RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 TRIM6Q9C030 488 aaPredicted RBP2.26□□□□□ -2.05
CKS1BP2-201ENST00000497342 EGLN1Q9GZT9 426 aa2.26□□□□□ -2.05
CKS1BP2-201ENST00000497342 RAB33BQ9H082 229 aa2.26□□□□□ -2.05
CKS1BP2-201ENST00000497342 RAB17Q9H0T7 212 aa2.26□□□□□ -2.05
CKS1BP2-201ENST00000497342 RPF1Q9H9Y2 349 aaKnown RBP2.26□□□□□ -2.05
CKS1BP2-201ENST00000497342 UPF2Q9HAU5 1272 aaKnown RBP2.26□□□□□ -2.05
CKS1BP2-201ENST00000497342 ACKR4Q9NPB9 350 aa2.26□□□□□ -2.05
CKS1BP2-201ENST00000497342 FANCFQ9NPI8 374 aa2.26□□□□□ -2.05
CKS1BP2-201ENST00000497342 ACOXLQ9NUZ1 547 aa2.26□□□□□ -2.05
CKS1BP2-201ENST00000497342 OSER1Q9NX31 292 aa2.26□□□□□ -2.05
CKS1BP2-201ENST00000497342 MSRB1Q9NZV6 116 aa2.26□□□□□ -2.05
CKS1BP2-201ENST00000497342 B3GAT1Q9P2W7 334 aa2.26□□□□□ -2.05
CKS1BP2-201ENST00000497342 ATXN10Q9UBB4 475 aa2.26□□□□□ -2.05
CKS1BP2-201ENST00000497342 MALT1Q9UDY8 824 aa2.26□□□□□ -2.05
CKS1BP2-201ENST00000497342 AGO1Q9UL18 857 aaKnown RBP2.26□□□□□ -2.05
CKS1BP2-201ENST00000497342 WDR83OSQ9Y284 106 aa2.26□□□□□ -2.05
CKS1BP2-201ENST00000497342 ZNF510Q9Y2H8 683 aa2.26□□□□□ -2.05
CKS1BP2-201ENST00000497342 EML5Q05BV3 1969 aa2.26□□□□□ -2.05
CKS1BP2-201ENST00000497342 PRRC2AP48634 2157 aaKnown RBP2.26□□□□□ -2.05
CKS1BP2-201ENST00000497342 LRRK1Q38SD2 2015 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 MYH7BA7E2Y1 1941 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 NRCAMQ92823 1304 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 TEX13DA0A0J9YY54 714 aaPredicted RBP2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 ZCWPW2A0A1B0GU75 182 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 MACROD2A1Z1Q3 448 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 MAGEB16A2A368 324 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 XKRY2A2RUG3 117 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 OR5K3A6NET4 321 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 ASB14A6NK59 587 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 DBX1A6NMT0 343 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 I6L893 689 aaPredicted RBP2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 MAGEB3O15480 346 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 TEX28O15482 410 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 NUDT21O43809 227 aaKnown RBP2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 ZIC3O60481 467 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 CSO75390 466 aaKnown RBP2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 FLOT1O75955 427 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 MFN2O95140 757 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 OR6A2O95222 327 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 GSRP00390 522 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 PRKCGP05129 697 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 APRTP07741 180 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 IGHV4-30-4P0DP06 118 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 IRF2P14316 349 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 NCF1P14598 390 aaPredicted RBP2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 NR1D1P20393 614 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 MAKP20794 623 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 PROZP22891 400 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 ARHGAP25P42331 645 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 TNFRSF4P43489 277 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 OR3A3P47888 321 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 UQCRFS1P47985 274 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 SLC6A8P48029 635 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 ACADVLP49748 655 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 MXI1P50539 228 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 VAMP7P51809 220 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 C21orf58P58505 322 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 BRWD1-AS2P59051 145 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 RPP38P78345 283 aaKnown RBP2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 COG7P83436 770 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 CNTN2Q02246 1040 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 KLC1Q07866 573 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 PRKAA1Q13131 559 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 SNX1Q13596 522 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 GIT2Q14161 759 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 KARSQ15046 597 aaKnown RBP2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 MCMDC2Q4G0Z9 681 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 IFI44LQ53G44 452 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 EFHC1Q5JVL4 640 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 ATAD3BQ5T9A4 648 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 HECTD2Q5U5R9 776 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 CAPRIN2Q6IMN6 1127 aaKnown RBP2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 C11orf63Q6NUN7 778 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 C8orf82Q6P1X6 216 aaPredicted RBP2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 METAP1DQ6UB28 335 aaPredicted RBP2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 CES3Q6UWW8 571 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 PLXDC2Q6UX71 529 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 WDR88Q6ZMY6 472 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 CCDC73Q6ZRK6 1079 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 SLC16A12Q6ZSM3 486 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 LCNL1Q6ZST4 164 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 CYP4V2Q6ZWL3 525 aaPredicted RBP2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 TMEM126BQ8IUX1 230 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 CCDC60Q8IWA6 550 aaPredicted RBP2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 FBXO16Q8IX29 292 aaPredicted RBP2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 DSELQ8IZU8 1212 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 NAGSQ8N159 534 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 PNLDC1Q8NA58 520 aaKnown RBP2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 ACVR1CQ8NER5 493 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 OR56B2PQ8NGI1 322 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 OR52I2Q8NH67 350 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 SPATA22Q8NHS9 363 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 BRSK1Q8TDC3 778 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 RNF128Q8TEB7 428 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 RLN3Q8WXF3 142 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 SYN2Q92777 582 aaPredicted RBP2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 INPP5DQ92835 1189 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 SEMA4DQ92854 862 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 WBP2Q969T9 261 aa2.25□□□□□ -2.05
CKS1BP2-201ENST00000497342 NCLNQ969V3 563 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms