RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 PDP2Q9P2J9 529 aa17.24■□□□□ 0.35
LINC00535-201ENST00000501400 U3KQV3 271 aa17.24■□□□□ 0.35
LINC00535-201ENST00000501400 SUV39H1O43463 412 aa17.23■□□□□ 0.35
LINC00535-201ENST00000501400 ERAL1O75616 437 aaKnown RBP17.23■□□□□ 0.35
LINC00535-201ENST00000501400 CLIC3O95833 236 aa17.23■□□□□ 0.35
LINC00535-201ENST00000501400 MYF6P23409 242 aa17.23■□□□□ 0.35
LINC00535-201ENST00000501400 FASLGP48023 281 aa17.23■□□□□ 0.35
LINC00535-201ENST00000501400 CCT3P49368 545 aaKnown RBP17.23■□□□□ 0.35
LINC00535-201ENST00000501400 ITGA1P56199 1179 aa17.23■□□□□ 0.35
LINC00535-201ENST00000501400 NXPH1P58417 271 aa17.23■□□□□ 0.35
LINC00535-201ENST00000501400 ADARB1P78563 741 aaKnown RBP17.23■□□□□ 0.35
LINC00535-201ENST00000501400 DMWDQ09019 674 aa17.23■□□□□ 0.35
LINC00535-201ENST00000501400 CEBPEQ15744 281 aa17.23■□□□□ 0.35
LINC00535-201ENST00000501400 MAPK11Q15759 364 aa17.23■□□□□ 0.35
LINC00535-201ENST00000501400 SPDYE7PQ495Y7 208 aa17.23■□□□□ 0.35
LINC00535-201ENST00000501400 DEFB134Q4QY38 66 aa17.23■□□□□ 0.35
LINC00535-201ENST00000501400 OR2T5Q6IEZ7 315 aa17.23■□□□□ 0.35
LINC00535-201ENST00000501400 PIWIL3Q7Z3Z3 882 aaKnown RBP17.23■□□□□ 0.35
LINC00535-201ENST00000501400 ZC3H7AQ8IWR0 971 aaKnown RBP17.23■□□□□ 0.35
LINC00535-201ENST00000501400 OR2T29Q8NH02 315 aa17.23■□□□□ 0.35
LINC00535-201ENST00000501400 LMX1AQ8TE12 382 aa17.23■□□□□ 0.35
LINC00535-201ENST00000501400 CYGBQ8WWM9 190 aa17.23■□□□□ 0.35
LINC00535-201ENST00000501400 C10orf90Q96M02 699 aa17.23■□□□□ 0.35
LINC00535-201ENST00000501400 BARD1Q99728 777 aaKnown RBP17.23■□□□□ 0.35
LINC00535-201ENST00000501400 DOHHQ9BU89 302 aa17.23■□□□□ 0.35
LINC00535-201ENST00000501400 ADPRHL2Q9NX46 363 aa17.23■□□□□ 0.35
LINC00535-201ENST00000501400 USE1Q9NZ43 259 aa17.23■□□□□ 0.35
LINC00535-201ENST00000501400 PADI4Q9UM07 663 aa17.23■□□□□ 0.35
LINC00535-201ENST00000501400 VILLO15195 856 aa17.23■□□□□ 0.35
LINC00535-201ENST00000501400 HCRTR1O43613 425 aa17.23■□□□□ 0.35
LINC00535-201ENST00000501400 DNAJB6O75190 326 aa17.23■□□□□ 0.35
LINC00535-201ENST00000501400 TNFAIP8O95379 198 aa17.23■□□□□ 0.35
LINC00535-201ENST00000501400 NR2F6P10588 404 aa17.23■□□□□ 0.35
LINC00535-201ENST00000501400 ALPPL2P10696 532 aa17.23■□□□□ 0.35
LINC00535-201ENST00000501400 CAPGP40121 348 aa17.23■□□□□ 0.35
LINC00535-201ENST00000501400 SELENOWP63302 87 aa17.23■□□□□ 0.35
LINC00535-201ENST00000501400 CRB2Q5IJ48 1285 aa17.23■□□□□ 0.35
LINC00535-201ENST00000501400 USP51Q70EK9 711 aa17.23■□□□□ 0.35
LINC00535-201ENST00000501400 CEP68Q76N32 757 aa17.23■□□□□ 0.35
LINC00535-201ENST00000501400 ARL14Q8N4G2 192 aa17.23■□□□□ 0.35
LINC00535-201ENST00000501400 CAMKVQ8NCB2 501 aa17.23■□□□□ 0.35
LINC00535-201ENST00000501400 ZNF681Q96N22 645 aa17.23■□□□□ 0.35
LINC00535-201ENST00000501400 BBS4Q96RK4 519 aa17.23■□□□□ 0.35
LINC00535-201ENST00000501400 A4GALTQ9NPC4 353 aa17.23■□□□□ 0.35
LINC00535-201ENST00000501400 KCMF1Q9P0J7 381 aa17.23■□□□□ 0.35
LINC00535-201ENST00000501400 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.22■□□□□ 0.35
LINC00535-201ENST00000501400 PRAMEF25A6NGN4 478 aa17.22■□□□□ 0.35
LINC00535-201ENST00000501400 HMGN4O00479 90 aa17.22■□□□□ 0.35
LINC00535-201ENST00000501400 STK25O00506 426 aa17.22■□□□□ 0.35
LINC00535-201ENST00000501400 E2F6O75461 281 aa17.22■□□□□ 0.35
LINC00535-201ENST00000501400 C8orf89P0DMQ9 161 aa17.22■□□□□ 0.35
LINC00535-201ENST00000501400 THRBP10828 461 aa17.22■□□□□ 0.35
LINC00535-201ENST00000501400 ST6GAL1P15907 406 aa17.22■□□□□ 0.35
LINC00535-201ENST00000501400 TNFRSF1BP20333 461 aa17.22■□□□□ 0.35
LINC00535-201ENST00000501400 CLCN2P51788 898 aa17.22■□□□□ 0.35
LINC00535-201ENST00000501400 TNFRSF17Q02223 184 aa17.22■□□□□ 0.35
LINC00535-201ENST00000501400 TP53BP2Q13625 1128 aa17.22■□□□□ 0.35
LINC00535-201ENST00000501400 ELOAQ14241 798 aaKnown RBP17.22■□□□□ 0.35
LINC00535-201ENST00000501400 MYBPC3Q14896 1274 aa17.22■□□□□ 0.35
LINC00535-201ENST00000501400 SUZ12Q15022 739 aaKnown RBP17.22■□□□□ 0.35
LINC00535-201ENST00000501400 SHQ1Q6PI26 577 aaKnown RBP17.22■□□□□ 0.35
LINC00535-201ENST00000501400 PRSS41Q7RTY9 318 aa17.22■□□□□ 0.35
LINC00535-201ENST00000501400 TMEFF1Q8IYR6 380 aa17.22■□□□□ 0.35
LINC00535-201ENST00000501400 ST13P4Q8IZP2 240 aaPredicted RBP17.22■□□□□ 0.35
LINC00535-201ENST00000501400 DHRSXQ8N5I4 330 aa17.22■□□□□ 0.35
LINC00535-201ENST00000501400 ZFP28Q8NHY6 868 aa17.22■□□□□ 0.35
LINC00535-201ENST00000501400 SDCCAG3Q96C92 435 aa17.22■□□□□ 0.35
LINC00535-201ENST00000501400 SPACA7Q96KW9 195 aa17.22■□□□□ 0.35
LINC00535-201ENST00000501400 SERINC2Q96SA4 455 aa17.22■□□□□ 0.35
LINC00535-201ENST00000501400 CSF3RQ99062 836 aa17.22■□□□□ 0.35
LINC00535-201ENST00000501400 FAM60AQ9NP50 221 aa17.22■□□□□ 0.35
LINC00535-201ENST00000501400 ANGPT4Q9Y264 503 aa17.22■□□□□ 0.35
LINC00535-201ENST00000501400 PADI2Q9Y2J8 665 aa17.22■□□□□ 0.35
LINC00535-201ENST00000501400 CCDC88CQ9P219 2028 aa17.21■□□□□ 0.35
LINC00535-201ENST00000501400 M0QX08 132 aa17.21■□□□□ 0.35
LINC00535-201ENST00000501400 BCHEP06276 602 aa17.21■□□□□ 0.35
LINC00535-201ENST00000501400 LINGO3P0C6S8 592 aa17.21■□□□□ 0.35
LINC00535-201ENST00000501400 PRKACGP22612 351 aa17.21■□□□□ 0.35
LINC00535-201ENST00000501400 FEN1P39748 380 aaKnown RBP17.21■□□□□ 0.35
LINC00535-201ENST00000501400 BIRC2Q13490 618 aa17.21■□□□□ 0.35
LINC00535-201ENST00000501400 RUNX2Q13950 521 aa17.21■□□□□ 0.35
LINC00535-201ENST00000501400 GPR19Q15760 415 aa17.21■□□□□ 0.35
LINC00535-201ENST00000501400 RPS26P11Q5JNZ5 115 aaPredicted RBP17.21■□□□□ 0.35
LINC00535-201ENST00000501400 TMEM64Q6YI46 380 aa17.21■□□□□ 0.35
LINC00535-201ENST00000501400 C17orf82Q86X59 251 aaPredicted RBP17.21■□□□□ 0.35
LINC00535-201ENST00000501400 GKN2Q86XP6 184 aa17.21■□□□□ 0.35
LINC00535-201ENST00000501400 OFCC1Q8IZS5 231 aa17.21■□□□□ 0.35
LINC00535-201ENST00000501400 SHISA5Q8N114 240 aa17.21■□□□□ 0.35
LINC00535-201ENST00000501400 SLC38A5Q8WUX1 472 aa17.21■□□□□ 0.35
LINC00535-201ENST00000501400 RAB8BQ92930 207 aa17.21■□□□□ 0.35
LINC00535-201ENST00000501400 GABARAPL1Q9H0R8 117 aa17.21■□□□□ 0.35
LINC00535-201ENST00000501400 CD320Q9NPF0 282 aa17.21■□□□□ 0.35
LINC00535-201ENST00000501400 PNPLA3Q9NST1 481 aa17.21■□□□□ 0.35
LINC00535-201ENST00000501400 ZSCAN32Q9NX65 697 aa17.21■□□□□ 0.35
LINC00535-201ENST00000501400 TMEFF2Q9UIK5 374 aaPredicted RBP17.21■□□□□ 0.35
LINC00535-201ENST00000501400 ENTPD4Q9Y227 616 aa17.21■□□□□ 0.35
LINC00535-201ENST00000501400 PRAMEF27A3QJZ7 478 aa17.21■□□□□ 0.35
LINC00535-201ENST00000501400 C9P02748 559 aa17.21■□□□□ 0.35
LINC00535-201ENST00000501400 TFPTP0C1Z6 253 aa17.21■□□□□ 0.35
LINC00535-201ENST00000501400 GPC1P35052 558 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms