RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 OR4F3Q6IEY1 312 aa17.18■□□□□ 0.34
RGP1-202ENST00000496906 FAM180BQ6P0A1 224 aa17.18■□□□□ 0.34
RGP1-202ENST00000496906 SNX32Q86XE0 403 aa17.18■□□□□ 0.34
RGP1-202ENST00000496906 SCUBE1Q8IWY4 988 aa17.18■□□□□ 0.34
RGP1-202ENST00000496906 ESX1Q8N693 406 aa17.18■□□□□ 0.34
RGP1-202ENST00000496906 RP9Q8TA86 221 aaKnown RBP17.18■□□□□ 0.34
RGP1-202ENST00000496906 VPS33AQ96AX1 596 aa17.18■□□□□ 0.34
RGP1-202ENST00000496906 SLC25A23Q9BV35 468 aa17.18■□□□□ 0.34
RGP1-202ENST00000496906 SLC35C2Q9NQQ7 365 aa17.18■□□□□ 0.34
RGP1-202ENST00000496906 PRTFDC1Q9NRG1 225 aa17.18■□□□□ 0.34
RGP1-202ENST00000496906 ACSL6Q9UKU0 697 aa17.18■□□□□ 0.34
RGP1-202ENST00000496906 MMACHCQ9Y4U1 282 aa17.18■□□□□ 0.34
RGP1-202ENST00000496906 LOC100653049A0A140TA62 436 aa17.17■□□□□ 0.34
RGP1-202ENST00000496906 DYTNA2CJ06 578 aa17.17■□□□□ 0.34
RGP1-202ENST00000496906 CCDC154A6NI56 674 aa17.17■□□□□ 0.34
RGP1-202ENST00000496906 CCT8L1PA6NM43 557 aa17.17■□□□□ 0.34
RGP1-202ENST00000496906 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.17■□□□□ 0.34
RGP1-202ENST00000496906 C9J4A7 227 aa17.17■□□□□ 0.34
RGP1-202ENST00000496906 STMND1H3BQB6 276 aa17.17■□□□□ 0.34
RGP1-202ENST00000496906 CTNSO60931 367 aa17.17■□□□□ 0.34
RGP1-202ENST00000496906 SCN2BO60939 215 aa17.17■□□□□ 0.34
RGP1-202ENST00000496906 ERAL1O75616 437 aaKnown RBP17.17■□□□□ 0.34
RGP1-202ENST00000496906 KRT34O76011 436 aa17.17■□□□□ 0.34
RGP1-202ENST00000496906 CCNYL3P0C7X3 344 aa17.17■□□□□ 0.34
RGP1-202ENST00000496906 COX4I1P13073 169 aa17.17■□□□□ 0.34
RGP1-202ENST00000496906 PRDX6P30041 224 aa17.17■□□□□ 0.34
RGP1-202ENST00000496906 PPP2R1BP30154 601 aa17.17■□□□□ 0.34
RGP1-202ENST00000496906 EFNA3P52797 238 aa17.17■□□□□ 0.34
RGP1-202ENST00000496906 HSD17B7P56937 341 aa17.17■□□□□ 0.34
RGP1-202ENST00000496906 BTG2P78543 158 aa17.17■□□□□ 0.34
RGP1-202ENST00000496906 CYLC2Q14093 348 aaPredicted RBP17.17■□□□□ 0.34
RGP1-202ENST00000496906 KRT72Q14CN4 511 aa17.17■□□□□ 0.34
RGP1-202ENST00000496906 NCF4Q15080 339 aa17.17■□□□□ 0.34
RGP1-202ENST00000496906 CEBPEQ15744 281 aa17.17■□□□□ 0.34
RGP1-202ENST00000496906 QSOX2Q6ZRP7 698 aa17.17■□□□□ 0.34
RGP1-202ENST00000496906 OR4N5Q8IXE1 308 aa17.17■□□□□ 0.34
RGP1-202ENST00000496906 NLGN4XQ8N0W4 816 aa17.17■□□□□ 0.34
RGP1-202ENST00000496906 POU5F2Q8N7G0 328 aa17.17■□□□□ 0.34
RGP1-202ENST00000496906 NLGN4YQ8NFZ3 816 aaPredicted RBP17.17■□□□□ 0.34
RGP1-202ENST00000496906 OR4K14Q8NGD5 310 aa17.17■□□□□ 0.34
RGP1-202ENST00000496906 CIDECQ96AQ7 238 aaPredicted RBP17.17■□□□□ 0.34
RGP1-202ENST00000496906 ANKRD9Q96BM1 317 aaPredicted RBP17.17■□□□□ 0.34
RGP1-202ENST00000496906 MIEF2Q96C03 454 aa17.17■□□□□ 0.34
RGP1-202ENST00000496906 CNRIP1Q96F85 164 aaPredicted RBP17.17■□□□□ 0.34
RGP1-202ENST00000496906 SPSB2Q99619 263 aa17.17■□□□□ 0.34
RGP1-202ENST00000496906 SCNM1Q9BWG6 230 aa17.17■□□□□ 0.34
RGP1-202ENST00000496906 WDR54Q9H977 334 aa17.17■□□□□ 0.34
RGP1-202ENST00000496906 ARL8BQ9NVJ2 186 aa17.17■□□□□ 0.34
RGP1-202ENST00000496906 CLDN16Q9Y5I7 305 aa17.17■□□□□ 0.34
RGP1-202ENST00000496906 AHCTF1Q8WYP5 2266 aa17.16■□□□□ 0.34
RGP1-202ENST00000496906 A0A1W2PP18 115 aa17.16■□□□□ 0.34
RGP1-202ENST00000496906 A0A1W2PS29 197 aa17.16■□□□□ 0.34
RGP1-202ENST00000496906 ASPDHA6ND91 283 aa17.16■□□□□ 0.34
RGP1-202ENST00000496906 OR2W5A6NFC9 320 aa17.16■□□□□ 0.34
RGP1-202ENST00000496906 TGFBR3LH3BV60 316 aa17.16■□□□□ 0.34
RGP1-202ENST00000496906 CFLARO15519 480 aa17.16■□□□□ 0.34
RGP1-202ENST00000496906 PDPK1O15530 556 aa17.16■□□□□ 0.34
RGP1-202ENST00000496906 BRINP1O60477 761 aa17.16■□□□□ 0.34
RGP1-202ENST00000496906 RAD1O60671 282 aa17.16■□□□□ 0.34
RGP1-202ENST00000496906 GPR75O95800 540 aa17.16■□□□□ 0.34
RGP1-202ENST00000496906 FRKP42685 505 aaPredicted RBP17.16■□□□□ 0.34
RGP1-202ENST00000496906 PCBP4P57723 403 aaKnown RBP17.16■□□□□ 0.34
RGP1-202ENST00000496906 FOXL2P58012 376 aa17.16■□□□□ 0.34
RGP1-202ENST00000496906 RHAGQ02094 409 aa17.16■□□□□ 0.34
RGP1-202ENST00000496906 SLC13A2Q13183 592 aa17.16■□□□□ 0.34
RGP1-202ENST00000496906 MINDY4Q4G0A6 757 aa17.16■□□□□ 0.34
RGP1-202ENST00000496906 PRSS58Q8IYP2 241 aa17.16■□□□□ 0.34
RGP1-202ENST00000496906 NATD1Q8N6N6 113 aa17.16■□□□□ 0.34
RGP1-202ENST00000496906 NXPE2Q96DL1 559 aa17.16■□□□□ 0.34
RGP1-202ENST00000496906 CMTM5Q96DZ9 223 aa17.16■□□□□ 0.34
RGP1-202ENST00000496906 ZNF681Q96N22 645 aa17.16■□□□□ 0.34
RGP1-202ENST00000496906 OR52E6Q96RD3 313 aa17.16■□□□□ 0.34
RGP1-202ENST00000496906 SLAMF7Q9NQ25 335 aa17.16■□□□□ 0.34
RGP1-202ENST00000496906 THSD1Q9NS62 852 aa17.16■□□□□ 0.34
RGP1-202ENST00000496906 GIMAP4Q9NUV9 329 aa17.16■□□□□ 0.34
RGP1-202ENST00000496906 FAM120CQ9NX05 1096 aaKnown RBP17.16■□□□□ 0.34
RGP1-202ENST00000496906 GPN3Q9UHW5 284 aaPredicted RBP17.16■□□□□ 0.34
RGP1-202ENST00000496906 NXT1Q9UKK6 140 aaKnown RBP17.16■□□□□ 0.34
RGP1-202ENST00000496906 ENTPD4Q9Y227 616 aa17.16■□□□□ 0.34
RGP1-202ENST00000496906 TRABD2BA6NFA1 517 aa17.15■□□□□ 0.34
RGP1-202ENST00000496906 RNASET2O00584 256 aaKnown RBP17.15■□□□□ 0.34
RGP1-202ENST00000496906 RECKO95980 971 aa17.15■□□□□ 0.34
RGP1-202ENST00000496906 C8orf89P0DMQ9 161 aa17.15■□□□□ 0.34
RGP1-202ENST00000496906 SPINK2P20155 84 aa17.15■□□□□ 0.34
RGP1-202ENST00000496906 MAOAP21397 527 aa17.15■□□□□ 0.34
RGP1-202ENST00000496906 IGLV3-21P80748 117 aaPredicted RBP17.15■□□□□ 0.34
RGP1-202ENST00000496906 ID2Q02363 134 aa17.15■□□□□ 0.34
RGP1-202ENST00000496906 TLR1Q15399 786 aa17.15■□□□□ 0.34
RGP1-202ENST00000496906 ZNF750Q32MQ0 723 aa17.15■□□□□ 0.34
RGP1-202ENST00000496906 MFSD4BQ5TF39 518 aa17.15■□□□□ 0.34
RGP1-202ENST00000496906 MSANTD1Q6ZTZ1 278 aa17.15■□□□□ 0.34
RGP1-202ENST00000496906 LAPTM4BQ86VI4 370 aa17.15■□□□□ 0.34
RGP1-202ENST00000496906 SAMD14Q8IZD0 417 aaPredicted RBP17.15■□□□□ 0.34
RGP1-202ENST00000496906 CT55Q8WUE5 264 aa17.15■□□□□ 0.34
RGP1-202ENST00000496906 VN1R1Q9GZP7 353 aa17.15■□□□□ 0.34
RGP1-202ENST00000496906 SOX17Q9H6I2 414 aaPredicted RBP17.15■□□□□ 0.34
RGP1-202ENST00000496906 MKL2Q9ULH7 1088 aa17.15■□□□□ 0.34
RGP1-202ENST00000496906 AK5Q9Y6K8 562 aa17.15■□□□□ 0.34
RGP1-202ENST00000496906 ZNF780BQ9Y6R6 833 aa17.15■□□□□ 0.34
RGP1-202ENST00000496906 NUP210LQ5VU65 1888 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms