RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 FUBP1Q96AE4 644 aaKnown RBP4.87□□□□□ -1.63
NIPBL-204ENST00000504430 ZNF48Q96MX3 618 aaPredicted RBP4.87□□□□□ -1.63
NIPBL-204ENST00000504430 SFXN2Q96NB2 322 aa4.87□□□□□ -1.63
NIPBL-204ENST00000504430 MMS19Q96T76 1030 aa4.87□□□□□ -1.63
NIPBL-204ENST00000504430 GFI1Q99684 422 aa4.87□□□□□ -1.63
NIPBL-204ENST00000504430 UGT1A10Q9HAW8 530 aa4.87□□□□□ -1.63
NIPBL-204ENST00000504430 ZNF346Q9UL40 294 aaKnown RBP4.87□□□□□ -1.63
NIPBL-204ENST00000504430 TMED3Q9Y3Q3 217 aa4.87□□□□□ -1.63
NIPBL-204ENST00000504430 OR6C70A6NIJ9 312 aa4.87□□□□□ -1.63
NIPBL-204ENST00000504430 H0YJX3 145 aa4.87□□□□□ -1.63
NIPBL-204ENST00000504430 ITGB1BP1O14713 200 aa4.87□□□□□ -1.63
NIPBL-204ENST00000504430 LYPLA2O95372 231 aa4.87□□□□□ -1.63
NIPBL-204ENST00000504430 ZBTB11O95625 1053 aaPredicted RBP4.87□□□□□ -1.63
NIPBL-204ENST00000504430 FGF5P12034 268 aa4.87□□□□□ -1.63
NIPBL-204ENST00000504430 GTF2H1P32780 548 aa4.87□□□□□ -1.63
NIPBL-204ENST00000504430 PRCPP42785 496 aa4.87□□□□□ -1.63
NIPBL-204ENST00000504430 ZXDBP98169 803 aa4.87□□□□□ -1.63
NIPBL-204ENST00000504430 SP3Q02447 781 aa4.87□□□□□ -1.63
NIPBL-204ENST00000504430 SLAMF1Q13291 335 aa4.87□□□□□ -1.63
NIPBL-204ENST00000504430 MEP1AQ16819 746 aa4.87□□□□□ -1.63
NIPBL-204ENST00000504430 TCTN3Q6NUS6 607 aa4.87□□□□□ -1.63
NIPBL-204ENST00000504430 RGMBQ6NW40 437 aa4.87□□□□□ -1.63
NIPBL-204ENST00000504430 IL17RELQ6ZVW7 336 aa4.87□□□□□ -1.63
NIPBL-204ENST00000504430 SLC22A16Q86VW1 577 aa4.87□□□□□ -1.63
NIPBL-204ENST00000504430 TMC8Q8IU68 726 aa4.87□□□□□ -1.63
NIPBL-204ENST00000504430 ST13P4Q8IZP2 240 aaPredicted RBP4.87□□□□□ -1.63
NIPBL-204ENST00000504430 CHDHQ8NE62 594 aaPredicted RBP4.87□□□□□ -1.63
NIPBL-204ENST00000504430 OR4N2Q8NGD1 307 aa4.87□□□□□ -1.63
NIPBL-204ENST00000504430 PHF21AQ96BD5 680 aa4.87□□□□□ -1.63
NIPBL-204ENST00000504430 ACSS1Q9NUB1 689 aaPredicted RBP4.87□□□□□ -1.63
NIPBL-204ENST00000504430 GAR1Q9NY12 217 aaKnown RBP4.87□□□□□ -1.63
NIPBL-204ENST00000504430 WARS2Q9UGM6 360 aaKnown RBP4.87□□□□□ -1.63
NIPBL-204ENST00000504430 MRM2Q9UI43 246 aaKnown RBP4.87□□□□□ -1.63
NIPBL-204ENST00000504430 A0A1B0GUS0 222 aa4.87□□□□□ -1.63
NIPBL-204ENST00000504430 FAM240BA0A1B0GVZ2 78 aa4.87□□□□□ -1.63
NIPBL-204ENST00000504430 TMEM8BA6NDV4 472 aa4.87□□□□□ -1.63
NIPBL-204ENST00000504430 PDZK1P1A8MUH7 402 aa4.87□□□□□ -1.63
NIPBL-204ENST00000504430 ARHGEF33A8MVX0 844 aa4.87□□□□□ -1.63
NIPBL-204ENST00000504430 CRYGBP07316 175 aa4.87□□□□□ -1.63
NIPBL-204ENST00000504430 TFPIP10646 304 aa4.87□□□□□ -1.63
NIPBL-204ENST00000504430 HOXB8P17481 243 aaPredicted RBP4.87□□□□□ -1.63
NIPBL-204ENST00000504430 TNFSF10P50591 281 aa4.87□□□□□ -1.63
NIPBL-204ENST00000504430 CD81P60033 236 aa4.87□□□□□ -1.63
NIPBL-204ENST00000504430 FADDQ13158 208 aa4.87□□□□□ -1.63
NIPBL-204ENST00000504430 STX5Q13190 355 aa4.87□□□□□ -1.63
NIPBL-204ENST00000504430 ACKR1Q16570 336 aa4.87□□□□□ -1.63
NIPBL-204ENST00000504430 KHDRBS2Q5VWX1 349 aaKnown RBP4.87□□□□□ -1.63
NIPBL-204ENST00000504430 SLC16A9Q7RTY1 509 aa4.87□□□□□ -1.63
NIPBL-204ENST00000504430 B3GNT8Q7Z7M8 397 aa4.87□□□□□ -1.63
NIPBL-204ENST00000504430 S100A7AQ86SG5 101 aa4.87□□□□□ -1.63
NIPBL-204ENST00000504430 BHLHE22Q8NFJ8 381 aaPredicted RBP4.87□□□□□ -1.63
NIPBL-204ENST00000504430 TEFMQ96QE5 360 aaKnown RBP4.87□□□□□ -1.63
NIPBL-204ENST00000504430 POLR3FQ9H1D9 316 aaPredicted RBP4.87□□□□□ -1.63
NIPBL-204ENST00000504430 CSNK1G1Q9HCP0 422 aa4.87□□□□□ -1.63
NIPBL-204ENST00000504430 SPHK1Q9NYA1 384 aa4.87□□□□□ -1.63
NIPBL-204ENST00000504430 NARFQ9UHQ1 456 aa4.87□□□□□ -1.63
NIPBL-204ENST00000504430 OR10H1Q9Y4A9 318 aa4.87□□□□□ -1.63
NIPBL-204ENST00000504430 SLCO1B1Q9Y6L6 691 aa4.87□□□□□ -1.63
NIPBL-204ENST00000504430 NEURL4Q96JN8 1562 aa4.86□□□□□ -1.63
NIPBL-204ENST00000504430 SNED1Q8TER0 1413 aa4.86□□□□□ -1.63
NIPBL-204ENST00000504430 A0A0U1RQF3 1178 aa4.86□□□□□ -1.63
NIPBL-204ENST00000504430 A0A1W2PRB8 838 aa4.86□□□□□ -1.63
NIPBL-204ENST00000504430 NFATC1O95644 943 aa4.86□□□□□ -1.63
NIPBL-204ENST00000504430 HIST1H2ABP04908 130 aa4.86□□□□□ -1.63
NIPBL-204ENST00000504430 HIST1H2ADP20671 130 aa4.86□□□□□ -1.63
NIPBL-204ENST00000504430 HTR2AP28223 471 aa4.86□□□□□ -1.63
NIPBL-204ENST00000504430 NAA10P41227 235 aaPredicted RBP4.86□□□□□ -1.63
NIPBL-204ENST00000504430 IER3P46695 156 aa4.86□□□□□ -1.63
NIPBL-204ENST00000504430 COMPP49747 757 aaPredicted RBP4.86□□□□□ -1.63
NIPBL-204ENST00000504430 RAB9AP51151 201 aa4.86□□□□□ -1.63
NIPBL-204ENST00000504430 ATP1B3P54709 279 aa4.86□□□□□ -1.63
NIPBL-204ENST00000504430 SUMO2P61956 95 aaKnown RBP4.86□□□□□ -1.63
NIPBL-204ENST00000504430 SRSF3P84103 164 aaKnown RBP4.86□□□□□ -1.63
NIPBL-204ENST00000504430 CDH17Q12864 832 aa4.86□□□□□ -1.63
NIPBL-204ENST00000504430 CELF3Q5SZQ8 465 aaKnown RBP4.86□□□□□ -1.63
NIPBL-204ENST00000504430 C1QL3Q5VWW1 255 aa4.86□□□□□ -1.63
NIPBL-204ENST00000504430 MFSD14CQ5VZR4 134 aa4.86□□□□□ -1.63
NIPBL-204ENST00000504430 RNF207Q6ZRF8 634 aa4.86□□□□□ -1.63
NIPBL-204ENST00000504430 HIST3H2AQ7L7L0 130 aa4.86□□□□□ -1.63
NIPBL-204ENST00000504430 CNGA4Q8IV77 575 aa4.86□□□□□ -1.63
NIPBL-204ENST00000504430 LRRC57Q8N9N7 239 aa4.86□□□□□ -1.63
NIPBL-204ENST00000504430 OR13C3Q8NGS6 347 aa4.86□□□□□ -1.63
NIPBL-204ENST00000504430 ABHD4Q8TB40 342 aa4.86□□□□□ -1.63
NIPBL-204ENST00000504430 FAR1Q8WVX9 515 aa4.86□□□□□ -1.63
NIPBL-204ENST00000504430 NEU4Q8WWR8 484 aaPredicted RBP4.86□□□□□ -1.63
NIPBL-204ENST00000504430 AKR1E2Q96JD6 320 aa4.86□□□□□ -1.63
NIPBL-204ENST00000504430 LCORQ96JN0 433 aaPredicted RBP4.86□□□□□ -1.63
NIPBL-204ENST00000504430 ZNF582Q96NG8 517 aaPredicted RBP4.86□□□□□ -1.63
NIPBL-204ENST00000504430 FSD1LQ9BXM9 530 aa4.86□□□□□ -1.63
NIPBL-204ENST00000504430 FTHL17Q9BXU8 183 aa4.86□□□□□ -1.63
NIPBL-204ENST00000504430 KCNN2Q9H2S1 579 aa4.86□□□□□ -1.63
NIPBL-204ENST00000504430 IL1RL2Q9HB29 575 aa4.86□□□□□ -1.63
NIPBL-204ENST00000504430 MED17Q9NVC6 651 aa4.86□□□□□ -1.63
NIPBL-204ENST00000504430 ADA2Q9NZK5 511 aa4.86□□□□□ -1.63
NIPBL-204ENST00000504430 ADAM22Q9P0K1 906 aa4.86□□□□□ -1.63
NIPBL-204ENST00000504430 OR14J1Q9UGF5 321 aa4.86□□□□□ -1.63
NIPBL-204ENST00000504430 PHF11Q9UIL8 331 aa4.86□□□□□ -1.63
NIPBL-204ENST00000504430 LOC390937A0A1W2PQ73 354 aa4.86□□□□□ -1.63
NIPBL-204ENST00000504430 FABP12A6NFH5 140 aa4.86□□□□□ -1.63
NIPBL-204ENST00000504430 MS4A18H0YCH9 400 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms