RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 ASPHQ12797 758 aa11.12□□□□□ -0.63
CNOT4-211ENST00000498534 CHIT1Q13231 466 aa11.12□□□□□ -0.63
CNOT4-211ENST00000498534 FASTKD3Q14CZ7 662 aaKnown RBP11.12□□□□□ -0.63
CNOT4-211ENST00000498534 FBXO48Q5FWF7 155 aa11.12□□□□□ -0.63
CNOT4-211ENST00000498534 SWT1Q5T5J6 900 aaKnown RBP11.12□□□□□ -0.63
CNOT4-211ENST00000498534 ADNP2Q6IQ32 1131 aa11.12□□□□□ -0.63
CNOT4-211ENST00000498534 MED27Q6P2C8 311 aa11.12□□□□□ -0.63
CNOT4-211ENST00000498534 SLC15A4Q8N697 577 aa11.12□□□□□ -0.63
CNOT4-211ENST00000498534 ZNF321PQ8N8H1 164 aa11.12□□□□□ -0.63
CNOT4-211ENST00000498534 BBOF1Q8ND07 529 aa11.12□□□□□ -0.63
CNOT4-211ENST00000498534 SLC22A8Q8TCC7 542 aa11.12□□□□□ -0.63
CNOT4-211ENST00000498534 CMTM7Q96FZ5 175 aa11.12□□□□□ -0.63
CNOT4-211ENST00000498534 ART5Q96L15 291 aa11.12□□□□□ -0.63
CNOT4-211ENST00000498534 MAPKAP1Q9BPZ7 522 aa11.12□□□□□ -0.63
CNOT4-211ENST00000498534 CENPKQ9BS16 269 aa11.12□□□□□ -0.63
CNOT4-211ENST00000498534 TMEM79Q9BSE2 394 aa11.12□□□□□ -0.63
CNOT4-211ENST00000498534 CD244Q9BZW8 370 aa11.12□□□□□ -0.63
CNOT4-211ENST00000498534 CAB39LQ9H9S4 337 aa11.12□□□□□ -0.63
CNOT4-211ENST00000498534 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.12□□□□□ -0.63
CNOT4-211ENST00000498534 MS4A12Q9NXJ0 267 aa11.12□□□□□ -0.63
CNOT4-211ENST00000498534 TUBA8Q9NY65 449 aaPredicted RBP11.12□□□□□ -0.63
CNOT4-211ENST00000498534 PTBP2Q9UKA9 531 aaKnown RBP11.12□□□□□ -0.63
CNOT4-211ENST00000498534 RNF112Q9ULX5 631 aa11.12□□□□□ -0.63
CNOT4-211ENST00000498534 EDARQ9UNE0 448 aa11.12□□□□□ -0.63
CNOT4-211ENST00000498534 EML6Q6ZMW3 1958 aa11.12□□□□□ -0.63
CNOT4-211ENST00000498534 NF1P21359 2839 aa11.12□□□□□ -0.63
CNOT4-211ENST00000498534 A0A0G2JNJ9 132 aa11.11□□□□□ -0.63
CNOT4-211ENST00000498534 RTCAO00442 366 aaKnown RBP11.11□□□□□ -0.63
CNOT4-211ENST00000498534 PHGDHO43175 533 aaKnown RBP11.11□□□□□ -0.63
CNOT4-211ENST00000498534 PRAMEF4O60810 478 aa11.11□□□□□ -0.63
CNOT4-211ENST00000498534 PIAS1O75925 651 aa11.11□□□□□ -0.63
CNOT4-211ENST00000498534 ETHE1O95571 254 aa11.11□□□□□ -0.63
CNOT4-211ENST00000498534 CCL3P10147 92 aa11.11□□□□□ -0.63
CNOT4-211ENST00000498534 PCNAP12004 261 aa11.11□□□□□ -0.63
CNOT4-211ENST00000498534 CD1DP15813 335 aa11.11□□□□□ -0.63
CNOT4-211ENST00000498534 SERPINB1P30740 379 aa11.11□□□□□ -0.63
CNOT4-211ENST00000498534 DNAJA1P31689 397 aaKnown RBP11.11□□□□□ -0.63
CNOT4-211ENST00000498534 SSR2P43308 183 aa11.11□□□□□ -0.63
CNOT4-211ENST00000498534 STT3AP46977 705 aa11.11□□□□□ -0.63
CNOT4-211ENST00000498534 KCNJ2P63252 427 aa11.11□□□□□ -0.63
CNOT4-211ENST00000498534 FOXO1Q12778 655 aa11.11□□□□□ -0.63
CNOT4-211ENST00000498534 CBLBQ13191 982 aa11.11□□□□□ -0.63
CNOT4-211ENST00000498534 SLAMF1Q13291 335 aa11.11□□□□□ -0.63
CNOT4-211ENST00000498534 OR4D1Q15615 310 aa11.11□□□□□ -0.63
CNOT4-211ENST00000498534 SLC25A35Q3KQZ1 300 aa11.11□□□□□ -0.63
CNOT4-211ENST00000498534 C1orf185Q5T7R7 199 aa11.11□□□□□ -0.63
CNOT4-211ENST00000498534 PRAMEF9Q5VWM5 478 aa11.11□□□□□ -0.63
CNOT4-211ENST00000498534 OR4C11Q6IEV9 310 aa11.11□□□□□ -0.63
CNOT4-211ENST00000498534 ARSKQ6UWY0 536 aa11.11□□□□□ -0.63
CNOT4-211ENST00000498534 CAPN12Q6ZSI9 719 aa11.11□□□□□ -0.63
CNOT4-211ENST00000498534 UBE3DQ7Z6J8 389 aa11.11□□□□□ -0.63
CNOT4-211ENST00000498534 CREG2Q8IUH2 290 aa11.11□□□□□ -0.63
CNOT4-211ENST00000498534 OR4N5Q8IXE1 308 aa11.11□□□□□ -0.63
CNOT4-211ENST00000498534 DND1Q8IYX4 353 aaKnown RBP11.11□□□□□ -0.63
CNOT4-211ENST00000498534 NUBPLQ8TB37 319 aa11.11□□□□□ -0.63
CNOT4-211ENST00000498534 STAG3L4Q8TBR4 150 aa11.11□□□□□ -0.63
CNOT4-211ENST00000498534 ZNF721Q8TF20 911 aa11.11□□□□□ -0.63
CNOT4-211ENST00000498534 ZNF473Q8WTR7 871 aaKnown RBP11.11□□□□□ -0.63
CNOT4-211ENST00000498534 TANKQ92844 425 aa11.11□□□□□ -0.63
CNOT4-211ENST00000498534 RGMAQ96B86 450 aa11.11□□□□□ -0.63
CNOT4-211ENST00000498534 ANKRD9Q96BM1 317 aaPredicted RBP11.11□□□□□ -0.63
CNOT4-211ENST00000498534 LRRC46Q96FV0 321 aa11.11□□□□□ -0.63
CNOT4-211ENST00000498534 CPNE1Q99829 537 aa11.11□□□□□ -0.63
CNOT4-211ENST00000498534 MCMBPQ9BTE3 642 aa11.11□□□□□ -0.63
CNOT4-211ENST00000498534 MS4A8Q9BY19 250 aa11.11□□□□□ -0.63
CNOT4-211ENST00000498534 RPF2Q9H7B2 306 aaKnown RBP11.11□□□□□ -0.63
CNOT4-211ENST00000498534 DNAJB12Q9NXW2 375 aaKnown RBP11.11□□□□□ -0.63
CNOT4-211ENST00000498534 CNIH4Q9P003 139 aa11.11□□□□□ -0.63
CNOT4-211ENST00000498534 Q9UFV3 132 aa11.11□□□□□ -0.63
CNOT4-211ENST00000498534 ADGRE2Q9UHX3 823 aa11.11□□□□□ -0.63
CNOT4-211ENST00000498534 BOKQ9UMX3 212 aaPredicted RBP11.11□□□□□ -0.63
CNOT4-211ENST00000498534 SNX24Q9Y343 169 aa11.11□□□□□ -0.63
CNOT4-211ENST00000498534 ATG4BQ9Y4P1 393 aa11.11□□□□□ -0.63
CNOT4-211ENST00000498534 LIPGQ9Y5X9 500 aa11.11□□□□□ -0.63
CNOT4-211ENST00000498534 SAR1BQ9Y6B6 198 aa11.11□□□□□ -0.63
CNOT4-211ENST00000498534 IQANK1A0A1B0GTG1 560 aa11.1□□□□□ -0.63
CNOT4-211ENST00000498534 ZNF354AO60765 605 aaPredicted RBP11.1□□□□□ -0.63
CNOT4-211ENST00000498534 SH3BGRLO75368 114 aa11.1□□□□□ -0.63
CNOT4-211ENST00000498534 WISP3O95389 354 aaPredicted RBP11.1□□□□□ -0.63
CNOT4-211ENST00000498534 NADKO95544 446 aaPredicted RBP11.1□□□□□ -0.63
CNOT4-211ENST00000498534 CELA3AP09093 270 aa11.1□□□□□ -0.63
CNOT4-211ENST00000498534 CD22P20273 847 aa11.1□□□□□ -0.63
CNOT4-211ENST00000498534 SERPINB3P29508 390 aa11.1□□□□□ -0.63
CNOT4-211ENST00000498534 SSTR1P30872 391 aa11.1□□□□□ -0.63
CNOT4-211ENST00000498534 SPRP35270 261 aaPredicted RBP11.1□□□□□ -0.63
CNOT4-211ENST00000498534 PIGAP37287 484 aa11.1□□□□□ -0.63
CNOT4-211ENST00000498534 PEX19P40855 299 aa11.1□□□□□ -0.63
CNOT4-211ENST00000498534 RPL21P46778 160 aaKnown RBP11.1□□□□□ -0.63
CNOT4-211ENST00000498534 RAP1GDS1P52306 607 aa11.1□□□□□ -0.63
CNOT4-211ENST00000498534 RAB10P61026 200 aa11.1□□□□□ -0.63
CNOT4-211ENST00000498534 FOLH1Q04609 750 aa11.1□□□□□ -0.63
CNOT4-211ENST00000498534 CALCOCO2Q13137 446 aa11.1□□□□□ -0.63
CNOT4-211ENST00000498534 ZNF791Q3KP31 576 aaPredicted RBP11.1□□□□□ -0.63
CNOT4-211ENST00000498534 DEPDC1Q5TB30 811 aa11.1□□□□□ -0.63
CNOT4-211ENST00000498534 KHDRBS2Q5VWX1 349 aaKnown RBP11.1□□□□□ -0.63
CNOT4-211ENST00000498534 RTL6Q6ICC9 239 aa11.1□□□□□ -0.63
CNOT4-211ENST00000498534 ZNF793Q6ZN11 406 aa11.1□□□□□ -0.63
CNOT4-211ENST00000498534 C3orf62Q6ZUJ4 267 aa11.1□□□□□ -0.63
CNOT4-211ENST00000498534 RAPH1Q70E73 1250 aa11.1□□□□□ -0.63
CNOT4-211ENST00000498534 CYS1Q717R9 158 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms