RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 SSPNQ14714 243 aa20.44■□□□□ 0.86
C9orf3-222ENST00000496567 TICAM1Q8IUC6 712 aa20.44■□□□□ 0.86
C9orf3-222ENST00000496567 SAMD14Q8IZD0 417 aaPredicted RBP20.44■□□□□ 0.86
C9orf3-222ENST00000496567 MIER2Q8N344 545 aa20.44■□□□□ 0.86
C9orf3-222ENST00000496567 OR4K14Q8NGD5 310 aa20.44■□□□□ 0.86
C9orf3-222ENST00000496567 UCN3Q969E3 161 aa20.44■□□□□ 0.86
C9orf3-222ENST00000496567 TAS2R7Q9NYW3 318 aa20.44■□□□□ 0.86
C9orf3-222ENST00000496567 ZIM2Q9NZV7 527 aa20.44■□□□□ 0.86
C9orf3-222ENST00000496567 UTS2RQ9UKP6 389 aa20.44■□□□□ 0.86
C9orf3-222ENST00000496567 EXO1Q9UQ84 846 aaKnown RBP20.44■□□□□ 0.86
C9orf3-222ENST00000496567 ANKRD28O15084 1053 aa20.43■□□□□ 0.86
C9orf3-222ENST00000496567 SCAMP2O15127 329 aaKnown RBP20.43■□□□□ 0.86
C9orf3-222ENST00000496567 LDB3O75112 727 aa20.43■□□□□ 0.86
C9orf3-222ENST00000496567 ALOX12BO75342 701 aa20.43■□□□□ 0.86
C9orf3-222ENST00000496567 CAPNS1P04632 268 aa20.43■□□□□ 0.86
C9orf3-222ENST00000496567 UMODP07911 640 aa20.43■□□□□ 0.86
C9orf3-222ENST00000496567 MAOAP21397 527 aa20.43■□□□□ 0.86
C9orf3-222ENST00000496567 FOXL2P58012 376 aa20.43■□□□□ 0.86
C9orf3-222ENST00000496567 RPS18P62269 152 aaKnown RBP20.43■□□□□ 0.86
C9orf3-222ENST00000496567 FOLH1Q04609 750 aa20.43■□□□□ 0.86
C9orf3-222ENST00000496567 GABPB1Q06547 395 aaPredicted RBP20.43■□□□□ 0.86
C9orf3-222ENST00000496567 PDE7AQ13946 482 aa20.43■□□□□ 0.86
C9orf3-222ENST00000496567 SERTAD2Q14140 314 aa20.43■□□□□ 0.86
C9orf3-222ENST00000496567 TERF2Q15554 542 aa20.43■□□□□ 0.86
C9orf3-222ENST00000496567 NSDHLQ15738 373 aa20.43■□□□□ 0.86
C9orf3-222ENST00000496567 GKAP1Q5VSY0 366 aaPredicted RBP20.43■□□□□ 0.86
C9orf3-222ENST00000496567 UNQ6494/PRO21346Q6UXR6 183 aa20.43■□□□□ 0.86
C9orf3-222ENST00000496567 VASH2Q86V25 355 aa20.43■□□□□ 0.86
C9orf3-222ENST00000496567 RIMKLAQ8IXN7 391 aa20.43■□□□□ 0.86
C9orf3-222ENST00000496567 NACC2Q96BF6 587 aa20.43■□□□□ 0.86
C9orf3-222ENST00000496567 PPCDCQ96CD2 204 aa20.43■□□□□ 0.86
C9orf3-222ENST00000496567 KLHL29Q96CT2 875 aa20.43■□□□□ 0.86
C9orf3-222ENST00000496567 ZBTB18Q99592 522 aa20.43■□□□□ 0.86
C9orf3-222ENST00000496567 GIMAP4Q9NUV9 329 aa20.43■□□□□ 0.86
C9orf3-222ENST00000496567 IL17BQ9UHF5 180 aa20.43■□□□□ 0.86
C9orf3-222ENST00000496567 ATP6V1HQ9UI12 483 aa20.43■□□□□ 0.86
C9orf3-222ENST00000496567 ZNF780BQ9Y6R6 833 aa20.43■□□□□ 0.86
C9orf3-222ENST00000496567 NCOR2Q9Y618 2525 aa20.43■□□□□ 0.86
C9orf3-222ENST00000496567 SCN2AQ99250 2005 aa20.43■□□□□ 0.86
C9orf3-222ENST00000496567 IGKV3D-11A0A0A0MRZ8 115 aa20.42■□□□□ 0.86
C9orf3-222ENST00000496567 OR2W5A6NFC9 320 aa20.42■□□□□ 0.86
C9orf3-222ENST00000496567 KLK10O43240 276 aa20.42■□□□□ 0.86
C9orf3-222ENST00000496567 FGF17O60258 216 aa20.42■□□□□ 0.86
C9orf3-222ENST00000496567 ERAL1O75616 437 aaKnown RBP20.42■□□□□ 0.86
C9orf3-222ENST00000496567 CREG1O75629 220 aa20.42■□□□□ 0.86
C9orf3-222ENST00000496567 SLC22A3O75751 556 aa20.42■□□□□ 0.86
C9orf3-222ENST00000496567 C8orf89P0DMQ9 161 aa20.42■□□□□ 0.86
C9orf3-222ENST00000496567 COX7A2P14406 83 aa20.42■□□□□ 0.86
C9orf3-222ENST00000496567 SQLEQ14534 574 aa20.42■□□□□ 0.86
C9orf3-222ENST00000496567 KRTCAP2Q8N6L1 136 aa20.42■□□□□ 0.86
C9orf3-222ENST00000496567 GLB1L3Q8NCI6 653 aaPredicted RBP20.42■□□□□ 0.86
C9orf3-222ENST00000496567 ANKRD9Q96BM1 317 aaPredicted RBP20.42■□□□□ 0.86
C9orf3-222ENST00000496567 NECTIN3Q9NQS3 549 aa20.42■□□□□ 0.86
C9orf3-222ENST00000496567 ATAD3AQ9NVI7 634 aa20.42■□□□□ 0.86
C9orf3-222ENST00000496567 SH3BP4Q9P0V3 963 aa20.42■□□□□ 0.86
C9orf3-222ENST00000496567 C5AR2Q9P296 337 aa20.42■□□□□ 0.86
C9orf3-222ENST00000496567 C19orf25Q9UFG5 118 aaPredicted RBP20.42■□□□□ 0.86
C9orf3-222ENST00000496567 COPG1Q9Y678 874 aaKnown RBP20.42■□□□□ 0.86
C9orf3-222ENST00000496567 CCDC88CQ9P219 2028 aa20.42■□□□□ 0.86
C9orf3-222ENST00000496567 WASHC1A8K0Z3 465 aa20.42■□□□□ 0.86
C9orf3-222ENST00000496567 GABRR3A8MPY1 467 aa20.42■□□□□ 0.86
C9orf3-222ENST00000496567 RRP8O43159 456 aaKnown RBP20.42■□□□□ 0.86
C9orf3-222ENST00000496567 MMP11P24347 488 aa20.42■□□□□ 0.86
C9orf3-222ENST00000496567 NME5P56597 212 aa20.42■□□□□ 0.86
C9orf3-222ENST00000496567 UFM1P61960 85 aa20.42■□□□□ 0.86
C9orf3-222ENST00000496567 IGLV3-21P80748 117 aaPredicted RBP20.42■□□□□ 0.86
C9orf3-222ENST00000496567 DPY19L1Q2PZI1 675 aa20.42■□□□□ 0.86
C9orf3-222ENST00000496567 FAM69BQ5VUD6 431 aa20.42■□□□□ 0.86
C9orf3-222ENST00000496567 OR4N5Q8IXE1 308 aa20.42■□□□□ 0.86
C9orf3-222ENST00000496567 EXOSC8Q96B26 276 aaKnown RBP20.42■□□□□ 0.86
C9orf3-222ENST00000496567 TESCQ96BS2 214 aa20.42■□□□□ 0.86
C9orf3-222ENST00000496567 SLC45A3Q96JT2 553 aa20.42■□□□□ 0.86
C9orf3-222ENST00000496567 ALOXE3Q9BYJ1 711 aa20.42■□□□□ 0.86
C9orf3-222ENST00000496567 SLC35C2Q9NQQ7 365 aa20.42■□□□□ 0.86
C9orf3-222ENST00000496567 TMEM45AQ9NWC5 275 aa20.42■□□□□ 0.86
C9orf3-222ENST00000496567 ENTPD4Q9Y227 616 aa20.42■□□□□ 0.86
C9orf3-222ENST00000496567 ARL2BPQ9Y2Y0 163 aa20.42■□□□□ 0.86
C9orf3-222ENST00000496567 MRPS18BQ9Y676 258 aaKnown RBP20.42■□□□□ 0.86
C9orf3-222ENST00000496567 TCRBV16S1A1N1A0A5B0 115 aa20.41■□□□□ 0.86
C9orf3-222ENST00000496567 C1QTNF9BB2RNN3 333 aa20.41■□□□□ 0.86
C9orf3-222ENST00000496567 C1QTNF9P0C862 333 aa20.41■□□□□ 0.86
C9orf3-222ENST00000496567 GPX3P22352 226 aa20.41■□□□□ 0.86
C9orf3-222ENST00000496567 EIF2S3P41091 472 aaKnown RBP20.41■□□□□ 0.86
C9orf3-222ENST00000496567 XKP51811 444 aa20.41■□□□□ 0.86
C9orf3-222ENST00000496567 EFNA3P52797 238 aa20.41■□□□□ 0.86
C9orf3-222ENST00000496567 SRSF11Q05519 484 aaKnown RBP20.41■□□□□ 0.86
C9orf3-222ENST00000496567 UGT8Q16880 541 aa20.41■□□□□ 0.86
C9orf3-222ENST00000496567 CPTPQ5TA50 214 aa20.41■□□□□ 0.86
C9orf3-222ENST00000496567 FAAH2Q6GMR7 532 aa20.41■□□□□ 0.86
C9orf3-222ENST00000496567 TMEM205Q6UW68 189 aa20.41■□□□□ 0.86
C9orf3-222ENST00000496567 RAB43Q86YS6 212 aa20.41■□□□□ 0.86
C9orf3-222ENST00000496567 NATD1Q8N6N6 113 aa20.41■□□□□ 0.86
C9orf3-222ENST00000496567 TSLPQ969D9 159 aa20.41■□□□□ 0.86
C9orf3-222ENST00000496567 VPS50Q96JG6 964 aa20.41■□□□□ 0.86
C9orf3-222ENST00000496567 CCNL2Q96S94 520 aaPredicted RBP20.41■□□□□ 0.86
C9orf3-222ENST00000496567 CLMPQ9H6B4 373 aa20.41■□□□□ 0.86
C9orf3-222ENST00000496567 CCDC22O60826 627 aa20.4■□□□□ 0.86
C9orf3-222ENST00000496567 CSNK2A2P19784 350 aaPredicted RBP20.4■□□□□ 0.86
C9orf3-222ENST00000496567 ID2Q02363 134 aa20.4■□□□□ 0.86
C9orf3-222ENST00000496567 CAMKMTQ7Z624 323 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms