RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 NME3Q13232 169 aa3.19□□□□□ -1.9
CALD1-224ENST00000498254 SRSF9Q13242 221 aaKnown RBP eCLIP3.19□□□□□ -1.9
CALD1-224ENST00000498254 SCGB2A2Q13296 93 aa3.19□□□□□ -1.9
CALD1-224ENST00000498254 MTF1Q14872 753 aa3.19□□□□□ -1.9
CALD1-224ENST00000498254 EFTUD2Q15029 972 aaKnown RBP eCLIP3.19□□□□□ -1.9
CALD1-224ENST00000498254 CLPPQ16740 277 aaPredicted RBP3.19□□□□□ -1.9
CALD1-224ENST00000498254 IL23RQ5VWK5 629 aa3.19□□□□□ -1.9
CALD1-224ENST00000498254 PLPP4Q5VZY2 271 aa3.19□□□□□ -1.9
CALD1-224ENST00000498254 HIST2H2AA3Q6FI13 130 aa3.19□□□□□ -1.9
CALD1-224ENST00000498254 FAM53AQ6NSI3 398 aaPredicted RBP3.19□□□□□ -1.9
CALD1-224ENST00000498254 SLC25A24Q6NUK1 477 aa3.19□□□□□ -1.9
CALD1-224ENST00000498254 Q6ZRG5 221 aa3.19□□□□□ -1.9
CALD1-224ENST00000498254 Q6ZSR9 355 aa3.19□□□□□ -1.9
CALD1-224ENST00000498254 CHMP1BQ7LBR1 199 aa3.19□□□□□ -1.9
CALD1-224ENST00000498254 YRDCQ86U90 279 aaKnown RBP3.19□□□□□ -1.9
CALD1-224ENST00000498254 MISPQ8IVT2 679 aa3.19□□□□□ -1.9
CALD1-224ENST00000498254 TBC1D21Q8IYX1 336 aa3.19□□□□□ -1.9
CALD1-224ENST00000498254 MARVELD2Q8N4S9 558 aa3.19□□□□□ -1.9
CALD1-224ENST00000498254 MINDY2Q8NBR6 621 aa3.19□□□□□ -1.9
CALD1-224ENST00000498254 OR5AP2Q8NGF4 316 aa3.19□□□□□ -1.9
CALD1-224ENST00000498254 OR10G8Q8NGN5 311 aa3.19□□□□□ -1.9
CALD1-224ENST00000498254 DQX1Q8TE96 717 aaKnown RBP3.19□□□□□ -1.9
CALD1-224ENST00000498254 THRSPQ92748 146 aa3.19□□□□□ -1.9
CALD1-224ENST00000498254 DTNBP1Q96EV8 351 aa3.19□□□□□ -1.9
CALD1-224ENST00000498254 CBWD1Q9BRT8 395 aa3.19□□□□□ -1.9
CALD1-224ENST00000498254 ZNF416Q9BWM5 594 aa3.19□□□□□ -1.9
CALD1-224ENST00000498254 NLNQ9BYT8 704 aa3.19□□□□□ -1.9
CALD1-224ENST00000498254 MMP28Q9H239 520 aa3.19□□□□□ -1.9
CALD1-224ENST00000498254 SUDS3Q9H7L9 328 aaPredicted RBP3.19□□□□□ -1.9
CALD1-224ENST00000498254 ECT2Q9H8V3 914 aa3.19□□□□□ -1.9
CALD1-224ENST00000498254 SLC25A19Q9HC21 320 aa3.19□□□□□ -1.9
CALD1-224ENST00000498254 VAT1LQ9HCJ6 419 aa3.19□□□□□ -1.9
CALD1-224ENST00000498254 CENPMQ9NSP4 180 aa3.19□□□□□ -1.9
CALD1-224ENST00000498254 MGAT4BQ9UQ53 548 aa3.19□□□□□ -1.9
CALD1-224ENST00000498254 DISP3Q9P2K9 1392 aa3.18□□□□□ -1.9
CALD1-224ENST00000498254 A0A0U1RQV5 110 aa3.18□□□□□ -1.9
CALD1-224ENST00000498254 FAM230AA0A1W2PPH8 454 aa3.18□□□□□ -1.9
CALD1-224ENST00000498254 TMCO5BA8MYB1 307 aa3.18□□□□□ -1.9
CALD1-224ENST00000498254 LGALS8O00214 317 aa3.18□□□□□ -1.9
CALD1-224ENST00000498254 VPS26AO75436 327 aa3.18□□□□□ -1.9
CALD1-224ENST00000498254 AP2A2O94973 939 aa3.18□□□□□ -1.9
CALD1-224ENST00000498254 HIST1H2AGP0C0S8 130 aaPredicted RBP3.18□□□□□ -1.9
CALD1-224ENST00000498254 PAX7P23759 505 aa3.18□□□□□ -1.9
CALD1-224ENST00000498254 TMOD1P28289 359 aa3.18□□□□□ -1.9
CALD1-224ENST00000498254 CHRNB4P30926 498 aa3.18□□□□□ -1.9
CALD1-224ENST00000498254 OPRL1P41146 370 aa3.18□□□□□ -1.9
CALD1-224ENST00000498254 CD151P48509 253 aa3.18□□□□□ -1.9
CALD1-224ENST00000498254 NPY2RP49146 381 aa3.18□□□□□ -1.9
CALD1-224ENST00000498254 FOXG1P55316 489 aaPredicted RBP3.18□□□□□ -1.9
CALD1-224ENST00000498254 PEX3P56589 373 aa3.18□□□□□ -1.9
CALD1-224ENST00000498254 SNRPD1P62314 119 aaKnown RBP3.18□□□□□ -1.9
CALD1-224ENST00000498254 RPS4XP62701 263 aaKnown RBP3.18□□□□□ -1.9
CALD1-224ENST00000498254 NUCB2P80303 420 aa3.18□□□□□ -1.9
CALD1-224ENST00000498254 RPL36AP83881 106 aaKnown RBP3.18□□□□□ -1.9
CALD1-224ENST00000498254 GUCY2DQ02846 1103 aa3.18□□□□□ -1.9
CALD1-224ENST00000498254 HSF2Q03933 536 aa3.18□□□□□ -1.9
CALD1-224ENST00000498254 HSPA14Q0VDF9 509 aa3.18□□□□□ -1.9
CALD1-224ENST00000498254 SNX1Q13596 522 aa3.18□□□□□ -1.9
CALD1-224ENST00000498254 PDIA5Q14554 519 aa3.18□□□□□ -1.9
CALD1-224ENST00000498254 P2RY14Q15391 338 aa3.18□□□□□ -1.9
CALD1-224ENST00000498254 FAM189A2Q15884 450 aa3.18□□□□□ -1.9
CALD1-224ENST00000498254 CES4AQ5XG92 561 aa3.18□□□□□ -1.9
CALD1-224ENST00000498254 C16orf87Q6PH81 154 aa3.18□□□□□ -1.9
CALD1-224ENST00000498254 BHLHB9Q6PI77 547 aa3.18□□□□□ -1.9
CALD1-224ENST00000498254 TRIM65Q6PJ69 517 aa3.18□□□□□ -1.9
CALD1-224ENST00000498254 FAM159AQ6UWV7 190 aa3.18□□□□□ -1.9
CALD1-224ENST00000498254 ARSKQ6UWY0 536 aa3.18□□□□□ -1.9
CALD1-224ENST00000498254 ABRAXAS1Q6UWZ7 409 aa3.18□□□□□ -1.9
CALD1-224ENST00000498254 NR2C2APQ86WQ0 139 aa3.18□□□□□ -1.9
CALD1-224ENST00000498254 ZNF573Q86YE8 665 aa3.18□□□□□ -1.9
CALD1-224ENST00000498254 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.18□□□□□ -1.9
CALD1-224ENST00000498254 DCLK2Q8N568 766 aa3.18□□□□□ -1.9
CALD1-224ENST00000498254 BCORP1Q8N888 145 aa3.18□□□□□ -1.9
CALD1-224ENST00000498254 MAPK15Q8TD08 544 aa3.18□□□□□ -1.9
CALD1-224ENST00000498254 LIPHQ8WWY8 451 aa3.18□□□□□ -1.9
CALD1-224ENST00000498254 HIST1H2ACQ93077 130 aa3.18□□□□□ -1.9
CALD1-224ENST00000498254 MCHR2Q969V1 340 aa3.18□□□□□ -1.9
CALD1-224ENST00000498254 RAB7BQ96AH8 199 aa3.18□□□□□ -1.9
CALD1-224ENST00000498254 FAM210AQ96ND0 272 aa3.18□□□□□ -1.9
CALD1-224ENST00000498254 NODALQ96S42 347 aa3.18□□□□□ -1.9
CALD1-224ENST00000498254 KRT12Q99456 494 aa3.18□□□□□ -1.9
CALD1-224ENST00000498254 FUCA2Q9BTY2 467 aa3.18□□□□□ -1.9
CALD1-224ENST00000498254 CCDC94Q9BW85 323 aaPredicted RBP3.18□□□□□ -1.9
CALD1-224ENST00000498254 PAPOLGQ9BWT3 736 aaKnown RBP3.18□□□□□ -1.9
CALD1-224ENST00000498254 DGCR6LQ9BY27 220 aa3.18□□□□□ -1.9
CALD1-224ENST00000498254 ZNF556Q9HAH1 456 aa3.18□□□□□ -1.9
CALD1-224ENST00000498254 KCNK13Q9HB14 408 aa3.18□□□□□ -1.9
CALD1-224ENST00000498254 GTSE1Q9NYZ3 720 aa3.18□□□□□ -1.9
CALD1-224ENST00000498254 VPS54Q9P1Q0 977 aa3.18□□□□□ -1.9
CALD1-224ENST00000498254 BAIAP2L1Q9UHR4 511 aa3.18□□□□□ -1.9
CALD1-224ENST00000498254 RABL2BQ9UNT1 228 aa3.18□□□□□ -1.9
CALD1-224ENST00000498254 PPP1R3CQ9UQK1 317 aa3.18□□□□□ -1.9
CALD1-224ENST00000498254 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.18□□□□□ -1.9
CALD1-224ENST00000498254 U3KQV3 271 aa3.18□□□□□ -1.9
CALD1-224ENST00000498254 RNF123Q5XPI4 1314 aa3.18□□□□□ -1.9
CALD1-224ENST00000498254 UNC13AQ9UPW8 1703 aa3.17□□□□□ -1.9
CALD1-224ENST00000498254 ANKRD30BLA7E2S9 258 aa3.17□□□□□ -1.9
CALD1-224ENST00000498254 BLOC1S5-TXNDC5H3BN57 136 aa3.17□□□□□ -1.9
CALD1-224ENST00000498254 BMPR1BO00238 502 aa3.17□□□□□ -1.9
CALD1-224ENST00000498254 CHEK1O14757 476 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms