -0.26
TCOF1-207ENST00000504761 RBBP4Q09028 425 aa13.41□□□□□ -0.26
TCOF1-207ENST00000504761 TRIQKQ629K1 86 aa13.41□□□□□ -0.26
TCOF1-207ENST00000504761 OR52E8Q6IFG1 317 aa13.41□□□□□ -0.26
TCOF1-207ENST00000504761 FGD2Q7Z6J4 655 aa13.41□□□□□ -0.26
TCOF1-207ENST00000504761 GALNT12Q8IXK2 581 aa13.41□□□□□ -0.26
TCOF1-207ENST00000504761 TCEANCQ8N8B7 351 aa13.41□□□□□ -0.26
TCOF1-207ENST00000504761 OR13H1Q8NG92 308 aa13.41□□□□□ -0.26
TCOF1-207ENST00000504761 OR52N2Q8NGI0 321 aa13.41□□□□□ -0.26
TCOF1-207ENST00000504761 OR9A2Q8NGT5 310 aa13.41□□□□□ -0.26
TCOF1-207ENST00000504761 NELL2Q99435 816 aa13.41□□□□□ -0.26
TCOF1-207ENST00000504761 TBC1D17Q9HA65 648 aa13.41□□□□□ -0.26
TCOF1-207ENST00000504761 SMOXQ9NWM0 555 aa13.41□□□□□ -0.26
TCOF1-207ENST00000504761 STOML2Q9UJZ1 356 aa13.41□□□□□ -0.26
TCOF1-207ENST00000504761 SGK494L7N484 410 aa13.41□□□□□ -0.26
TCOF1-207ENST00000504761 CASKO14936 926 aa13.41□□□□□ -0.26
TCOF1-207ENST00000504761 FRS3O43559 492 aa13.41□□□□□ -0.26
TCOF1-207ENST00000504761 AIREO43918 545 aa13.41□□□□□ -0.26
TCOF1-207ENST00000504761 CD160O95971 181 aa13.41□□□□□ -0.26
TCOF1-207ENST00000504761 MAZP56270 477 aaKnown RBP13.41□□□□□ -0.26
TCOF1-207ENST00000504761 BNC1Q01954 994 aa13.41□□□□□ -0.26
TCOF1-207ENST00000504761 ANGPT1Q15389 498 aa13.41□□□□□ -0.26
TCOF1-207ENST00000504761 KIAA1211LQ6NV74 962 aa13.41□□□□□ -0.26
TCOF1-207ENST00000504761 SLC29A4Q7RTT9 530 aa13.41□□□□□ -0.26
TCOF1-207ENST00000504761 TSSK6Q9BXA6 273 aa13.41□□□□□ -0.26
TCOF1-207ENST00000504761 OR5F1O95221 314 aa13.41□□□□□ -0.26
TCOF1-207ENST00000504761 APBB3O95704 486 aa13.41□□□□□ -0.26
TCOF1-207ENST00000504761 AGXTP21549 392 aa13.41□□□□□ -0.26
TCOF1-207ENST00000504761 DECR1Q16698 335 aa13.41□□□□□ -0.26
TCOF1-207ENST00000504761 RUNDC3AQ59EK9 446 aa13.41□□□□□ -0.26
TCOF1-207ENST00000504761 TMEM196Q5HYL7 178 aa13.41□□□□□ -0.26
TCOF1-207ENST00000504761 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.41□□□□□ -0.26
TCOF1-207ENST00000504761 SHISA6Q6ZSJ9 500 aa13.41□□□□□ -0.26
TCOF1-207ENST00000504761 PLPP6Q8IY26 295 aa13.41□□□□□ -0.26
TCOF1-207ENST00000504761 FRS2Q8WU20 508 aa13.41□□□□□ -0.26
TCOF1-207ENST00000504761 PATE1Q8WXA2 126 aa13.41□□□□□ -0.26
TCOF1-207ENST00000504761 OR1E3Q8WZA6 343 aa13.41□□□□□ -0.26
TCOF1-207ENST00000504761 FEVQ99581 238 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms