RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 PADI2Q9Y2J8 665 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 SAMHD1Q9Y3Z3 626 aaKnown RBP6.58□□□□□ -1.36
USP39-219ENST00000496047 PCYT1BQ9Y5K3 369 aaPredicted RBP6.58□□□□□ -1.36
USP39-219ENST00000496047 AK5Q9Y6K8 562 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 ZNF780BQ9Y6R6 833 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 COMMD3-BMI1R4GMX3 469 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 HSPE1-MOB4S4R3N1 261 aa6.58□□□□□ -1.36
USP39-219ENST00000496047 COL5A1P20908 1838 aaPredicted RBP6.57□□□□□ -1.36
USP39-219ENST00000496047 UNC79Q9P2D8 2635 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 A0A0A6YYD5 115 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 POM121BA6NF01 834 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 PRR19A6NJB7 356 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 CHURC1-FNTBB4DL54 471 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 H3BQ06 376 aaPredicted RBP6.57□□□□□ -1.36
USP39-219ENST00000496047 hCG_2039718K7EN88 272 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 BCKDKO14874 412 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 HAT1O14929 419 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 LATO43561 262 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 AHCYL1O43865 530 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 SERPINB7O75635 380 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 SNAP29O95721 258 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 AGR2O95994 175 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 IGLV3-19P01714 112 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 IFNW1P05000 195 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 SMIM18P0DKX4 95 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 NR2F6P10588 404 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 ETFAP13804 333 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 ANXA8P13928 327 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 CSNK2A2P19784 350 aaPredicted RBP6.57□□□□□ -1.36
USP39-219ENST00000496047 EFNA1P20827 205 aaPredicted RBP6.57□□□□□ -1.36
USP39-219ENST00000496047 HIST1H1TP22492 207 aaPredicted RBP6.57□□□□□ -1.36
USP39-219ENST00000496047 CD6P30203 668 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 ACSL1P33121 698 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 MPIP34949 423 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 LTBRP36941 435 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 DCTP40126 519 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 BCL6P41182 706 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 NCBP2P52298 156 aaKnown RBP eCLIP6.57□□□□□ -1.36
USP39-219ENST00000496047 PLA2G16P53816 162 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 CLDN2P57739 230 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 NUP107P57740 925 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 SELENOWP63302 87 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 YBX1P67809 324 aaKnown RBP6.57□□□□□ -1.36
USP39-219ENST00000496047 ADARB1P78563 741 aaKnown RBP6.57□□□□□ -1.36
USP39-219ENST00000496047 PPP2R2BQ00005 443 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 MC1RQ01726 317 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 SPIBQ01892 262 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 SLC14A1Q13336 389 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 TDGQ13569 410 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 CCINQ13939 588 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 KEAP1Q14145 624 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 SLC5A12Q1EHB4 618 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 ATAD3BQ5T9A4 648 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 NDUFAF5Q5TEU4 345 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 BROXQ5VW32 411 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 SAXO2Q658L1 398 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 BORAQ6PGQ7 559 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 CEACAM20Q6UY09 585 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 TMEM64Q6YI46 380 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 Q6ZSR6 202 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 SYT13Q7L8C5 426 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 VN1R5Q7Z5H4 357 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 PARGQ86W56 976 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 RNF130Q86XS8 419 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 NRROSQ86YC3 692 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 GJD3Q8N144 294 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 LINC01555Q8NAE3 123 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 PIK3C3Q8NEB9 887 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 PJA1Q8NG27 643 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 OR4E2Q8NGC2 313 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 OR5AK3PQ8NH89 298 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 BBS10Q8TAM1 723 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 FAM110BQ8TC76 370 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 NT5CQ8TCD5 201 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 NUDT8Q8WV74 236 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 HDAC2Q92769 488 aaKnown RBP6.57□□□□□ -1.36
USP39-219ENST00000496047 TSACCQ96A04 125 aaPredicted RBP6.57□□□□□ -1.36
USP39-219ENST00000496047 TM4SF18Q96CE8 201 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 DGCR14Q96DF8 476 aaKnown RBP6.57□□□□□ -1.36
USP39-219ENST00000496047 KLHDC7BQ96G42 594 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 SPACA7Q96KW9 195 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 CCDC3Q9BQI4 270 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 PCED1AQ9H1Q7 454 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 ADNPQ9H2P0 1102 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 TOR3AQ9H497 397 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 UBE2ZQ9H832 354 aaPredicted RBP6.57□□□□□ -1.36
USP39-219ENST00000496047 SLC6A20Q9NP91 592 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 CCNB1IP1Q9NPC3 277 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 A4GALTQ9NPC4 353 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 C11orf16Q9NQ32 467 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 SLC35C2Q9NQQ7 365 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 THSD1Q9NS62 852 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 EXD2Q9NVH0 621 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 SCN3BQ9NY72 215 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 UBAP1Q9NZ09 502 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 PTTG2Q9NZH5 202 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 PDP1Q9P0J1 537 aaPredicted RBP6.57□□□□□ -1.36
USP39-219ENST00000496047 SLC13A4Q9UKG4 626 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 CYP8B1Q9UNU6 501 aa6.57□□□□□ -1.36
USP39-219ENST00000496047 TPRKBQ9Y3C4 175 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms