RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 ANKRD20A1Q5TYW2 823 aa2.82□□□□□ -1.96
CD46-218ENST00000496723 ANKRD20A3Q5VUR7 823 aa2.82□□□□□ -1.96
CD46-218ENST00000496723 THEM5Q8N1Q8 247 aa2.82□□□□□ -1.96
CD46-218ENST00000496723 GOT1L1Q8NHS2 421 aaPredicted RBP2.82□□□□□ -1.96
CD46-218ENST00000496723 MRAPQ8TCY5 172 aa2.82□□□□□ -1.96
CD46-218ENST00000496723 ESAMQ96AP7 390 aa2.82□□□□□ -1.96
CD46-218ENST00000496723 ULK4Q96C45 1275 aa2.82□□□□□ -1.96
CD46-218ENST00000496723 AP2M1Q96CW1 435 aa2.82□□□□□ -1.96
CD46-218ENST00000496723 PCED1BQ96HM7 432 aa2.82□□□□□ -1.96
CD46-218ENST00000496723 CNOT6LQ96LI5 555 aaKnown RBP2.82□□□□□ -1.96
CD46-218ENST00000496723 RAB40CQ96S21 281 aa2.82□□□□□ -1.96
CD46-218ENST00000496723 UTP14AQ9BVJ6 771 aaKnown RBP2.82□□□□□ -1.96
CD46-218ENST00000496723 ACPTQ9BZG2 426 aa2.82□□□□□ -1.96
CD46-218ENST00000496723 MIS18AQ9NYP9 233 aa2.82□□□□□ -1.96
CD46-218ENST00000496723 PSORS1C1Q9UIG5 152 aa2.82□□□□□ -1.96
CD46-218ENST00000496723 ITM2BQ9Y287 266 aa2.82□□□□□ -1.96
CD46-218ENST00000496723 SLC6A5Q9Y345 797 aa2.82□□□□□ -1.96
CD46-218ENST00000496723 ACEP12821 1306 aa2.82□□□□□ -1.96
CD46-218ENST00000496723 PSMA7O14818 248 aa2.81□□□□□ -1.96
CD46-218ENST00000496723 LRRTM2O43300 516 aa2.81□□□□□ -1.96
CD46-218ENST00000496723 KIAA0513O60268 411 aa2.81□□□□□ -1.96
CD46-218ENST00000496723 DUSP11O75319 330 aaKnown RBP2.81□□□□□ -1.96
CD46-218ENST00000496723 CSDE1O75534 798 aaKnown RBP2.81□□□□□ -1.96
CD46-218ENST00000496723 PIGRP01833 764 aa2.81□□□□□ -1.96
CD46-218ENST00000496723 DUX4L4P0CJ87 422 aa2.81□□□□□ -1.96
CD46-218ENST00000496723 IST1P53990 364 aa2.81□□□□□ -1.96
CD46-218ENST00000496723 ST8SIA6P61647 398 aa2.81□□□□□ -1.96
CD46-218ENST00000496723 PPIAP62937 165 aaKnown RBP2.81□□□□□ -1.96
CD46-218ENST00000496723 GSTO1P78417 241 aa2.81□□□□□ -1.96
CD46-218ENST00000496723 MFGE8Q08431 387 aaPredicted RBP2.81□□□□□ -1.96
CD46-218ENST00000496723 SCARB2Q14108 478 aa2.81□□□□□ -1.96
CD46-218ENST00000496723 CRMP1Q14194 572 aa2.81□□□□□ -1.96
CD46-218ENST00000496723 ABRAXAS2Q15018 415 aa2.81□□□□□ -1.96
CD46-218ENST00000496723 MEP1BQ16820 701 aa2.81□□□□□ -1.96
CD46-218ENST00000496723 TIMM50Q3ZCQ8 353 aa2.81□□□□□ -1.96
CD46-218ENST00000496723 FHL5Q5TD97 284 aa2.81□□□□□ -1.96
CD46-218ENST00000496723 OTOAQ7RTW8 1153 aa2.81□□□□□ -1.96
CD46-218ENST00000496723 ASPGQ86U10 573 aa2.81□□□□□ -1.96
CD46-218ENST00000496723 SIAH3Q8IW03 269 aa2.81□□□□□ -1.96
CD46-218ENST00000496723 CCDC83Q8IWF9 413 aa2.81□□□□□ -1.96
CD46-218ENST00000496723 TRPV3Q8NET8 790 aa2.81□□□□□ -1.96
CD46-218ENST00000496723 BEST4Q8NFU0 473 aa2.81□□□□□ -1.96
CD46-218ENST00000496723 PRCCQ92733 491 aaPredicted RBP2.81□□□□□ -1.96
CD46-218ENST00000496723 GGHQ92820 318 aa2.81□□□□□ -1.96
CD46-218ENST00000496723 TEKT1Q969V4 418 aa2.81□□□□□ -1.96
CD46-218ENST00000496723 MRPL24Q96A35 216 aaKnown RBP2.81□□□□□ -1.96
CD46-218ENST00000496723 PANX3Q96QZ0 392 aa2.81□□□□□ -1.96
CD46-218ENST00000496723 SSX3Q99909 188 aa2.81□□□□□ -1.96
CD46-218ENST00000496723 SLITRK2Q9H156 845 aa2.81□□□□□ -1.96
CD46-218ENST00000496723 GRPEL1Q9HAV7 217 aa2.81□□□□□ -1.96
CD46-218ENST00000496723 DNAJC17Q9NVM6 304 aaKnown RBP2.81□□□□□ -1.96
CD46-218ENST00000496723 B4GALT7Q9UBV7 327 aa2.81□□□□□ -1.96
CD46-218ENST00000496723 A4D1N5 150 aa2.8□□□□□ -1.96
CD46-218ENST00000496723 FAM149AA5PLN7 773 aa2.8□□□□□ -1.96
CD46-218ENST00000496723 ZNF487B1APH4 448 aa2.8□□□□□ -1.96
CD46-218ENST00000496723 SLC33A1O00400 549 aaPredicted RBP2.8□□□□□ -1.96
CD46-218ENST00000496723 E2F3O00716 465 aa2.8□□□□□ -1.96
CD46-218ENST00000496723 TTI1O43156 1089 aa2.8□□□□□ -1.96
CD46-218ENST00000496723 ANXA9O76027 345 aa2.8□□□□□ -1.96
CD46-218ENST00000496723 IGHG3P01860 377 aa2.8□□□□□ -1.96
CD46-218ENST00000496723 CCDC159P0C7I6 412 aa2.8□□□□□ -1.96
CD46-218ENST00000496723 UMPSP11172 480 aa2.8□□□□□ -1.96
CD46-218ENST00000496723 FOSL2P15408 326 aa2.8□□□□□ -1.96
CD46-218ENST00000496723 GPX3P22352 226 aa2.8□□□□□ -1.96
CD46-218ENST00000496723 NAAAQ02083 359 aa2.8□□□□□ -1.96
CD46-218ENST00000496723 GABPAQ06546 454 aa2.8□□□□□ -1.96
CD46-218ENST00000496723 PRR30Q53SZ7 412 aaPredicted RBP2.8□□□□□ -1.96
CD46-218ENST00000496723 DCAF12Q5T6F0 453 aa2.8□□□□□ -1.96
CD46-218ENST00000496723 MARC1Q5VT66 337 aa2.8□□□□□ -1.96
CD46-218ENST00000496723 ARMC3Q5W041 872 aa2.8□□□□□ -1.96
CD46-218ENST00000496723 CCBE1Q6UXH8 406 aaPredicted RBP2.8□□□□□ -1.96
CD46-218ENST00000496723 C17orf64Q86WR6 236 aa2.8□□□□□ -1.96
CD46-218ENST00000496723 WDR49Q8IV35 697 aa2.8□□□□□ -1.96
CD46-218ENST00000496723 HSCBQ8IWL3 235 aa2.8□□□□□ -1.96
CD46-218ENST00000496723 CLYBLQ8N0X4 340 aa2.8□□□□□ -1.96
CD46-218ENST00000496723 GVQW1Q8N7I0 195 aa2.8□□□□□ -1.96
CD46-218ENST00000496723 ICA1LQ8NDH6 482 aa2.8□□□□□ -1.96
CD46-218ENST00000496723 OR1K1Q8NGR3 316 aa2.8□□□□□ -1.96
CD46-218ENST00000496723 C16orf58Q96GQ5 468 aa2.8□□□□□ -1.96
CD46-218ENST00000496723 RBM18Q96H35 190 aaKnown RBP2.8□□□□□ -1.96
CD46-218ENST00000496723 MCCC1Q96RQ3 725 aaPredicted RBP2.8□□□□□ -1.96
CD46-218ENST00000496723 ADPGKQ9BRR6 497 aa2.8□□□□□ -1.96
CD46-218ENST00000496723 WWP1Q9H0M0 922 aa2.8□□□□□ -1.96
CD46-218ENST00000496723 DPEP3Q9H4B8 488 aa2.8□□□□□ -1.96
CD46-218ENST00000496723 ZWILCHQ9H900 591 aa2.8□□□□□ -1.96
CD46-218ENST00000496723 ERVK-19Q9WJR5 959 aa2.8□□□□□ -1.96
CD46-218ENST00000496723 C13orf42A0A1B0GVH6 325 aa2.79□□□□□ -1.96
CD46-218ENST00000496723 FAM168BA1KXE4 195 aa2.79□□□□□ -1.96
CD46-218ENST00000496723 MCF2LO15068 1137 aa2.79□□□□□ -1.96
CD46-218ENST00000496723 STX6O43752 255 aa2.79□□□□□ -1.96
CD46-218ENST00000496723 EPOP01588 193 aa2.79□□□□□ -1.96
CD46-218ENST00000496723 HSP90AB1P08238 724 aaKnown RBP2.79□□□□□ -1.96
CD46-218ENST00000496723 HSD17B1P14061 328 aa2.79□□□□□ -1.96
CD46-218ENST00000496723 CPA3P15088 417 aa2.79□□□□□ -1.96
CD46-218ENST00000496723 SERPINB6P35237 376 aa2.79□□□□□ -1.96
CD46-218ENST00000496723 HMGCS2P54868 508 aa2.79□□□□□ -1.96
CD46-218ENST00000496723 TRA2BP62995 288 aaKnown RBP2.79□□□□□ -1.96
CD46-218ENST00000496723 YWHAHQ04917 246 aaPredicted RBP2.79□□□□□ -1.96
CD46-218ENST00000496723 LCP2Q13094 533 aa2.79□□□□□ -1.96
CD46-218ENST00000496723 MEF2DQ14814 521 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms