RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 CASTOR1Q8WTX7 329 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 MCHR2Q969V1 340 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 TVP23BQ9NYZ1 205 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 LOC390937A0A1W2PQ73 354 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 SH3BGRLO75368 114 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 OR4E1P0C645 316 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 OR8U9P0C7N5 309 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 OR1G1P47890 313 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 COMPP49747 757 aaPredicted RBP4.6□□□□□ -1.67
NEAT1-202ENST00000501122 SNRPFP62306 86 aaKnown RBP4.6□□□□□ -1.67
NEAT1-202ENST00000501122 NIPAL3Q6P499 406 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 WFIKKN2Q8TEU8 576 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 NT5C3BQ969T7 300 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 TBC1D20Q96BZ9 403 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 ARHGAP39Q9C0H5 1083 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 TMEM235A6NFC5 223 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 RAD1O60671 282 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 TCTE1Q5JU00 501 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 CLLU1Q5K131 121 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 GPAT4Q86UL3 456 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 GSN-AS1Q9NRJ2 163 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 CNTN5O94779 1100 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 STAG3L2P0CL84 134 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 NDUFS1P28331 727 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 AKR1C1Q04828 323 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 C4orf17Q53FE4 359 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 TATDN1Q6P1N9 297 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 GPR137CQ8N3F9 429 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 EXD3Q8N9H8 876 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 TMEM161BQ8NDZ6 487 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 FAM20AQ96MK3 541 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 PURBQ96QR8 312 aaKnown RBP4.6□□□□□ -1.67
NEAT1-202ENST00000501122 RALGAPBQ86X10 1494 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 LRP5LA4QPB2 252 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 CYB561D2O14569 222 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 CAPN5O15484 640 aaPredicted RBP4.6□□□□□ -1.67
NEAT1-202ENST00000501122 JCHAINP01591 159 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 CPEP16870 476 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 HOXC13P31276 330 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 MTMR1Q13613 665 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 DPY19L4Q7Z388 723 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 GOLGA7Q7Z5G4 137 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 COPRSQ9NQ92 184 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 SIX4Q9UIU6 781 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 AKT3Q9Y243 479 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 CCSO14618 274 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 OTCP00480 354 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 CDH8P55286 799 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 C9orf64Q5T6V5 341 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 FAM35AQ86V20 835 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 FAM89AQ96GI7 184 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 SPACA7Q96KW9 195 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 TBX20Q9UMR3 447 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 FABP4P15090 132 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 DRD5P21918 477 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 TAP2Q03519 686 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 WDR88Q6ZMY6 472 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 ADGRF4Q8IZF3 695 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 OR13F1Q8NGS4 319 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 PKP4Q99569 1192 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 TBL1YQ9BQ87 522 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 ALG8Q9BVK2 526 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 FAM234BA2RU67 622 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 USP17L5A8MUK1 530 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 USP17L15C9J2P7 530 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 USP17L11C9JVI0 530 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 USP17L18D6R9N7 530 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 USP17L22D6RA61 530 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 USP17L17D6RBQ6 530 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 USP17L19D6RCP7 530 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 USP17L20D6RJB6 530 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 F9P00740 461 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 DTYMKP23919 212 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 HOXA13P31271 388 aaPredicted RBP4.6□□□□□ -1.67
NEAT1-202ENST00000501122 USP17L24Q0WX57 530 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 KANSL1Q7Z3B3 1105 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 IFI44Q8TCB0 444 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 ACSF2Q96CM8 615 aaPredicted RBP4.6□□□□□ -1.67
NEAT1-202ENST00000501122 RPS6KB2Q9UBS0 482 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 CAMK2AQ9UQM7 478 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 CDH10Q9Y6N8 788 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 SLC12A8A0AV02 714 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 TRABD2BA6NFA1 517 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 COL6A1P12109 1028 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 ZNF16P17020 682 aaPredicted RBP4.6□□□□□ -1.67
NEAT1-202ENST00000501122 ADARB1P78563 741 aaKnown RBP4.6□□□□□ -1.67
NEAT1-202ENST00000501122 CAMK2GQ13555 558 aaPredicted RBP4.6□□□□□ -1.67
NEAT1-202ENST00000501122 ABCA11PQ4W5N1 156 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 FRRS1Q6ZNA5 592 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 CDK15Q96Q40 435 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 PCYT2Q99447 389 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 PKMYT1Q99640 499 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 TCF25Q9BQ70 676 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 TREM2Q9NZC2 230 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 PRKYO43930 277 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 OR8G1Q15617 311 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 OR4A47Q6IF82 309 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 RNF130Q86XS8 419 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 ECHDC3Q96DC8 303 aa4.6□□□□□ -1.67
NEAT1-202ENST00000501122 OMDQ99983 421 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms