RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 LDB3O75112 727 aa11.16□□□□□ -0.62
PDLIM5-208ENST00000504489 ATP6AP2O75787 350 aa11.16□□□□□ -0.62
PDLIM5-208ENST00000504489 HPP00738 406 aa11.16□□□□□ -0.62
PDLIM5-208ENST00000504489 COX6A1P12074 109 aa11.16□□□□□ -0.62
PDLIM5-208ENST00000504489 DRD2P14416 443 aa11.16□□□□□ -0.62
PDLIM5-208ENST00000504489 OR4D2P58180 307 aa11.16□□□□□ -0.62
PDLIM5-208ENST00000504489 TAS2R50P59544 299 aa11.16□□□□□ -0.62
PDLIM5-208ENST00000504489 IGLV3-21P80748 117 aaPredicted RBP11.16□□□□□ -0.62
PDLIM5-208ENST00000504489 ZNF763Q0D2J5 394 aa11.16□□□□□ -0.62
PDLIM5-208ENST00000504489 SERTAD2Q14140 314 aa11.16□□□□□ -0.62
PDLIM5-208ENST00000504489 PCOLCEQ15113 449 aa11.16□□□□□ -0.62
PDLIM5-208ENST00000504489 TBR1Q16650 682 aa11.16□□□□□ -0.62
PDLIM5-208ENST00000504489 GALNTL6Q49A17 601 aa11.16□□□□□ -0.62
PDLIM5-208ENST00000504489 SFT2D3Q587I9 215 aa11.16□□□□□ -0.62
PDLIM5-208ENST00000504489 DCAF10Q5QP82 559 aa11.16□□□□□ -0.62
PDLIM5-208ENST00000504489 C6orf136Q5SQH8 315 aa11.16□□□□□ -0.62
PDLIM5-208ENST00000504489 OR52E8Q6IFG1 317 aa11.16□□□□□ -0.62
PDLIM5-208ENST00000504489 BORAQ6PGQ7 559 aa11.16□□□□□ -0.62
PDLIM5-208ENST00000504489 NDUFAF7Q7L592 441 aa11.16□□□□□ -0.62
PDLIM5-208ENST00000504489 WDR75Q8IWA0 830 aaKnown RBP11.16□□□□□ -0.62
PDLIM5-208ENST00000504489 LRRC34Q8IZ02 419 aa11.16□□□□□ -0.62
PDLIM5-208ENST00000504489 DNAJB14Q8TBM8 379 aa11.16□□□□□ -0.62
PDLIM5-208ENST00000504489 APOBEC4Q8WW27 367 aaKnown RBP11.16□□□□□ -0.62
PDLIM5-208ENST00000504489 TUBGCP3Q96CW5 907 aa11.16□□□□□ -0.62
PDLIM5-208ENST00000504489 IMMP1LQ96LU5 166 aa11.16□□□□□ -0.62
PDLIM5-208ENST00000504489 WDR77Q9BQA1 342 aaPredicted RBP11.16□□□□□ -0.62
PDLIM5-208ENST00000504489 MESP1Q9BRJ9 268 aa11.16□□□□□ -0.62
PDLIM5-208ENST00000504489 FAIM2Q9BWQ8 316 aa11.16□□□□□ -0.62
PDLIM5-208ENST00000504489 NUF2Q9BZD4 464 aa11.16□□□□□ -0.62
PDLIM5-208ENST00000504489 MEAF6Q9HAF1 191 aa11.16□□□□□ -0.62
PDLIM5-208ENST00000504489 SLCO1B3Q9NPD5 702 aa11.16□□□□□ -0.62
PDLIM5-208ENST00000504489 FBXL4Q9UKA2 621 aa11.16□□□□□ -0.62
PDLIM5-208ENST00000504489 DLGAP4Q9Y2H0 992 aa11.16□□□□□ -0.62
PDLIM5-208ENST00000504489 POLR3HQ9Y535 204 aaPredicted RBP11.16□□□□□ -0.62
PDLIM5-208ENST00000504489 ATMQ13315 3056 aa11.16□□□□□ -0.62
PDLIM5-208ENST00000504489 NSG1A0A0A6YYJ2 146 aa11.15□□□□□ -0.62
PDLIM5-208ENST00000504489 ARGFXA6NJG6 315 aa11.15□□□□□ -0.62
PDLIM5-208ENST00000504489 GLOD5A6NK44 160 aa11.15□□□□□ -0.62
PDLIM5-208ENST00000504489 TRPC5OSA6NMA1 111 aa11.15□□□□□ -0.62
PDLIM5-208ENST00000504489 PGRMC2O15173 223 aa11.15□□□□□ -0.62
PDLIM5-208ENST00000504489 FGF17O60258 216 aa11.15□□□□□ -0.62
PDLIM5-208ENST00000504489 PEX11AO75192 247 aa11.15□□□□□ -0.62
PDLIM5-208ENST00000504489 VPS4BO75351 444 aa11.15□□□□□ -0.62
PDLIM5-208ENST00000504489 PRKRAO75569 313 aaKnown RBP11.15□□□□□ -0.62
PDLIM5-208ENST00000504489 GPR75O95800 540 aa11.15□□□□□ -0.62
PDLIM5-208ENST00000504489 PRR35P0CG20 571 aa11.15□□□□□ -0.62
PDLIM5-208ENST00000504489 KITP10721 976 aa11.15□□□□□ -0.62
PDLIM5-208ENST00000504489 SOX8P57073 446 aa11.15□□□□□ -0.62
PDLIM5-208ENST00000504489 RPL38P63173 70 aaKnown RBP11.15□□□□□ -0.62
PDLIM5-208ENST00000504489 RHDQ02161 417 aa11.15□□□□□ -0.62
PDLIM5-208ENST00000504489 FOLH1Q04609 750 aa11.15□□□□□ -0.62
PDLIM5-208ENST00000504489 EEF1A2Q05639 463 aaKnown RBP11.15□□□□□ -0.62
PDLIM5-208ENST00000504489 ACTN3Q08043 901 aaPredicted RBP11.15□□□□□ -0.62
PDLIM5-208ENST00000504489 STX4Q12846 297 aa11.15□□□□□ -0.62
PDLIM5-208ENST00000504489 AIMP2Q13155 320 aaKnown RBP11.15□□□□□ -0.62
PDLIM5-208ENST00000504489 MAD2L1Q13257 205 aaPredicted RBP11.15□□□□□ -0.62
PDLIM5-208ENST00000504489 HEPACAMQ14CZ8 416 aa11.15□□□□□ -0.62
PDLIM5-208ENST00000504489 FAM71E1Q6IPT2 247 aa11.15□□□□□ -0.62
PDLIM5-208ENST00000504489 LARP4Q71RC2 724 aaKnown RBP eCLIP11.15□□□□□ -0.62
PDLIM5-208ENST00000504489 CLNKQ7Z7G1 428 aa11.15□□□□□ -0.62
PDLIM5-208ENST00000504489 PARP9Q8IXQ6 854 aa11.15□□□□□ -0.62
PDLIM5-208ENST00000504489 CLEC1AQ8NC01 280 aa11.15□□□□□ -0.62
PDLIM5-208ENST00000504489 UCN3Q969E3 161 aa11.15□□□□□ -0.62
PDLIM5-208ENST00000504489 LPAR4Q99677 370 aa11.15□□□□□ -0.62
PDLIM5-208ENST00000504489 TUBB6Q9BUF5 446 aa11.15□□□□□ -0.62
PDLIM5-208ENST00000504489 EBPLQ9BY08 206 aa11.15□□□□□ -0.62
PDLIM5-208ENST00000504489 ALOXE3Q9BYJ1 711 aa11.15□□□□□ -0.62
PDLIM5-208ENST00000504489 ING2Q9H160 280 aa11.15□□□□□ -0.62
PDLIM5-208ENST00000504489 AKTIPQ9H8T0 292 aa11.15□□□□□ -0.62
PDLIM5-208ENST00000504489 MYNNQ9NPC7 610 aa11.15□□□□□ -0.62
PDLIM5-208ENST00000504489 ADAP2Q9NPF8 381 aa11.15□□□□□ -0.62
PDLIM5-208ENST00000504489 ATP13A2Q9NQ11 1180 aa11.15□□□□□ -0.62
PDLIM5-208ENST00000504489 HEY2Q9UBP5 337 aa11.15□□□□□ -0.62
PDLIM5-208ENST00000504489 MARCOQ9UEW3 520 aaPredicted RBP11.15□□□□□ -0.62
PDLIM5-208ENST00000504489 CES1P1Q9UKY3 287 aa11.15□□□□□ -0.62
PDLIM5-208ENST00000504489 PSME2Q9UL46 239 aa11.15□□□□□ -0.62
PDLIM5-208ENST00000504489 ITPR1Q14643 2758 aa11.14□□□□□ -0.63
PDLIM5-208ENST00000504489 NBEAQ8NFP9 2946 aa11.14□□□□□ -0.63
PDLIM5-208ENST00000504489 IGHV3-20A0A0C4DH32 117 aa11.14□□□□□ -0.63
PDLIM5-208ENST00000504489 WASHC1A8K0Z3 465 aa11.14□□□□□ -0.63
PDLIM5-208ENST00000504489 SDHDO14521 159 aa11.14□□□□□ -0.63
PDLIM5-208ENST00000504489 ZNF195O14628 629 aa11.14□□□□□ -0.63
PDLIM5-208ENST00000504489 IL3P08700 152 aa11.14□□□□□ -0.63
PDLIM5-208ENST00000504489 PRPS2P11908 318 aa11.14□□□□□ -0.63
PDLIM5-208ENST00000504489 BCKDHAP12694 445 aa11.14□□□□□ -0.63
PDLIM5-208ENST00000504489 ICAM2P13598 275 aa11.14□□□□□ -0.63
PDLIM5-208ENST00000504489 SDC1P18827 310 aa11.14□□□□□ -0.63
PDLIM5-208ENST00000504489 TACR1P25103 407 aa11.14□□□□□ -0.63
PDLIM5-208ENST00000504489 PIK3R1P27986 724 aa11.14□□□□□ -0.63
PDLIM5-208ENST00000504489 MAPK1P28482 360 aa11.14□□□□□ -0.63
PDLIM5-208ENST00000504489 ASMTP46597 345 aa11.14□□□□□ -0.63
PDLIM5-208ENST00000504489 ID2Q02363 134 aa11.14□□□□□ -0.63
PDLIM5-208ENST00000504489 EMX2Q04743 252 aa11.14□□□□□ -0.63
PDLIM5-208ENST00000504489 C2orf80Q0P641 193 aa11.14□□□□□ -0.63
PDLIM5-208ENST00000504489 TERF2Q15554 542 aa11.14□□□□□ -0.63
PDLIM5-208ENST00000504489 ELAVL1Q15717 326 aaKnown RBP11.14□□□□□ -0.63
PDLIM5-208ENST00000504489 EXT1Q16394 746 aa11.14□□□□□ -0.63
PDLIM5-208ENST00000504489 CPZQ66K79 652 aa11.14□□□□□ -0.63
PDLIM5-208ENST00000504489 PLAG1Q6DJT9 500 aa11.14□□□□□ -0.63
PDLIM5-208ENST00000504489 OGFOD2Q6N063 350 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms