RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 CHST10O43529 356 aa9.79□□□□□ -0.84
TPM3-217ENST00000504663 FGF17O60258 216 aa9.79□□□□□ -0.84
TPM3-217ENST00000504663 GDF9O60383 454 aa9.79□□□□□ -0.84
TPM3-217ENST00000504663 DNAJA2O60884 412 aa9.79□□□□□ -0.84
TPM3-217ENST00000504663 LRP3O75074 770 aa9.79□□□□□ -0.84
TPM3-217ENST00000504663 DKK1O94907 266 aa9.79□□□□□ -0.84
TPM3-217ENST00000504663 CPSF4O95639 269 aaKnown RBP9.79□□□□□ -0.84
TPM3-217ENST00000504663 ME2P23368 584 aa9.79□□□□□ -0.84
TPM3-217ENST00000504663 PTGER1P34995 402 aa9.79□□□□□ -0.84
TPM3-217ENST00000504663 ALDH9A1P49189 494 aa9.79□□□□□ -0.84
TPM3-217ENST00000504663 ATXN3P54252 364 aaPredicted RBP9.79□□□□□ -0.84
TPM3-217ENST00000504663 OR4D2P58180 307 aa9.79□□□□□ -0.84
TPM3-217ENST00000504663 ACTR3P61158 418 aa9.79□□□□□ -0.84
TPM3-217ENST00000504663 IGLV3-21P80748 117 aaPredicted RBP9.79□□□□□ -0.84
TPM3-217ENST00000504663 SIM1P81133 766 aaPredicted RBP9.79□□□□□ -0.84
TPM3-217ENST00000504663 MAT1AQ00266 395 aaKnown RBP9.79□□□□□ -0.84
TPM3-217ENST00000504663 LIPEQ05469 1076 aa9.79□□□□□ -0.84
TPM3-217ENST00000504663 SYT16Q17RD7 645 aa9.79□□□□□ -0.84
TPM3-217ENST00000504663 SAMD4BQ5PRF9 694 aaKnown RBP9.79□□□□□ -0.84
TPM3-217ENST00000504663 ZNF385CQ66K41 422 aaPredicted RBP9.79□□□□□ -0.84
TPM3-217ENST00000504663 OR52E8Q6IFG1 317 aa9.79□□□□□ -0.84
TPM3-217ENST00000504663 CYB5D1Q6P9G0 228 aa9.79□□□□□ -0.84
TPM3-217ENST00000504663 PRR23CQ6ZRP0 262 aa9.79□□□□□ -0.84
TPM3-217ENST00000504663 MED25Q71SY5 747 aa9.79□□□□□ -0.84
TPM3-217ENST00000504663 COX15Q7KZN9 410 aa9.79□□□□□ -0.84
TPM3-217ENST00000504663 ARPINQ7Z6K5 226 aa9.79□□□□□ -0.84
TPM3-217ENST00000504663 PTOV1Q86YD1 416 aa9.79□□□□□ -0.84
TPM3-217ENST00000504663 RHBDD1Q8TEB9 315 aa9.79□□□□□ -0.84
TPM3-217ENST00000504663 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.79□□□□□ -0.84
TPM3-217ENST00000504663 OR5P2Q8WZ92 322 aa9.79□□□□□ -0.84
TPM3-217ENST00000504663 ATOH1Q92858 354 aaPredicted RBP9.79□□□□□ -0.84
TPM3-217ENST00000504663 PMEPA1Q969W9 287 aa9.79□□□□□ -0.84
TPM3-217ENST00000504663 ANKRD9Q96BM1 317 aaPredicted RBP9.79□□□□□ -0.84
TPM3-217ENST00000504663 CCDC124Q96CT7 223 aaKnown RBP9.79□□□□□ -0.84
TPM3-217ENST00000504663 FAIM2Q9BWQ8 316 aa9.79□□□□□ -0.84
TPM3-217ENST00000504663 ASPSCR1Q9BZE9 553 aa9.79□□□□□ -0.84
TPM3-217ENST00000504663 PCDHAC1Q9H158 963 aa9.79□□□□□ -0.84
TPM3-217ENST00000504663 GLIPR2Q9H4G4 154 aa9.79□□□□□ -0.84
TPM3-217ENST00000504663 SERHL2Q9H4I8 314 aa9.79□□□□□ -0.84
TPM3-217ENST00000504663 TMEM9BQ9NQ34 198 aa9.79□□□□□ -0.84
TPM3-217ENST00000504663 MIEF1Q9NQG6 463 aa9.79□□□□□ -0.84
TPM3-217ENST00000504663 SLC35C2Q9NQQ7 365 aa9.79□□□□□ -0.84
TPM3-217ENST00000504663 SLC22A11Q9NSA0 550 aa9.79□□□□□ -0.84
TPM3-217ENST00000504663 CUTCQ9NTM9 273 aa9.79□□□□□ -0.84
TPM3-217ENST00000504663 ACSS1Q9NUB1 689 aaPredicted RBP9.79□□□□□ -0.84
TPM3-217ENST00000504663 ATAD3AQ9NVI7 634 aa9.79□□□□□ -0.84
TPM3-217ENST00000504663 FTSJ1Q9UET6 329 aa9.79□□□□□ -0.84
TPM3-217ENST00000504663 UTS2RQ9UKP6 389 aa9.79□□□□□ -0.84
TPM3-217ENST00000504663 A0A1W2PRB8 838 aa9.78□□□□□ -0.84
TPM3-217ENST00000504663 C4orf47A7E2U8 309 aa9.78□□□□□ -0.84
TPM3-217ENST00000504663 ENTPD5O75356 428 aa9.78□□□□□ -0.84
TPM3-217ENST00000504663 BCAS2O75934 225 aaPredicted RBP9.78□□□□□ -0.84
TPM3-217ENST00000504663 OR2B3O76000 313 aa9.78□□□□□ -0.84
TPM3-217ENST00000504663 ABCB1P08183 1280 aaPredicted RBP9.78□□□□□ -0.84
TPM3-217ENST00000504663 GPX2P18283 190 aa9.78□□□□□ -0.84
TPM3-217ENST00000504663 CPN2P22792 545 aa9.78□□□□□ -0.84
TPM3-217ENST00000504663 ITGA1P56199 1179 aa9.78□□□□□ -0.84
TPM3-217ENST00000504663 LRRC74AQ0VAA2 488 aa9.78□□□□□ -0.84
TPM3-217ENST00000504663 MGAT2Q10469 447 aa9.78□□□□□ -0.84
TPM3-217ENST00000504663 GRM7Q14831 915 aa9.78□□□□□ -0.84
TPM3-217ENST00000504663 ADRM1Q16186 407 aa9.78□□□□□ -0.84
TPM3-217ENST00000504663 SPATS1Q496A3 300 aa9.78□□□□□ -0.84
TPM3-217ENST00000504663 EXOSC6Q5RKV6 272 aaKnown RBP9.78□□□□□ -0.84
TPM3-217ENST00000504663 CDCP2Q5VXM1 449 aa9.78□□□□□ -0.84
TPM3-217ENST00000504663 SAXO2Q658L1 398 aa9.78□□□□□ -0.84
TPM3-217ENST00000504663 LCN8Q6JVE9 175 aa9.78□□□□□ -0.84
TPM3-217ENST00000504663 RNF111Q6ZNA4 994 aa9.78□□□□□ -0.84
TPM3-217ENST00000504663 TMEM151BQ8IW70 566 aa9.78□□□□□ -0.84
TPM3-217ENST00000504663 METTL27Q8N6F8 245 aaPredicted RBP9.78□□□□□ -0.84
TPM3-217ENST00000504663 SLC38A9Q8NBW4 561 aa9.78□□□□□ -0.84
TPM3-217ENST00000504663 OR4A15Q8NGL6 344 aa9.78□□□□□ -0.84
TPM3-217ENST00000504663 ASB9Q96DX5 294 aa9.78□□□□□ -0.84
TPM3-217ENST00000504663 PANX1Q96RD7 426 aa9.78□□□□□ -0.84
TPM3-217ENST00000504663 GFM1Q96RP9 751 aaKnown RBP9.78□□□□□ -0.84
TPM3-217ENST00000504663 PRPF18Q99633 342 aaKnown RBP9.78□□□□□ -0.84
TPM3-217ENST00000504663 PRRX2Q99811 253 aa9.78□□□□□ -0.84
TPM3-217ENST00000504663 NLNQ9BYT8 704 aa9.78□□□□□ -0.84
TPM3-217ENST00000504663 TPT1P8Q9HAU6 139 aa9.78□□□□□ -0.84
TPM3-217ENST00000504663 ANKHQ9HCJ1 492 aa9.78□□□□□ -0.84
TPM3-217ENST00000504663 APMAPQ9HDC9 416 aa9.78□□□□□ -0.84
TPM3-217ENST00000504663 LANCL2Q9NS86 450 aa9.78□□□□□ -0.84
TPM3-217ENST00000504663 FGF21Q9NSA1 209 aa9.78□□□□□ -0.84
TPM3-217ENST00000504663 OCIAD1Q9NX40 245 aa9.78□□□□□ -0.84
TPM3-217ENST00000504663 TAS2R9Q9NYW1 312 aa9.78□□□□□ -0.84
TPM3-217ENST00000504663 ADA2Q9NZK5 511 aa9.78□□□□□ -0.84
TPM3-217ENST00000504663 HCN3Q9P1Z3 774 aa9.78□□□□□ -0.84
TPM3-217ENST00000504663 DHCR7Q9UBM7 475 aaKnown RBP9.78□□□□□ -0.84
TPM3-217ENST00000504663 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.78□□□□□ -0.84
TPM3-217ENST00000504663 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.77□□□□□ -0.85
TPM3-217ENST00000504663 A0A1W2PNU3 283 aaPredicted RBP9.77□□□□□ -0.85
TPM3-217ENST00000504663 TCRBV5S2A0A599 114 aa9.77□□□□□ -0.85
TPM3-217ENST00000504663 FAM220BPB1ANY3 271 aa9.77□□□□□ -0.85
TPM3-217ENST00000504663 C3orf80F5H4A9 247 aa9.77□□□□□ -0.85
TPM3-217ENST00000504663 H0YIG0 161 aa9.77□□□□□ -0.85
TPM3-217ENST00000504663 H3BNX3 289 aa9.77□□□□□ -0.85
TPM3-217ENST00000504663 DSCR3O14972 297 aa9.77□□□□□ -0.85
TPM3-217ENST00000504663 TNFRSF21O75509 655 aa9.77□□□□□ -0.85
TPM3-217ENST00000504663 ONECUT2O95948 504 aa9.77□□□□□ -0.85
TPM3-217ENST00000504663 LMNAP02545 664 aaKnown RBP9.77□□□□□ -0.85
TPM3-217ENST00000504663 NUDT7P0C024 238 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms