RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 RPTNQ6XPR3 784 aa14.61□□□□□ -0.07
HDAC4-213ENST00000496347 TIFABQ6ZNK6 161 aa14.61□□□□□ -0.07
HDAC4-213ENST00000496347 GHDCQ8N2G8 530 aa14.61□□□□□ -0.07
HDAC4-213ENST00000496347 RNF175Q8N4F7 328 aa14.61□□□□□ -0.07
HDAC4-213ENST00000496347 CPSF7Q8N684 471 aaKnown RBP14.61□□□□□ -0.07
HDAC4-213ENST00000496347 OR5L2Q8NGL0 311 aa14.61□□□□□ -0.07
HDAC4-213ENST00000496347 UHMK1Q8TAS1 419 aaKnown RBP14.61□□□□□ -0.07
HDAC4-213ENST00000496347 ASB15Q8WXK1 588 aa14.61□□□□□ -0.07
HDAC4-213ENST00000496347 ATP6V1E2Q96A05 226 aa14.61□□□□□ -0.07
HDAC4-213ENST00000496347 DGAT2Q96PD7 388 aa14.61□□□□□ -0.07
HDAC4-213ENST00000496347 HPF1Q9NWY4 346 aa14.61□□□□□ -0.07
HDAC4-213ENST00000496347 ATG4BQ9Y4P1 393 aa14.61□□□□□ -0.07
HDAC4-213ENST00000496347 DNAJC13O75165 2243 aa14.6□□□□□ -0.07
HDAC4-213ENST00000496347 ZNF407Q9C0G0 2248 aa14.6□□□□□ -0.07
HDAC4-213ENST00000496347 TMEM200CA6NKL6 621 aa14.6□□□□□ -0.07
HDAC4-213ENST00000496347 NPIPA5E9PKD4 350 aa14.6□□□□□ -0.07
HDAC4-213ENST00000496347 EEDO75530 441 aaKnown RBP14.6□□□□□ -0.07
HDAC4-213ENST00000496347 ETHE1O95571 254 aa14.6□□□□□ -0.07
HDAC4-213ENST00000496347 TNNI3P19429 210 aa14.6□□□□□ -0.07
HDAC4-213ENST00000496347 BSGP35613 385 aa14.6□□□□□ -0.07
HDAC4-213ENST00000496347 MEOX1P50221 254 aa14.6□□□□□ -0.07
HDAC4-213ENST00000496347 HK2P52789 917 aa14.6□□□□□ -0.07
HDAC4-213ENST00000496347 RNF4P78317 190 aa14.6□□□□□ -0.07
HDAC4-213ENST00000496347 ID2Q02363 134 aa14.6□□□□□ -0.07
HDAC4-213ENST00000496347 IFT88Q13099 833 aa14.6□□□□□ -0.07
HDAC4-213ENST00000496347 OR52E8Q6IFG1 317 aa14.6□□□□□ -0.07
HDAC4-213ENST00000496347 MRM1Q6IN84 353 aaKnown RBP14.6□□□□□ -0.07
HDAC4-213ENST00000496347 ADGRD1Q6QNK2 874 aa14.6□□□□□ -0.07
HDAC4-213ENST00000496347 CYP20A1Q6UW02 462 aa14.6□□□□□ -0.07
HDAC4-213ENST00000496347 BNC2Q6ZN30 1099 aaPredicted RBP14.6□□□□□ -0.07
HDAC4-213ENST00000496347 Q6ZPB1 254 aaPredicted RBP14.6□□□□□ -0.07
HDAC4-213ENST00000496347 ST13P4Q8IZP2 240 aaPredicted RBP14.6□□□□□ -0.07
HDAC4-213ENST00000496347 ZFP62Q8NB50 900 aaPredicted RBP14.6□□□□□ -0.07
HDAC4-213ENST00000496347 PSD4Q8NDX1 1056 aa14.6□□□□□ -0.07
HDAC4-213ENST00000496347 NUBPLQ8TB37 319 aa14.6□□□□□ -0.07
HDAC4-213ENST00000496347 ZNF483Q8TF39 744 aaPredicted RBP14.6□□□□□ -0.07
HDAC4-213ENST00000496347 FBXL20Q96IG2 436 aa14.6□□□□□ -0.07
HDAC4-213ENST00000496347 NSUN5Q96P11 429 aaKnown RBP14.6□□□□□ -0.07
HDAC4-213ENST00000496347 CDK15Q96Q40 435 aa14.6□□□□□ -0.07
HDAC4-213ENST00000496347 RASL10BQ96S79 203 aa14.6□□□□□ -0.07
HDAC4-213ENST00000496347 TSPAN10Q9H1Z9 355 aaPredicted RBP14.6□□□□□ -0.07
HDAC4-213ENST00000496347 ELOVL6Q9H5J4 265 aa14.6□□□□□ -0.07
HDAC4-213ENST00000496347 WDR41Q9HAD4 459 aa14.6□□□□□ -0.07
HDAC4-213ENST00000496347 ZBTB26Q9HCK0 441 aa14.6□□□□□ -0.07
HDAC4-213ENST00000496347 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.6□□□□□ -0.07
HDAC4-213ENST00000496347 PSMC3IPQ9P2W1 217 aaPredicted RBP14.6□□□□□ -0.07
HDAC4-213ENST00000496347 ADAM29Q9UKF5 820 aa14.6□□□□□ -0.07
HDAC4-213ENST00000496347 NPIPA1Q9UND3 350 aa14.6□□□□□ -0.07
HDAC4-213ENST00000496347 ERVK-11Q9UQG0 969 aa14.6□□□□□ -0.07
HDAC4-213ENST00000496347 ZNF835Q9Y2P0 537 aa14.6□□□□□ -0.07
HDAC4-213ENST00000496347 IQANK1A0A1B0GTG1 560 aa14.59□□□□□ -0.07
HDAC4-213ENST00000496347 A8MT66 165 aa14.59□□□□□ -0.07
HDAC4-213ENST00000496347 TFECO14948 347 aaPredicted RBP14.59□□□□□ -0.07
HDAC4-213ENST00000496347 PROM1O43490 865 aa14.59□□□□□ -0.07
HDAC4-213ENST00000496347 TMPRSS11DO60235 418 aa14.59□□□□□ -0.07
HDAC4-213ENST00000496347 AIFM1O95831 613 aa14.59□□□□□ -0.07
HDAC4-213ENST00000496347 IGKV3-11P04433 115 aa14.59□□□□□ -0.07
HDAC4-213ENST00000496347 FAM58BPP0C7Q3 252 aa14.59□□□□□ -0.07
HDAC4-213ENST00000496347 ALOX15P16050 662 aaPredicted RBP14.59□□□□□ -0.07
HDAC4-213ENST00000496347 GCAP28676 217 aa14.59□□□□□ -0.07
HDAC4-213ENST00000496347 HERVK_113P63132 956 aa14.59□□□□□ -0.07
HDAC4-213ENST00000496347 SPRED3Q2MJR0 410 aa14.59□□□□□ -0.07
HDAC4-213ENST00000496347 C18orf63Q68DL7 685 aa14.59□□□□□ -0.07
HDAC4-213ENST00000496347 TTC19Q6DKK2 380 aaPredicted RBP14.59□□□□□ -0.07
HDAC4-213ENST00000496347 HIST2H2BCQ6DN03 193 aa14.59□□□□□ -0.07
HDAC4-213ENST00000496347 EIF1ADQ8N9N8 165 aaKnown RBP14.59□□□□□ -0.07
HDAC4-213ENST00000496347 GOLM1Q8NBJ4 401 aa14.59□□□□□ -0.07
HDAC4-213ENST00000496347 ACMSDQ8TDX5 336 aa14.59□□□□□ -0.07
HDAC4-213ENST00000496347 ZNF721Q8TF20 911 aa14.59□□□□□ -0.07
HDAC4-213ENST00000496347 RBM18Q96H35 190 aaKnown RBP14.59□□□□□ -0.07
HDAC4-213ENST00000496347 CCDC120Q96HB5 630 aa14.59□□□□□ -0.07
HDAC4-213ENST00000496347 ERVK-6Q9BXR3 956 aa14.59□□□□□ -0.07
HDAC4-213ENST00000496347 TXLNGYQ9BZA5 131 aa14.59□□□□□ -0.07
HDAC4-213ENST00000496347 SEMA4BQ9NPR2 832 aaPredicted RBP14.59□□□□□ -0.07
HDAC4-213ENST00000496347 ASB4Q9Y574 426 aa14.59□□□□□ -0.07
HDAC4-213ENST00000496347 WWP2O00308 870 aa14.58□□□□□ -0.08
HDAC4-213ENST00000496347 CCL21O00585 134 aa14.58□□□□□ -0.08
HDAC4-213ENST00000496347 ASNA1O43681 348 aa14.58□□□□□ -0.08
HDAC4-213ENST00000496347 PEX1O43933 1283 aa14.58□□□□□ -0.08
HDAC4-213ENST00000496347 OR10H2O60403 315 aa14.58□□□□□ -0.08
HDAC4-213ENST00000496347 OR6B1O95007 311 aa14.58□□□□□ -0.08
HDAC4-213ENST00000496347 GPR75O95800 540 aa14.58□□□□□ -0.08
HDAC4-213ENST00000496347 SBK3P0C264 359 aa14.58□□□□□ -0.08
HDAC4-213ENST00000496347 RHOXF2BP0C7M4 288 aa14.58□□□□□ -0.08
HDAC4-213ENST00000496347 TAC1P20366 129 aa14.58□□□□□ -0.08
HDAC4-213ENST00000496347 DCTP40126 519 aa14.58□□□□□ -0.08
HDAC4-213ENST00000496347 SOX3P41225 446 aa14.58□□□□□ -0.08
HDAC4-213ENST00000496347 NEK2P51955 445 aa14.58□□□□□ -0.08
HDAC4-213ENST00000496347 SRSF11Q05519 484 aaKnown RBP14.58□□□□□ -0.08
HDAC4-213ENST00000496347 MPEG1Q2M385 716 aa14.58□□□□□ -0.08
HDAC4-213ENST00000496347 RNFT1Q5M7Z0 435 aa14.58□□□□□ -0.08
HDAC4-213ENST00000496347 RTL4Q6ZR62 310 aa14.58□□□□□ -0.08
HDAC4-213ENST00000496347 PAGE2Q7Z2X7 111 aa14.58□□□□□ -0.08
HDAC4-213ENST00000496347 MDGA2Q7Z553 956 aa14.58□□□□□ -0.08
HDAC4-213ENST00000496347 SPPL2CQ8IUH8 684 aa14.58□□□□□ -0.08
HDAC4-213ENST00000496347 SULF2Q8IWU5 870 aa14.58□□□□□ -0.08
HDAC4-213ENST00000496347 TMEM151AQ8N4L1 468 aa14.58□□□□□ -0.08
HDAC4-213ENST00000496347 ZNF808Q8N4W9 903 aaPredicted RBP14.58□□□□□ -0.08
HDAC4-213ENST00000496347 ZNF321PQ8N8H1 164 aa14.58□□□□□ -0.08
HDAC4-213ENST00000496347 MYRIPQ8NFW9 859 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms