RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 PTGDR2Q9Y5Y4 395 aa4.82□□□□□ -1.64
FXN-205ENST00000498653 PLECQ15149 4684 aaKnown RBP4.81□□□□□ -1.64
FXN-205ENST00000498653 A0A096LPK6 155 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 A0A1W2PPM1 405 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 C3orf84H3BNL1 204 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 EIF3FO00303 357 aaPredicted RBP4.81□□□□□ -1.64
FXN-205ENST00000498653 LIN7AO14910 233 aaPredicted RBP4.81□□□□□ -1.64
FXN-205ENST00000498653 PHGDHO43175 533 aaKnown RBP4.81□□□□□ -1.64
FXN-205ENST00000498653 CLEC3AO75596 197 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 WNT11O96014 354 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 C2P06681 752 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 CBSLP0DN79 551 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 ACP5P13686 325 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 ZNF24P17028 368 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 ATF4P18848 351 aaPredicted RBP4.81□□□□□ -1.64
FXN-205ENST00000498653 AOAHP28039 575 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 CCR7P32248 378 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 CBSP35520 551 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 RGS4P49798 205 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 CLCNKAP51800 687 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 IL2P60568 153 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 SORDQ00796 357 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 TIAL1Q01085 375 aaKnown RBP eCLIP4.81□□□□□ -1.64
FXN-205ENST00000498653 PLOD1Q02809 727 aaPredicted RBP4.81□□□□□ -1.64
FXN-205ENST00000498653 HSPA14Q0VDF9 509 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 RPA4Q13156 261 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 BOP1Q14137 746 aaKnown RBP4.81□□□□□ -1.64
FXN-205ENST00000498653 PLCL1Q15111 1095 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 MSMPQ1L6U9 139 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 HSP90B2PQ58FF3 399 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 KPRPQ5T749 579 aaPredicted RBP4.81□□□□□ -1.64
FXN-205ENST00000498653 AGBL2Q5U5Z8 902 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 LRRC8EQ6NSJ5 796 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 PAQR3Q6TCH7 311 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 TMEM26Q6ZUK4 368 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 FAM214BQ7L5A3 538 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 CCDC91Q7Z6B0 441 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 CMC1Q7Z7K0 106 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 TBC1D1Q86TI0 1168 aaPredicted RBP4.81□□□□□ -1.64
FXN-205ENST00000498653 ZNF547Q8IVP9 402 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 CFAP206Q8IYR0 622 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 MDS2Q8NDY4 140 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 ACVR1CQ8NER5 493 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 OR1L3Q8NH93 324 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 CD200R1Q8TD46 325 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 ACMSDQ8TDX5 336 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 ASZ1Q8WWH4 475 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 ASB11Q8WXH4 323 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 KAT2AQ92830 837 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 ZBTB9Q96C00 473 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 FAM136AQ96C01 138 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 PGM2Q96G03 612 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 SCYL1Q96KG9 808 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 TSNARE1Q96NA8 513 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 RAB33BQ9H082 229 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 VPS11Q9H270 941 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 SLCO5A1Q9H2Y9 848 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 OSGEPL1Q9H4B0 414 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 COG4Q9H9E3 785 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 KLC4Q9NSK0 619 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 EURLQ9NYK6 297 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 SENP1Q9P0U3 644 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 HCN3Q9P1Z3 774 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 GALPQ9UBC7 116 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 SLC23A2Q9UGH3 650 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 KCNS2Q9ULS6 477 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 CDYLQ9Y232 598 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 KCNK6Q9Y257 313 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 ACOT9Q9Y305 439 aa4.81□□□□□ -1.64
FXN-205ENST00000498653 PCYT1BQ9Y5K3 369 aaPredicted RBP4.81□□□□□ -1.64
FXN-205ENST00000498653 IGHV4-30-2A0A087WSY4 118 aa4.8□□□□□ -1.64
FXN-205ENST00000498653 SLC5A10A0PJK1 596 aa4.8□□□□□ -1.64
FXN-205ENST00000498653 PABPN1LA6NDY0 278 aaKnown RBP4.8□□□□□ -1.64
FXN-205ENST00000498653 SLC9B1P1A6NJY1 282 aa4.8□□□□□ -1.64
FXN-205ENST00000498653 PDZK1P1A8MUH7 402 aa4.8□□□□□ -1.64
FXN-205ENST00000498653 DEFB108AA8MXU0 73 aa4.8□□□□□ -1.64
FXN-205ENST00000498653 HMGB1P1B2RPK0 211 aaPredicted RBP4.8□□□□□ -1.64
FXN-205ENST00000498653 GOLGA8RI6L899 631 aa4.8□□□□□ -1.64
FXN-205ENST00000498653 IFRD1O00458 451 aaPredicted RBP4.8□□□□□ -1.64
FXN-205ENST00000498653 COPEO14579 308 aa4.8□□□□□ -1.64
FXN-205ENST00000498653 KIAA0513O60268 411 aa4.8□□□□□ -1.64
FXN-205ENST00000498653 SNX2O60749 519 aa4.8□□□□□ -1.64
FXN-205ENST00000498653 DNAJA2O60884 412 aa4.8□□□□□ -1.64
FXN-205ENST00000498653 GPC4O75487 556 aa4.8□□□□□ -1.64
FXN-205ENST00000498653 ALDOAP04075 364 aaKnown RBP4.8□□□□□ -1.64
FXN-205ENST00000498653 GSTA1P08263 222 aa4.8□□□□□ -1.64
FXN-205ENST00000498653 LTA4HP09960 611 aaKnown RBP4.8□□□□□ -1.64
FXN-205ENST00000498653 SLC35G4P0C7Q5 338 aa4.8□□□□□ -1.64
FXN-205ENST00000498653 PRR35P0CG20 571 aa4.8□□□□□ -1.64
FXN-205ENST00000498653 SLC35E2BP0CK96 405 aa4.8□□□□□ -1.64
FXN-205ENST00000498653 MPC1LP0DKB6 136 aa4.8□□□□□ -1.64
FXN-205ENST00000498653 ENO3P13929 434 aaPredicted RBP4.8□□□□□ -1.64
FXN-205ENST00000498653 SLC2A4P14672 509 aa4.8□□□□□ -1.64
FXN-205ENST00000498653 ZNF37AP17032 561 aaPredicted RBP4.8□□□□□ -1.64
FXN-205ENST00000498653 AMD1P17707 334 aa4.8□□□□□ -1.64
FXN-205ENST00000498653 SLC26A3P40879 764 aa4.8□□□□□ -1.64
FXN-205ENST00000498653 HALP42357 657 aa4.8□□□□□ -1.64
FXN-205ENST00000498653 MAGEA12P43365 314 aa4.8□□□□□ -1.64
FXN-205ENST00000498653 CCT5P48643 541 aa4.8□□□□□ -1.64
FXN-205ENST00000498653 NR0B1P51843 470 aaKnown RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms